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COL9A2 cDNA ORF clone, Bos taurus(cattle)

Summary

Gene Symbol COL9A2
Entrez Gene ID 505942
Full Name collagen type IX alpha 2 chain
General protein information
Preferred Names

collagen type IX alpha 2 chain

Names

collagen alpha-2(IX) chain
collagen, type IX, alpha 2
Gene Type protein-coding
Organism Bos taurus(cattle)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_015466616.1 XP_015322102.1 collagen alpha-2(IX) chain isoform X1
XM_024990221.1 XP_024845989.1 collagen alpha-2(IX) chain
XM_015462832.1 XP_015318318.1 collagen alpha-2(IX) chain isoform X2

Pathways from BioSystems


Homologies


Pan troglodytes (chimpanzee) COL9A2 XP_003949434.1
Canis lupus familiaris (dog) COL9A2 NP_001184099.1
Xenopus tropicalis (tropical clawed frog) col9a2 NP_001090661.1
COL9A2 XP_001082953.2
Bos taurus (cattle) COL9A2 XP_002686588.2
Mus musculus (house mouse) Col9a2 NP_031767.2
Rattus norvegicus (Norway rat) Col9a2 NP_001102145.1
Danio rerio (zebrafish) col9a2 NP_997744.1
Gallus gallus (chicken) COL9A2 NP_001258917.1
Homo sapiens (human) COL9A2 NP_001843.1

