Gene Symbol |
CLIC3 |
Entrez Gene ID |
505436 |
Full Name |
chloride intracellular channel 3 |
General protein information |
- Preferred Names
chloride intracellular channel 3
Names
chloride intracellular channel protein 3
|
Gene Type |
protein-coding |
Organism |
Bos taurus(cattle) |
mRNA and Protein(s)
mRNA |
Protein |
Name |
XM_024998389.1 |
XP_024854157.1 |
chloride intracellular channel protein 3 isoform X1 |
NM_001100301.2 |
NP_001093771.1 |
chloride intracellular channel protein 3 |
Homo sapiens (human) |
CLIC3 |
NP_004660.2 |
Canis lupus familiaris (dog) |
CLIC3 |
XP_848692.1 |
Gallus gallus (chicken) |
LOC417293 |
XP_003642297.2 |
Xenopus tropicalis (tropical clawed frog) |
clic3 |
XP_002942018.1 |
Bos taurus (cattle) |
CLIC3 |
NP_001093771.1 |
Mus musculus (house mouse) |
Clic3 |
NP_081361.1 |
Danio rerio (zebrafish) |
clica |
NP_955818.1 |
Pan troglodytes (chimpanzee) |
CLIC3 |
XP_520422.2 |
Rattus norvegicus (Norway rat) |
Clic3 |
NP_001013098.2 |
|
LOC721634 |
XP_002808137.1 |
Related articles in PubMed
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following CLIC3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CLIC3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
OBa36488 |
Clone ID Related Accession (Same CDS sequence) |
NM_001100301.2
|
Accession Version |
NM_001100301.2 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 714bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-13 |
Organism |
Bos taurus(cattle) |
Product |
chloride intracellular channel protein 3 |
Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC147880.1. On Aug 30, 2012 this sequence version replaced NM_001100301.1.
##Evidence-Data-START##
Transcript exon combination :: BC147880.1, EH210203.1 [ECO:0000332]
RNAseq introns :: mixed/partial sample support SAMN03145412, SAMN03145413 [ECO:0000350]
##Evidence-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661
| ATGGCTGAGG CCGGCAAGCT CCAGCTCTTC GTCAAGGCCA GTGAGGACGG CGAGAGTGTG GGCCACTGCC CCTCCTGCCA GAGGCTCTTC ATGATTCTGC TTCTCAAGGG CGTGCCCTTC ACACTCACCA CCGTGGACAC CCGCAGGTCC CCGGAGGTGC TGAAGGACTT CGCCCCAGGC TCCCAGCTGC CCATCCTGCT CTGCGACGGC GACGCCAAAA CCGACACGCT GCAGATCGAG GAGTTTCTGG AGGAGACGCT GGGGCCCCCA GAATTCCCCA GCTTGGCGCC CAGATACAGG GAGTCTACCG CAGCGGGCAA CGACGTCTTT CACAAGTTCT CCGCCTTCAT CAAGAACCCA GTGCCCGCAC AGGACGACGC TCTGTACCAG CAGCTGCTGC GCGCCCTCGC CAAGCTGGAC AGCTACCTGC GCGCGCCCCT GGAGCACGAG CTGGGCCGCG AGCCGCAGCT GCGCGAGTCC CGCCGCCGCT TTCTGGACGG CGATCAGCTC ACGCTGGCCG ACTGCGGCCT GCTGCCCAAG CTGCACGTCG TGAACACGGT GTGCGCGCAC TTCCGCCAAG CTCCCATCCC CGCTGAGCTG CGCGGCCTCC GCCGCTACTT GGACTGCGCC CTGCAGGAGA AGGAGTTCAA GTACACGTGT CCCCACAGCG CCGAGATCCT GGCGGCGTAC CGGCCCGTCG TGCGCCCCCG CTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001093771.1 |
CDS | 19..732 |
Translation | |
Target ORF information:
RefSeq Version | NM_001100301.2 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus chloride intracellular channel 3 (CLIC3), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001100301.2 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661
