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SFT2D2 cDNA ORF clone, Bos taurus(cattle)

Summary

Gene Symbol SFT2D2
Entrez Gene ID 506944
Full Name SFT2 domain containing 2
General protein information
Preferred Names

SFT2 domain containing 2

Names

vesicle transport protein SFT2B
Gene Type protein-coding
Organism Bos taurus(cattle)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_001192122.1 NP_001179051.1 vesicle transport protein SFT2B
XM_024986666.1 XP_024842434.1 vesicle transport protein SFT2B isoform X1
XM_024986670.1 XP_024842438.1 vesicle transport protein SFT2B isoform X2

Pathways from BioSystems


Homologies


Pan troglodytes (chimpanzee) SFT2D2 XP_003308646.1
Rattus norvegicus (Norway rat) Sft2d2 NP_001029183.1
Danio rerio (zebrafish) zgc:112392 NP_001018531.1
SFT2D2 XP_001092638.1
Bos taurus (cattle) SFT2D2 NP_001179051.1
Arabidopsis thaliana (thale cress) AT5G23550 NP_197746.1
Oryza sativa (rice) Os02g0564500 NP_001047161.1
Homo sapiens (human) SFT2D2 NP_955376.1
Canis lupus familiaris (dog) SFT2D2 XP_005623026.1
Mus musculus (house mouse) Sft2d2 NP_663487.1
Gallus gallus (chicken) SFT2D2 XP_416592.1
Xenopus tropicalis (tropical clawed frog) sft2d2 NP_001016405.1

Gene Ontology


Bibliography

Related articles in PubMed

A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following SFT2D2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SFT2D2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OBa39230 NM_001192122.1
Latest version!		 Bos taurus SFT2 domain containing 2 (SFT2D2), mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $104.30
$149.00
OBa232610 XM_024986666.1
Latest version!		 Bos taurus SFT2 domain containing 2 (SFT2D2), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00
OBa232611 XM_024986670.1
Latest version!		 Bos taurus SFT2 domain containing 2 (SFT2D2), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00

ORF Online Only Promotion

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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OBa39230
Clone ID Related Accession (Same CDS sequence) NM_001192122.1
Accession Version NM_001192122.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 483bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-05-28
Organism Bos taurus(cattle)
Product vesicle transport protein SFT2B
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from NKLS02000003.1. On Jul 17, 2010 this sequence version replaced XM_583469.4. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR5571256.1551.1, SRR5571258.459.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN03145412, SAMN03145413 [ECO:0000350] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
ATGGACAAGC TGAAGAAGGT GCTGAGCGGG CAGGACTCTG AGGATCGGGG CGGCCTGTCT 
GAGGTTGTTG AGGCAACTTC ATTAAGCTCG GGCACCAGAA TAAAAGGCTT CATTGCCTGT 
TTTGCTGCAG GAATTCTCTG CTCACTTCTG GGAACTCTTT TGCTCTGGGT GCCCAGGAAG 
GGACTATATC TGTTCGCAGT GTTTTATACC TTTGGTAACA TCGCATCTCT TGGGAGCACT 
GTCTTCCTCA TGGGACCAAT GACACAGCTG AAGCGAATGT TTGAGCCTAC GCGTTTGATT 
GCAACTGTCT TGGTGCTGTT GTGTTTTGCA CTTACCCTGT GTTCTGCCTT TTGGTGGCAC 
AACAAAGGGC TTGCTCTCAT CTTCTGCATT TTGCAGTCTC TGGCCCTGAC GTGGTACAGT 
CTTTCCTACA TACCATTTGC AAGGGACGCT GTAAAGAAGT GTTTTACTGT GTGTCTTGCA 
TAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001179051.1
CDS40..522
Translation

Target ORF information:

RefSeq Version NM_001192122.1
Organism Bos taurus(cattle)
Definition Bos taurus SFT2 domain containing 2 (SFT2D2), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001192122.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
ATGGACAAGC TGAAGAAGGT GCTGAGCGGG CAGGACTCTG AGGATCGGGG CGGCCTGTCT 
GAGGTTGTTG AGGCAACTTC ATTAAGCTCG GGCACCAGAA TAAAAGGCTT CATTGCCTGT 
TTTGCTGCAG GAATTCTCTG CTCACTTCTG GGAACTCTTT TGCTCTGGGT GCCCAGGAAG 
GGACTATATC TGTTCGCAGT GTTTTATACC TTTGGTAACA TCGCATCTCT TGGGAGCACT 
GTCTTCCTCA TGGGACCAAT GACACAGCTG AAGCGAATGT TTGAGCCTAC GCGTTTGATT 
GCAACTGTCT TGGTGCTGTT GTGTTTTGCA CTTACCCTGT GTTCTGCCTT TTGGTGGCAC 
AACAAAGGGC TTGCTCTCAT CTTCTGCATT TTGCAGTCTC TGGCCCTGAC GTGGTACAGT 
CTTTCCTACA TACCATTTGC AAGGGACGCT GTAAAGAAGT GTTTTACTGT GTGTCTTGCA 
TAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OBa232610
Clone ID Related Accession (Same CDS sequence) XM_024986666.1
Accession Version XM_024986666.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 480bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-05-06
Organism Bos taurus(cattle)
Product vesicle transport protein SFT2B isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037330.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
ATGGACAAGC TGAAGAAGGT GCTGAGCGGG CAGGACTCTG AGGATCGGGG CGGCCTGTCT 
GAGGTTGTTG AGGCAACTTC ATTAAGCTCG GGCACCAGAA TAAAAGGCTT CATTGCCTGT 
TTTGCTGCAG GAATTCTCTG CTCACTTCTG GGAACTCTTT TGCTCTGGGT GCCCAGGAAG 
GGACTATATC TGTTCGCAGT GTTTTATACC TTTGGTAACA TCGCATCTCT TGGGAGTGTA 
GGCTTAAGAG TGCACTCAGC TCAAACACTT GACCTGGCAG CCTTGAATTC AAGTGGAAAC 
TTAATGGCAC TTCAAAGAGA GGTAGATTTA TTTAGCTTTT TTTTTTTTTT TTTTTTTTTA 
ATAGAACACT TAGTAGCTCA TGTCATCTGC TGGTTGGCTG TGTTAAACAC TGACTATAAC 
CAGCTACTCC TGGAGCGATG CTTCTTGTGG CATTTCTGTC AGAGGAGTTG GGAAGCATGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_024842434.1
CDS151..630
Translation