Gene Ontology

The following COL9A2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the COL9A2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OBa03646 XM_024990221.1
Latest version!		 Bos taurus collagen type IX alpha 2 chain (COL9A2), mRNA. pcDNA3.1+/C-(K)DYK or customized vector TBD $426.30
$609.00
OBa89625 XM_015462832.1
Latest version!		 Bos taurus collagen type IX alpha 2 (COL9A2), transcript variant X2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector TBD $426.30
$609.00
OBa90531 XM_015466616.1
Latest version!		 Bos taurus collagen type IX alpha 2 (COL9A2), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector TBD $426.30
$609.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone 30% OFF
2-4 Clone 40% OFF
5 or more Clone 50% OFF
All Other ORF Clones
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OBa03646
Clone ID Related Accession (Same CDS sequence) XM_024990221.1
Accession Version XM_024990221.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 2067bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-05-06
Organism Bos taurus(cattle)
Product collagen alpha-2(IX) chain
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037330.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
ATGGCCCCCG CGGCCGACCC CCGTAGCCTC CTGGTTCTCC TGCAGGTGCT GGGGCTCGCC 
CTGGCGCAGA TCAGAGGTCT GCCAGGAGAG CCGGGGCCTC CGGGGCCCCC AGGGCCACCG 
GGAGTGCCTG GATCCGACGG AATCGACGGT GACAAAGGGC CCCCTGGGAA AGCTGGCCCT 
CCGGGACCTA AGGGAGAGCC TGGCAAAGCA GGAACAGATG GGCCAGACGG GAAGCCCGGG 
ATAGATGGTC TAACTGGAGC CAAGGGGGAG CCCGGTCCTG CAGGGATCCC TGGAGTCAAG 
GGCCAGCCTG GGCTCCCAGG TCCCCCCGGC CTGCCGGGCC CTGGCTTCGC CGGACCTCCT 
GGACCACCTG GACCTGTTGG CCTCCCTGGT GAGATTGGAC TCACAGGCCC CAAGGGGGAT 
CCTGGACCAG AGGGACCATC AGGGCCTCCG GGACCCCCTG GGAAACCGGG CCGCCCTGGA 
ACCATTCAGG GTCTGGAAGG CAGCGCGGAT TTCCTGTGTC CAACCAACTG TCCAGCGGGC 
GTGAAAGGGC CCCCAGGGCT GCAGGGCGTG AAGGGGCATC CAGGCAGACG CGGGCTTCTG 
GGAGATTCCG GCCGCCAGGG GAAGCCGGGT CCCAAGGGAG ATGTGGGTGC CTCTGGAGAG 
CAAGGCATCC CTGGACCACC GGGTCCCCAG GGTGTCAGGG GCTACCCAGG CATGGCAGGA 
CCCAAAGGAG AGACGGGCCC TCAGGGGTAC AAAGGCATGG TGGGCTCCGT CGGCGCAGCC 
GGGTCACCTG GTGAGGAAGG TCCACGGGGA CCACCGGGCC GAGCTGGAGA GAAGGGTGAT 
GTGGGGAGCC AAGGAGTTCG AGGACCCCAG GGAATAACAG GCCCAAAGGG AGCAACCGGA 
CCCCCAGGCA TCGACGGCAA GGATGGGACC CCAGGCACGC CTGGAGTGAA GGGCAGTGCA 
GGACAGGCAG GGCGGCCGGG AAACCCAGGC CACCAGGGCC TAGCGGGTGT GCCTGGTATG 
CCTGGGACAA AAGGAGGCCC TGGAGACAAG GGTGAGCCGG GCCGGCAGGG CTTCCCTGGA 
GTCTCTGGTC CCCCCGGGAA GGAGGGAGAG CCAGGGCCTC GAGGAGAAAT CGGTCCCCAG 
GGCATCATGG GGCAGAAGGG TGACCACGGT GAGAGGGGGC CAGTGGGGCA GCCAGGCCCT 
CAAGGTCGGC AGGGCCCCAA AGGGGAACAG GGTCCTCCCG GAATTCCAGG GCCCCAAGGC 
TTGCCAGGCA TCAAGGGAGA CAAGGGTTCC CCAGGGAAGA CCGGGCCCCG CGGTGGAGTG 
GGCGACCCGG GGGTGGCTGG CCTCCCAGGA GAGAAAGGCG AGAAGGGCGA GTCAGGCGAG 
CCAGGCCCCA AGGGACAGCA AGGAGTCCGC GGAGAACCTG GCTACCCCGG CCCCAGCGGA 
GATGCGGGCG CCCCGGGGGT GCAGGGCTAC CCGGGGCCTC CGGGCCCTCG AGGACTGGTT 
GGAGACCGAG GCTTGCCCGG ACAGCCCGGG AGGCAGGGCG TGGCGGGCCG AGATGCTAGT 
GACCAGCACA TAGAGGACGT GGTGCTGAAG ATGCTGCAAG AGCAATTGGC AGAAATGGCT 
GTGAGTGCCA AGCGGGAGGC CCTGGGTGCG ACTGGGATGA TGGGTCCCCC AGGACCCCCT 
GGGCCTCCTG GGTACCCAGG CAAACAGGGA CCCCATGGGC ACCCTGGCCC TCGGGGTGTT 
CCTGGCATCG TGGGAGCCGT GGGTCAGATT GGCAACACTG GGCCCAAGGG AAAACGTGGA 
GAGAAGGGTG ATCAGGGAGA AGTTGGCCGT GGGCACCCCG GGATGCCTGG GCCCCCGGGG 
ATCCCAGGAC TGCCTGGCCG GCCTGGTCAG GCAATCAACG GCAAAGATGG AGATCGAGGG 
GCTCCAGGGG CCCCAGGAGA GGCAGGTCGA CCTGGCCTGC CAGGCCCCAT TGGGCTGCCA 
GGCTTCTGTG AACCTGCGGC CTGCCTTGGA GCCTCAGCCT ATGCCTCTGG ACGCCTCACG 
GAGCCTGGAT CCATCAAGGG GCCATGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_024845989.1
CDS150..2216
Translation

Target ORF information:

