Gene Symbol | SLC6A17 |
Entrez Gene ID | 407174 |
Full Name | solute carrier family 6 member 17 |
General protein information |
|
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » SLC6A17 cDNA ORF clone
gRNAs
Gene Symbol | SLC6A17 |
Entrez Gene ID | 407174 |
Full Name | solute carrier family 6 member 17 |
General protein information |
|
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
XM_024985254.1 | XP_024841022.1 | sodium-dependent neutral amino acid transporter SLC6A17 isoform X1 |
XM_024985260.1 | XP_024841028.1 | sodium-dependent neutral amino acid transporter SLC6A17 isoform X2 |
NM_001166573.1 | NP_001160045.1 | sodium-dependent neutral amino acid transporter SLC6A17 |
XM_024985257.1 | XP_024841025.1 | sodium-dependent neutral amino acid transporter SLC6A17 isoform X1 |
NM_001166573.2 | NP_001160045.1 | sodium-dependent neutral amino acid transporter SLC6A17 |
XM_024985253.1 | XP_024841021.1 | sodium-dependent neutral amino acid transporter SLC6A17 isoform X1 |
Pan troglodytes (chimpanzee) | SLC6A17 | XP_513652.2 |
Rattus norvegicus (Norway rat) | Slc6a17 | NP_001028251.1 |
Drosophila melanogaster (fruit fly) | CG43066 | NP_611340.1 |
Mus musculus (house mouse) | Slc6a17 | NP_758475.1 |
Gallus gallus (chicken) | SLC6A17 | XP_417942.3 |
SLC6A17 | XP_001099500.1 | |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP011279 | XP_309367.2 |
Xenopus tropicalis (tropical clawed frog) | slc6a17 | XP_002933031.1 |
Homo sapiens (human) | SLC6A17 | NP_001010898.1 |
Bos taurus (cattle) | SLC6A17 | NP_001160045.1 |
Canis lupus familiaris (dog) | SLC6A17 | XP_547236.2 |
Danio rerio (zebrafish) | slc6a17 | NP_001243653.1 |
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle.
Smith TP, Grosse WM, Freking BA, Roberts AJ, Stone RT, Casas E, Wray JE, White J, Cho J, Fahrenkrug SC, Bennett GL, Heaton MP, Laegreid WW, Rohrer GA, Chitko-McKown CG, Pertea G, Holt I, Karamycheva S, Liang F, Quackenbush J, Keele JW
Genome research11(4)626-30(2001 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following SLC6A17 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SLC6A17 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa232504 | |
Clone ID Related Accession (Same CDS sequence) | XM_024985260.1 | |
Accession Version | XM_024985260.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 873bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | sodium-dependent neutral amino acid transporter SLC6A17 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037330.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCGAAGA ACAGCAAGGT GACCCAGCGT GAGCATAGCA ATGAGCACGT CACGGAGTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024841028.1 |
CDS | 472..1344 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCCGAAGA ACAGCAAGGT GACCCAGCGT GAGCATAGCA ATGAGCACGT CACGGAGTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa44530 | |
Clone ID Related Accession (Same CDS sequence) | NM_001166573.1 , NM_001166573.2 | |
Accession Version | NM_001166573.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2184bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2014-12-31 | |
Organism | Bos taurus(Cattle) | |
Product | sodium-dependent neutral amino acid transporter SLC6A17 | |
Comment | PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AAFC03004864.1, AAFC03117818.1 and AAFC03004863.1. On Oct 28, 2009 this sequence version replaced XM_591007.3. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. |
1 | ATGCCGAAGA ACAGCAAGGT GACCCAGCGT GAGCATAGCA ATGAGCACGT CACGGAGTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001160045.1 |
CDS | 1..2184 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCGAAGA ACAGCAAGGT GACCCAGCGT GAGCATAGCA ATGAGCACGT CACGGAGTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa44530 | |
Clone ID Related Accession (Same CDS sequence) | NM_001166573.1 , NM_001166573.2 | |
Accession Version | NM_001166573.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2184bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-13 | |
Organism | Bos taurus(cattle) | |
Product | sodium-dependent neutral amino acid transporter SLC6A17 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DAAA02007555.1, EE231232.1, BI681242.1 and DAAA02007554.1. On Aug 24, 2017 this sequence version replaced NM_001166573.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMN03145413, SAMN03145414 [ECO:0000350] ##Evidence-Data-END## ##RefSeq-Attributes-START## inferred exon combination :: based on alignments, homology ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCCGAAGA ACAGCAAGGT GACCCAGCGT GAGCATAGCA ATGAGCACGT CACGGAGTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001160045.1 |
CDS | 1..2184 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCGAAGA ACAGCAAGGT GACCCAGCGT GAGCATAGCA ATGAGCACGT CACGGAGTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa232503 | |
Clone ID Related Accession (Same CDS sequence) | XM_024985254.1 , XM_024985257.1 , XM_024985253.1 | |
Accession Version | XM_024985254.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2184bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | sodium-dependent neutral amino acid transporter SLC6A17 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037330.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCGAAGA ACAGCAAGGT GACCCAGCGT GAGCATAGCA ATGAGCACGT CACGGAGTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024841022.1 |
CDS | 224..2407 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCGAAGA ACAGCAAGGT GACCCAGCGT GAGCATAGCA ATGAGCACGT CACGGAGTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa232503 | |
Clone ID Related Accession (Same CDS sequence) | XM_024985254.1 , XM_024985257.1 , XM_024985253.1 | |
Accession Version | XM_024985257.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2184bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | sodium-dependent neutral amino acid transporter SLC6A17 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037330.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCGAAGA ACAGCAAGGT GACCCAGCGT GAGCATAGCA ATGAGCACGT CACGGAGTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024841025.1 |
CDS | 110..2293 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCGAAGA ACAGCAAGGT GACCCAGCGT GAGCATAGCA ATGAGCACGT CACGGAGTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa232503 | |
Clone ID Related Accession (Same CDS sequence) | XM_024985254.1 , XM_024985257.1 , XM_024985253.1 | |
Accession Version | XM_024985253.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2184bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | sodium-dependent neutral amino acid transporter SLC6A17 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037330.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCGAAGA ACAGCAAGGT GACCCAGCGT GAGCATAGCA ATGAGCACGT CACGGAGTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024841021.1 |
CDS | 527..2710 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCGAAGA ACAGCAAGGT GACCCAGCGT GAGCATAGCA ATGAGCACGT CACGGAGTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A whole-genome assembly of the domestic cow, Bos taurus. |
Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. |