| ATGGCTGAGG CCGGCAAGCT CCAGCTCTTC GTCAAGGCCA GTGAGGACGG CGAGAGTGTG GGCCACTGCC CCTCCTGCCA GAGGCTCTTC ATGATTCTGC TTCTCAAGGG CGTGCCCTTC ACACTCACCA CCGTGGACAC CCGCAGGTCC CCGGAGGTGC TGAAGGACTT CGCCCCAGGC TCCCAGCTGC CCATCCTGCT CTGCGACGGC GACGCCAAAA CCGACACGCT GCAGATCGAG GAGTTTCTGG AGGAGACGCT GGGGCCCCCA GAATTCCCCA GCTTGGCGCC CAGATACAGG GAGTCTACCG CAGCGGGCAA CGACGTCTTT CACAAGTTCT CCGCCTTCAT CAAGAACCCA GTGCCCGCAC AGGACGACGC TCTGTACCAG CAGCTGCTGC GCGCCCTCGC CAAGCTGGAC AGCTACCTGC GCGCGCCCCT GGAGCACGAG CTGGGCCGCG AGCCGCAGCT GCGCGAGTCC CGCCGCCGCT TTCTGGACGG CGATCAGCTC ACGCTGGCCG ACTGCGGCCT GCTGCCCAAG CTGCACGTCG TGAACACGGT GTGCGCGCAC TTCCGCCAAG CTCCCATCCC CGCTGAGCTG CGCGGCCTCC GCCGCTACTT GGACTGCGCC CTGCAGGAGA AGGAGTTCAA GTACACGTGT CCCCACAGCG CCGAGATCCT GGCGGCGTAC CGGCCCGTCG TGCGCCCCCG CTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa46242 |
Clone ID Related Accession (Same CDS sequence) |
XM_024998389.1
|
Accession Version |
XM_024998389.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 624bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-06 |
Organism |
Bos taurus(cattle) |
Product |
chloride intracellular channel protein 3 isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037338.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Bos taurus Annotation Release 106
Annotation Version :: 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601
| ATGATTCTGC TTCTCAAGGG CGTGCCCTTC ACACTCACCA CCGTGGACAC CCGCAGGTCC CCGGAGGTGC TGAAGGACTT CGCCCCAGGC TCCCAGCTGC CCATCCTGCT CTGCGACGGC GACGCCAAAA CCGACACGCT GCAGATCGAG GAGTTTCTGG AGGAGACGCT GGGGCCCCCA GAATTCCCCA GCTTGGCGCC CAGATACAGG GAGTCTACCG CAGCGGGCAA CGACGTCTTT CACAAGTTCT CCGCCTTCAT CAAGAACCCA GTGCCCGCAC AGGACGACGC TCTGTACCAG CAGCTGCTGC GCGCCCTCGC CAAGCTGGAC AGCTACCTGC GCGCGCCCCT GGAGCACGAG CTGGGCCGCG AGCCGCAGCT GCGCGAGTCC CGCCGCCGCT TTCTGGACGG CGATCAGCTC ACGCTGGCCG ACTGCGGCCT GCTGCCCAAG CTGCACGTCG TGAACACGGT GTGCGCGCAC TTCCGCCAAG CTCCCATCCC CGCTGAGCTG CGCGGCCTCC GCCGCTACTT GGACTGCGCC CTGCAGGAGA AGGAGTTCAA GTACACGTGT CCCCACAGCG CCGAGATCCT GGCGGCGTAC CGGCCCGTCG TGCGCCCCCG CTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_024854157.1 |
CDS | 104..727 |
Translation | |
Target ORF information:
RefSeq Version | XM_024998389.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus chloride intracellular channel 3 (CLIC3), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_024998389.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601
| ATGATTCTGC TTCTCAAGGG CGTGCCCTTC ACACTCACCA CCGTGGACAC CCGCAGGTCC CCGGAGGTGC TGAAGGACTT CGCCCCAGGC TCCCAGCTGC CCATCCTGCT CTGCGACGGC GACGCCAAAA CCGACACGCT GCAGATCGAG GAGTTTCTGG AGGAGACGCT GGGGCCCCCA GAATTCCCCA GCTTGGCGCC CAGATACAGG GAGTCTACCG CAGCGGGCAA CGACGTCTTT CACAAGTTCT CCGCCTTCAT CAAGAACCCA GTGCCCGCAC AGGACGACGC TCTGTACCAG CAGCTGCTGC GCGCCCTCGC CAAGCTGGAC AGCTACCTGC GCGCGCCCCT GGAGCACGAG CTGGGCCGCG AGCCGCAGCT GCGCGAGTCC CGCCGCCGCT TTCTGGACGG CGATCAGCTC ACGCTGGCCG ACTGCGGCCT GCTGCCCAAG CTGCACGTCG TGAACACGGT GTGCGCGCAC TTCCGCCAAG CTCCCATCCC CGCTGAGCTG CGCGGCCTCC GCCGCTACTT GGACTGCGCC CTGCAGGAGA AGGAGTTCAA GTACACGTGT CCCCACAGCG CCGAGATCCT GGCGGCGTAC CGGCCCGTCG TGCGCCCCCG CTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
A whole-genome assembly of the domestic cow, Bos taurus.
Genome biology10(4)R42(2009)
Zimin AV,Delcher AL,Florea L,Kelley DR,Schatz MC,Puiu D,Hanrahan F,Pertea G,Van Tassell CP,Sonstegard TS,Mar?ais G,Roberts M,Subramanian P,Yorke JA,Salzberg SL |