RefSeq Version XM_024990221.1
Organism Bos taurus(cattle)
Definition Bos taurus collagen type IX alpha 2 chain (COL9A2), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_024990221.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
ATGGCCCCCG CGGCCGACCC CCGTAGCCTC CTGGTTCTCC TGCAGGTGCT GGGGCTCGCC 
CTGGCGCAGA TCAGAGGTCT GCCAGGAGAG CCGGGGCCTC CGGGGCCCCC AGGGCCACCG 
GGAGTGCCTG GATCCGACGG AATCGACGGT GACAAAGGGC CCCCTGGGAA AGCTGGCCCT 
CCGGGACCTA AGGGAGAGCC TGGCAAAGCA GGAACAGATG GGCCAGACGG GAAGCCCGGG 
ATAGATGGTC TAACTGGAGC CAAGGGGGAG CCCGGTCCTG CAGGGATCCC TGGAGTCAAG 
GGCCAGCCTG GGCTCCCAGG TCCCCCCGGC CTGCCGGGCC CTGGCTTCGC CGGACCTCCT 
GGACCACCTG GACCTGTTGG CCTCCCTGGT GAGATTGGAC TCACAGGCCC CAAGGGGGAT 
CCTGGACCAG AGGGACCATC AGGGCCTCCG GGACCCCCTG GGAAACCGGG CCGCCCTGGA 
ACCATTCAGG GTCTGGAAGG CAGCGCGGAT TTCCTGTGTC CAACCAACTG TCCAGCGGGC 
GTGAAAGGGC CCCCAGGGCT GCAGGGCGTG AAGGGGCATC CAGGCAGACG CGGGCTTCTG 
GGAGATTCCG GCCGCCAGGG GAAGCCGGGT CCCAAGGGAG ATGTGGGTGC CTCTGGAGAG 
CAAGGCATCC CTGGACCACC GGGTCCCCAG GGTGTCAGGG GCTACCCAGG CATGGCAGGA 
CCCAAAGGAG AGACGGGCCC TCAGGGGTAC AAAGGCATGG TGGGCTCCGT CGGCGCAGCC 
GGGTCACCTG GTGAGGAAGG TCCACGGGGA CCACCGGGCC GAGCTGGAGA GAAGGGTGAT 
GTGGGGAGCC AAGGAGTTCG AGGACCCCAG GGAATAACAG GCCCAAAGGG AGCAACCGGA 
CCCCCAGGCA TCGACGGCAA GGATGGGACC CCAGGCACGC CTGGAGTGAA GGGCAGTGCA 
GGACAGGCAG GGCGGCCGGG AAACCCAGGC CACCAGGGCC TAGCGGGTGT GCCTGGTATG 
CCTGGGACAA AAGGAGGCCC TGGAGACAAG GGTGAGCCGG GCCGGCAGGG CTTCCCTGGA 
GTCTCTGGTC CCCCCGGGAA GGAGGGAGAG CCAGGGCCTC GAGGAGAAAT CGGTCCCCAG 
GGCATCATGG GGCAGAAGGG TGACCACGGT GAGAGGGGGC CAGTGGGGCA GCCAGGCCCT 
CAAGGTCGGC AGGGCCCCAA AGGGGAACAG GGTCCTCCCG GAATTCCAGG GCCCCAAGGC 
TTGCCAGGCA TCAAGGGAGA CAAGGGTTCC CCAGGGAAGA CCGGGCCCCG CGGTGGAGTG 
GGCGACCCGG GGGTGGCTGG CCTCCCAGGA GAGAAAGGCG AGAAGGGCGA GTCAGGCGAG 