Target ORF information:

RefSeq Version XM_024986666.1
Organism Bos taurus(cattle)
Definition Bos taurus SFT2 domain containing 2 (SFT2D2), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_024986666.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
ATGGACAAGC TGAAGAAGGT GCTGAGCGGG CAGGACTCTG AGGATCGGGG CGGCCTGTCT 
GAGGTTGTTG AGGCAACTTC ATTAAGCTCG GGCACCAGAA TAAAAGGCTT CATTGCCTGT 
TTTGCTGCAG GAATTCTCTG CTCACTTCTG GGAACTCTTT TGCTCTGGGT GCCCAGGAAG 
GGACTATATC TGTTCGCAGT GTTTTATACC TTTGGTAACA TCGCATCTCT TGGGAGTGTA 
GGCTTAAGAG TGCACTCAGC TCAAACACTT GACCTGGCAG CCTTGAATTC AAGTGGAAAC 
TTAATGGCAC TTCAAAGAGA GGTAGATTTA TTTAGCTTTT TTTTTTTTTT TTTTTTTTTA 
ATAGAACACT TAGTAGCTCA TGTCATCTGC TGGTTGGCTG TGTTAAACAC TGACTATAAC 
CAGCTACTCC TGGAGCGATG CTTCTTGTGG CATTTCTGTC AGAGGAGTTG GGAAGCATGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OBa232611
Clone ID Related Accession (Same CDS sequence) XM_024986670.1
Accession Version XM_024986670.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 414bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-05-06
Organism Bos taurus(cattle)
Product vesicle transport protein SFT2B isoform X2
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037330.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
ATGGACAAGC TGAAGAAGGT GCTGAGCGGG CAGGACTCTG AGGATCGGGG CGGCCTGTCT 
GAGGTTGTTG AGGCAACTTC ATTAAGCTCG GGCACCAGAA TAAAAGGCTT CATTGCCTGT 
TTTGCTGCAG GAATTCTCTG CTCACTTCTG GGAACTCTTT TGCTCTGGGT GCCCAGGAAG 
GGACTATATC TGTTCGCAGT GTTTTATACC TTTGGTAACA TCGCATCTCT TGGGAGCACT 
GTCTTCCTCA TGGGACCAAT GACACAGCTG AAGCGAATGT TTGAGCCTAC GCGTTTGATT 
GCAACTGTCT TGGTGCTGGT AAGTTGTGTT TTGCACTTAC CCTGTGTTCT GCCTTTTGGT 
GGCACAACAA AGGGCTTGCT CTCATCTTCT GCATTTTGCA GTCTCTGGCC CTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_024842438.1
CDS129..542
Translation

Target ORF information:

RefSeq Version XM_024986670.1
Organism Bos taurus(cattle)
Definition Bos taurus SFT2 domain containing 2 (SFT2D2), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_024986670.1

ORF Insert Sequence:

1
61
121
181
241
301
361
ATGGACAAGC TGAAGAAGGT GCTGAGCGGG CAGGACTCTG AGGATCGGGG CGGCCTGTCT 
GAGGTTGTTG AGGCAACTTC ATTAAGCTCG GGCACCAGAA TAAAAGGCTT CATTGCCTGT 
TTTGCTGCAG GAATTCTCTG CTCACTTCTG GGAACTCTTT TGCTCTGGGT GCCCAGGAAG 
GGACTATATC TGTTCGCAGT GTTTTATACC TTTGGTAACA TCGCATCTCT TGGGAGCACT 
GTCTTCCTCA TGGGACCAAT GACACAGCTG AAGCGAATGT TTGAGCCTAC GCGTTTGATT 
GCAACTGTCT TGGTGCTGGT AAGTTGTGTT TTGCACTTAC CCTGTGTTCT GCCTTTTGGT 
GGCACAACAA AGGGCTTGCT CTCATCTTCT GCATTTTGCA GTCTCTGGCC CTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

A whole-genome assembly of the domestic cow, Bos taurus.
Genome biology10(4)R42(2009)
Zimin AV,Delcher AL,Florea L,Kelley DR,Schatz MC,Puiu D,Hanrahan F,Pertea G,Van Tassell CP,Sonstegard TS,Mar?ais G,Roberts M,Subramanian P,Yorke JA,Salzberg SL