CCAGGCCCCA AGGGACAGCA AGGAGTCCGC GGAGAACCTG GCTACCCCGG CCCCAGCGGA 
GATGCGGGCG CCCCGGGGGT GCAGGGCTAC CCGGGGCCTC CGGGCCCTCG AGGACTGGTT 
GGAGACCGAG GCTTGCCCGG ACAGCCCGGG AGGCAGGGCG TGGCGGGCCG AGATGCTAGT 
GACCAGCACA TAGAGGACGT GGTGCTGAAG ATGCTGCAAG AGCAATTGGC AGAAATGGCT 
GTGAGTGCCA AGCGGGAGGC CCTGGGTGCG ACTGGGATGA TGGGTCCCCC AGGACCCCCT 
GGGCCTCCTG GGTACCCAGG CAAACAGGGA CCCCATGGGC ACCCTGGCCC TCGGGGTGTT 
CCTGGCATCG TGGGAGCCGT GGGTCAGATT GGCAACACTG GGCCCAAGGG AAAACGTGGA 
GAGAAGGGTG ATCAGGGAGA AGTTGGCCGT GGGCACCCCG GGATGCCTGG GCCCCCGGGG 
ATCCCAGGAC TGCCTGGCCG GCCTGGTCAG GCAATCAACG GCAAAGATGG AGATCGAGGG 
GCTCCAGGGG CCCCAGGAGA GGCAGGTCGA CCTGGCCTGC CAGGCCCCAT TGGGCTGCCA 
GGCTTCTGTG AACCTGCGGC CTGCCTTGGA GCCTCAGCCT ATGCCTCTGG ACGCCTCACG 
GAGCCTGGAT CCATCAAGGG GCCATGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OBa89625
Clone ID Related Accession (Same CDS sequence) XM_015462832.1
Accession Version XM_015462832.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 2070bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-01-25
Organism Bos taurus(cattle)
Product collagen alpha-2(IX) chain isoform X2
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014644667.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
ATGGCCCCCG CGGCCGACCC CCGTAGCCTC CTGGTTCTCC TGCAGGTGCT GGGGCTCGCC 
CTGGCGCAGA TCAGAGGTCT GCCAGGAGAG CCGGGGCCTC CGGGGCCCCC AGGGCCACCG 
GGAGTGCCTG GATCCGACGG AATCGACGGT GACAAAGGGC CCCCTGGGAA AGCTGGCCCT 
CCGGGACCTA AGGGAGAGCC TGGCAAAGCA GGAACAGATG GGCCAGACGG GAAGCCCGGG 
ATAGATGGTC TAACTGGAGC CAAGGGGGAG CCTGGTCCTG CAGGGATCCC TGGAGTCAAG 
GGCCAGCCTG GGCTCCCAGG TCCCCCCGGC CTGCCGGGCC CTGGCTTCGC CGGACCTCCT 
GGACCACCTG GACCTGTTGG CCTCCCTGGT GAGATTGGAC TCACAGGCCC CAAGGGGGAT 
CCTGGACCAG AGGGACCATC AGGGCCTCCG GGACCCCCTG GGAAACCGGG CCGCCCTGGA 
ACCATTCAGG GTCTGGAAGG CAGCGCGGAT TTCCTGTGTC CAACCAACTG TCCAGCGGGC 
GTGAAAGGGC CCCCAGGGCT GCAGGGCGTG AAGGGGCATC CAGGCAGACG CGGGCTTCTG 
GGAGATTCCG GCCGCCAGGG GAAGCCGGGT CCCAAGGGAG ATGTGGGTGC CTCTGGAGAG 
CAAGGCATCC CTGGACCACC GGGTCCCCAG GGTGTCAGGG GCTACCCAGG CATGGCAGGA 
CCCAAAGGAG AGACGGGCCC TCAGGGGTAC AAAGGCATGG TGGGCTCCGT CGGCGCAGCC 
GGGTCACCTG GTGAGGAAGG TCCACGGGGA CCACCGGGCC GAGCTGGAGA GAAGGGTGAT 
GTGGGGAGCC AAGGAGTTCG AGGACCCCAG GGAATAACAG GCCCAAAGGG AGCAACCGGA 
CCCCCAGGCA TCGACGGCAA GGATGGGACC CCAGGCACGC CTGGAGTGAA GGGCAGTGCA 
GGACAGGCAG GGCGGCCGGG AAACCCAGGC CACCAGGGCC TAGCGGGTGT GCCTGGTATG 
CCTGGGACAA AAGGAGGCCC TGGAGACAAG GGTGAGCCAG GCCGGCAGGG CTTCCCTGGA 
GTCTCTGGTC CCCCCGGGAA GGAGGGAGAG CCAGGGCCTC GAGGAGAAAT CGGTCCCCAG 
GGCATCATGG GGCAGAAGGG TGACCACGGT GAGAGGGGGC CAGTGGGGCA GCCAGGCCCT 
CAAGGTCGGC AGGGCCCCAA AGGGGAACAG GGTCCTCCCG GAATTCCAGG GCCCCAAGGC 
TTGCCAGGCA TCAAGGGAGA CAAGGGTTCC CCAGGGAAGA CGCGGCCCCG CGGTGGAGTG 
GTGAGGCGAC CCGGGGGTGC TGGCCTCCCA GGAGAGAAAG GCGAGAAGGG CGAGTCAGGC 
GAGCCAGGCC CCAAGGGACA GCAAGGAGTC CGCGGAGAAC CTGGCTACCC CGGCCCCAGC 
GGAGATGCGG GCGCCCCGGG GGTGCAGGGC TACCCGGGGC CTCCGGGCCC TCGAGGACTG 
GTTGGAGACC GAGGCTTGCC CGGACAGCCC GGGAGGCAGG GCGTGGCGGG CCGAGATGCT 
AGTGACCAGC ACATAGAGGA CGTGGTGCTG AAGATGCTGC AAGAGCAATT GGCAGAAATG 
GCTGTGAGTG CCAAGCGGGA GGCCCTGGGT GCGACTGGGA TGATGGGTCC CCCAGGACCC 
CCTGGGCCTC CTGGGTACCC AGGCAAACAG GGACCCCATG GGCACCCTGG CCCTCGGGGT 
GTTCCTGGCA TCGTGGGAGC CGTGGGTCAG ATTGGCAACA CTGGGCCCAA GGGAAAACGT 
GGAGAGAAGG GTGATCAGGG AGAAGTTGGC CGTGGGCACC CCGGGATGCC TGGGCCCCCG 
GGGATCCCAG GACTGCCTGG CCGGCCTGGT CAGGCAATCA ACGGCAAAGA TGGAGATCGA 
GGGGCTCCAG GGGCCCCAGG AGAGGCAGGT CGACCTGGCC TGCCAGGCCC CATTGGGCTG 
CCAGGCTTCT GTGAACCTGC GGCCTGCCTT GGAGCCTCAG CCTATGCCTC TGGACGCCTC 
ACGGAGCCTG GATCCATCAA GGGGCCATGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_015318318.1
CDS181..2250
Translation

Target ORF information:

RefSeq Version XM_015462832.1
Organism Bos taurus(cattle)
Definition Bos taurus collagen type IX alpha 2 (COL9A2), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_015462832.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
ATGGCCCCCG CGGCCGACCC CCGTAGCCTC CTGGTTCTCC TGCAGGTGCT GGGGCTCGCC 
CTGGCGCAGA TCAGAGGTCT GCCAGGAGAG CCGGGGCCTC CGGGGCCCCC AGGGCCACCG 
GGAGTGCCTG GATCCGACGG AATCGACGGT GACAAAGGGC CCCCTGGGAA AGCTGGCCCT 
CCGGGACCTA AGGGAGAGCC TGGCAAAGCA GGAACAGATG GGCCAGACGG GAAGCCCGGG 
ATAGATGGTC TAACTGGAGC CAAGGGGGAG CCTGGTCCTG CAGGGATCCC TGGAGTCAAG 
GGCCAGCCTG GGCTCCCAGG TCCCCCCGGC CTGCCGGGCC CTGGCTTCGC CGGACCTCCT 
GGACCACCTG GACCTGTTGG CCTCCCTGGT GAGATTGGAC TCACAGGCCC CAAGGGGGAT 
CCTGGACCAG AGGGACCATC AGGGCCTCCG GGACCCCCTG GGAAACCGGG CCGCCCTGGA 
ACCATTCAGG GTCTGGAAGG CAGCGCGGAT TTCCTGTGTC CAACCAACTG TCCAGCGGGC 
GTGAAAGGGC CCCCAGGGCT GCAGGGCGTG AAGGGGCATC CAGGCAGACG CGGGCTTCTG 
GGAGATTCCG GCCGCCAGGG GAAGCCGGGT CCCAAGGGAG ATGTGGGTGC CTCTGGAGAG 
CAAGGCATCC CTGGACCACC GGGTCCCCAG GGTGTCAGGG GCTACCCAGG CATGGCAGGA 
CCCAAAGGAG AGACGGGCCC TCAGGGGTAC AAAGGCATGG TGGGCTCCGT CGGCGCAGCC 
GGGTCACCTG GTGAGGAAGG TCCACGGGGA CCACCGGGCC GAGCTGGAGA GAAGGGTGAT 
GTGGGGAGCC AAGGAGTTCG AGGACCCCAG GGAATAACAG GCCCAAAGGG AGCAACCGGA 
CCCCCAGGCA TCGACGGCAA GGATGGGACC CCAGGCACGC CTGGAGTGAA GGGCAGTGCA 
GGACAGGCAG GGCGGCCGGG AAACCCAGGC CACCAGGGCC TAGCGGGTGT GCCTGGTATG 
CCTGGGACAA AAGGAGGCCC TGGAGACAAG GGTGAGCCAG GCCGGCAGGG CTTCCCTGGA 
GTCTCTGGTC CCCCCGGGAA GGAGGGAGAG CCAGGGCCTC GAGGAGAAAT CGGTCCCCAG 
GGCATCATGG GGCAGAAGGG TGACCACGGT GAGAGGGGGC CAGTGGGGCA GCCAGGCCCT 
CAAGGTCGGC AGGGCCCCAA AGGGGAACAG GGTCCTCCCG GAATTCCAGG GCCCCAAGGC 
TTGCCAGGCA TCAAGGGAGA CAAGGGTTCC CCAGGGAAGA CGCGGCCCCG CGGTGGAGTG 
GTGAGGCGAC CCGGGGGTGC TGGCCTCCCA GGAGAGAAAG GCGAGAAGGG CGAGTCAGGC 
GAGCCAGGCC CCAAGGGACA GCAAGGAGTC CGCGGAGAAC CTGGCTACCC CGGCCCCAGC 
GGAGATGCGG GCGCCCCGGG GGTGCAGGGC TACCCGGGGC CTCCGGGCCC TCGAGGACTG 
GTTGGAGACC GAGGCTTGCC CGGACAGCCC GGGAGGCAGG GCGTGGCGGG CCGAGATGCT 
AGTGACCAGC ACATAGAGGA CGTGGTGCTG AAGATGCTGC AAGAGCAATT GGCAGAAATG 
GCTGTGAGTG CCAAGCGGGA GGCCCTGGGT GCGACTGGGA TGATGGGTCC CCCAGGACCC 
CCTGGGCCTC CTGGGTACCC AGGCAAACAG GGACCCCATG GGCACCCTGG CCCTCGGGGT 
GTTCCTGGCA TCGTGGGAGC CGTGGGTCAG ATTGGCAACA CTGGGCCCAA GGGAAAACGT 
GGAGAGAAGG GTGATCAGGG AGAAGTTGGC CGTGGGCACC CCGGGATGCC TGGGCCCCCG 
GGGATCCCAG GACTGCCTGG CCGGCCTGGT CAGGCAATCA ACGGCAAAGA TGGAGATCGA 
GGGGCTCCAG GGGCCCCAGG AGAGGCAGGT CGACCTGGCC TGCCAGGCCC CATTGGGCTG 
CCAGGCTTCT GTGAACCTGC GGCCTGCCTT GGAGCCTCAG CCTATGCCTC TGGACGCCTC 
ACGGAGCCTG GATCCATCAA GGGGCCATGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OBa90531
Clone ID Related Accession (Same CDS sequence) XM_015466616.1
Accession Version XM_015466616.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 2043bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-01-25
Organism Bos taurus(cattle)
Product collagen alpha-2(IX) chain isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003103874.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
ATGGCCCCCG CGGCCGACCC CCGTAGCCTC CTGGTTCTCC TGCAGGTGCT GGGGCTCGCC 
CTGGCGCAGA TCAGAGGTCT GCCAGGAGAG CCGGGGCCTC CGGGGCCCCC AGGGCCACCG 
GGAGTGCCTG GATCCGACGG AATCGACGGT GACAAAGGGC CCCCTGGGAA AGCTGGCCCT 
CCGGGACCTA AGGGAGAGCC TGGCAAAGCA GGAACAGATG GGCCAGACGG GAAGCCCGGG 
ATAGATGGTC TAACTGGAGC CAAGGGGGAG CCTGGTCCTG CAGGGATCCC TGGAGTCAAG 
GGCCAGCCTG GGCTCCCAGG TCCCCCCGGC CTGCCGGGCC CTGGCTTCGC CGGACCTCCT 
GGACCACCTG GACCTGTTGG CCTCCCTGGT GAGATTGGAC TCACAGGCCC CAAGGGGGAT 
CCTGGACCAG AGGGACCATC AGGGCCTCCG GGACCCCCTG GGAAACCGGG CCGCCCTGGA 
ACCATTCAGG GTCTGGAAGG CAGCGCGGAT TTCCTGTGTC CAACCAACTG TCCAGCGGGC 
GTGAAAGGGC CCCCAGGGCT GCAGGGCGTG AAGGGGCATC CAGGCAGACG CGGGCTTCTG 
GGAGATTCCG GCCGCCAGGG GAAGCCGGGT CCCAAGGGAG ATGTGGGTGC CTCTGGAGAG 
CAAGGCATCC CTGGACCACC GGGTCCCCAG GGTGTCAGGG GCTACCCAGG CATGGCAGGA 
CCCAAAGGAG AGACGGGCCC TCAGGGGTAC AAAGGCATGG TGGGCTCCGT CGGCGCAGCC 
GGGTCACCTG GTGAGGAAGG TCCACGGGGA CCACCGGGCC GAGCTGGAGA GAAGGGTGAT 
GTGGGGAGCC AAGGAGTTCG AGGACCCCAG GGAATAACAG GCCCAAAGGG AGCAACCGGA 
CCCCCAGGCA TCGACGGCAA GGATGGGACC CCAGGCACGC CTGGAGTGAA GGGCAGTGCA 
GGACAGGCAG GGCGGCCGGG AAACCCAGGC CACCAGGGCC TAGCGGGTGT GCCTGGTATG 
CCTGGGACAA AAGGAGGCCC TGGAGACAAG GGTGAGCCAG GCCGGCAGGG CTTCCCTGGA 
GTCTCTGGTC CCCCCGGGAA GGAGGGAGAG CCAGGGCCTC GAGGAGAAAT CGGTCCCCAG 
GGCATCATGG GGCAGAAGGG TGACCACGGT GAGAGGGGGC CAGTGGGGCA GCCAGGCCCT 
CAAGGTCGGC AGGGCCCCAA AGGGGAACAG GGTCCTCCCG GAATTCCAGG GCCCCAAGGC 
TTGCCAGGCA TCAAGGGAGA CAAGGTACTA ACTGGGACTG AAAATACAAG GGAAAGAGGC 
CTTCAGATGC TGAGGGAGGG GTCATTCCCG CTGGGAACCC AACCCGCCCC GCAGCAAGGA 
GTCCGCGGAG AACCTGGCTA CCCCGGCCCC AGCGGAGATG CGGGCGCCCC GGGGGTGCAG 
GGCTACCCGG GGCCTCCGGG CCCTCGAGGA CTGGTTGGAG ACCGAGGCTT GCCCGGACAG 
CCCGGGAGGC AGGGCGTGGC GGGCCGAGAT GCTAGTGACC AGCACATAGA GGACGTGGTG 
CTGAAGATGC TGCAAGAGCA ATTGGCAGAA ATGGCTGTGA GTGCCAAGCG GGAGGCCCTG 
GGTGCGACTG GGATGATGGG TCCCCCAGGA CCCCCTGGGC CTCCTGGGTA CCCAGGCAAA 
CAGGGACCCC ATGGGCACCC TGGCCCTCGG GGTGTTCCTG GCATCGTGGG AGCCGTGGGT 
CAGATTGGCA ACACTGGGCC CAAGGGAAAA CGTGGAGAGA AGGGTGATCA GGGAGAAGTT 
GGCCGTGGGC ACCCCGGGAT GCCTGGGCCC CCGGGGATCC CAGGACTGCC TGGCCGGCCT 
GGTCAGGCAA TCAACGGCAA AGATGGAGAT CGAGGGGCTC CAGGGGCCCC AGGAGAGGCA 
GGTCGACCTG GCCTGCCAGG CCCCATTGGG CTGCCAGGCT TCTGTGAACC TGCGGCCTGC 
CTTGGAGCCT CAGCCTATGC CTCTGGACGC CTCACGGAGC CTGGATCCAT CAAGGGGCCA 
TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_015322102.1
CDS181..2223
Translation

Target ORF information:

RefSeq Version XM_015466616.1
Organism Bos taurus(cattle)
Definition Bos taurus collagen type IX alpha 2 (COL9A2), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_015466616.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
ATGGCCCCCG CGGCCGACCC CCGTAGCCTC CTGGTTCTCC TGCAGGTGCT GGGGCTCGCC 
CTGGCGCAGA TCAGAGGTCT GCCAGGAGAG CCGGGGCCTC CGGGGCCCCC AGGGCCACCG 
GGAGTGCCTG GATCCGACGG AATCGACGGT GACAAAGGGC CCCCTGGGAA AGCTGGCCCT 
CCGGGACCTA AGGGAGAGCC TGGCAAAGCA GGAACAGATG GGCCAGACGG GAAGCCCGGG 
ATAGATGGTC TAACTGGAGC CAAGGGGGAG CCTGGTCCTG CAGGGATCCC TGGAGTCAAG 
GGCCAGCCTG GGCTCCCAGG TCCCCCCGGC CTGCCGGGCC CTGGCTTCGC CGGACCTCCT 
GGACCACCTG GACCTGTTGG CCTCCCTGGT GAGATTGGAC TCACAGGCCC CAAGGGGGAT 
CCTGGACCAG AGGGACCATC AGGGCCTCCG GGACCCCCTG GGAAACCGGG CCGCCCTGGA 
ACCATTCAGG GTCTGGAAGG CAGCGCGGAT TTCCTGTGTC CAACCAACTG TCCAGCGGGC 
GTGAAAGGGC CCCCAGGGCT GCAGGGCGTG AAGGGGCATC CAGGCAGACG CGGGCTTCTG 
GGAGATTCCG GCCGCCAGGG GAAGCCGGGT CCCAAGGGAG ATGTGGGTGC CTCTGGAGAG 
CAAGGCATCC CTGGACCACC GGGTCCCCAG GGTGTCAGGG GCTACCCAGG CATGGCAGGA 
CCCAAAGGAG AGACGGGCCC TCAGGGGTAC AAAGGCATGG TGGGCTCCGT CGGCGCAGCC 
GGGTCACCTG GTGAGGAAGG TCCACGGGGA CCACCGGGCC GAGCTGGAGA GAAGGGTGAT 
GTGGGGAGCC AAGGAGTTCG AGGACCCCAG GGAATAACAG GCCCAAAGGG AGCAACCGGA 
CCCCCAGGCA TCGACGGCAA GGATGGGACC CCAGGCACGC CTGGAGTGAA GGGCAGTGCA 
GGACAGGCAG GGCGGCCGGG AAACCCAGGC CACCAGGGCC TAGCGGGTGT GCCTGGTATG 
CCTGGGACAA AAGGAGGCCC TGGAGACAAG GGTGAGCCAG GCCGGCAGGG CTTCCCTGGA 
GTCTCTGGTC CCCCCGGGAA GGAGGGAGAG CCAGGGCCTC GAGGAGAAAT CGGTCCCCAG 
GGCATCATGG GGCAGAAGGG TGACCACGGT GAGAGGGGGC CAGTGGGGCA GCCAGGCCCT 
CAAGGTCGGC AGGGCCCCAA AGGGGAACAG GGTCCTCCCG GAATTCCAGG GCCCCAAGGC 
TTGCCAGGCA TCAAGGGAGA CAAGGTACTA ACTGGGACTG AAAATACAAG GGAAAGAGGC 
CTTCAGATGC TGAGGGAGGG GTCATTCCCG CTGGGAACCC AACCCGCCCC GCAGCAAGGA 
GTCCGCGGAG AACCTGGCTA CCCCGGCCCC AGCGGAGATG CGGGCGCCCC GGGGGTGCAG 
GGCTACCCGG GGCCTCCGGG CCCTCGAGGA CTGGTTGGAG ACCGAGGCTT GCCCGGACAG 
CCCGGGAGGC AGGGCGTGGC GGGCCGAGAT GCTAGTGACC AGCACATAGA GGACGTGGTG 
CTGAAGATGC TGCAAGAGCA ATTGGCAGAA ATGGCTGTGA GTGCCAAGCG GGAGGCCCTG 
GGTGCGACTG GGATGATGGG TCCCCCAGGA CCCCCTGGGC CTCCTGGGTA CCCAGGCAAA 
CAGGGACCCC ATGGGCACCC TGGCCCTCGG GGTGTTCCTG GCATCGTGGG AGCCGTGGGT 
CAGATTGGCA ACACTGGGCC CAAGGGAAAA CGTGGAGAGA AGGGTGATCA GGGAGAAGTT 
GGCCGTGGGC ACCCCGGGAT GCCTGGGCCC CCGGGGATCC CAGGACTGCC TGGCCGGCCT 
GGTCAGGCAA TCAACGGCAA AGATGGAGAT CGAGGGGCTC CAGGGGCCCC AGGAGAGGCA 
GGTCGACCTG GCCTGCCAGG CCCCATTGGG CTGCCAGGCT TCTGTGAACC TGCGGCCTGC 
CTTGGAGCCT CAGCCTATGC CTCTGGACGC CTCACGGAGC CTGGATCCAT CAAGGGGCCA 
TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed