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SNRPA cDNA ORF clone, Bos taurus(cattle)

Summary

Gene Symbol SNRPA
Entrez Gene ID 509802
Full Name small nuclear ribonucleoprotein polypeptide A
Synonyms U1A
General protein information
Preferred Names

small nuclear ribonucleoprotein polypeptide A

Names

U1 small nuclear ribonucleoprotein A
U1 snRNP A
U1 snRNP protein A
U1-A
Gene Type protein-coding
Organism Bos taurus(cattle)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_024978092.1 XP_024833860.1 U1 small nuclear ribonucleoprotein A isoform X1
NM_001046039.2 NP_001039504.1 U1 small nuclear ribonucleoprotein A

Pathways from BioSystems


Homologies


Canis lupus familiaris (dog) SNRPA XP_533663.2
Anopheles gambiae (African malaria mosquito) AgaP_AGAP011637 XP_320869.2
Oryza sativa (rice) Os05g0154800 NP_001054685.1
Bos taurus (cattle) SNRPA NP_001039504.1
Homo sapiens (human) SNRPA NP_004587.1
Rattus norvegicus (Norway rat) Snrpa NP_001008304.1
Danio rerio (zebrafish) snrpa NP_955965.1
Caenorhabditis elegans (roundworm) rnp-2 NP_500504.1
Schizosaccharomyces pombe (fission yeast) usp102 NP_596424.1
Pan troglodytes (chimpanzee) SNRPA XP_512674.2
SNRPA XP_001098504.1
Drosophila melanogaster (fruit fly) snf NP_511045.1
Neurospora crassa NCU08034 XP_962704.1
Magnaporthe oryzae (rice blast fungus) MGG_07085 XP_003715274.1
Arabidopsis thaliana (thale cress) U1A NP_182280.1
Xenopus tropicalis (tropical clawed frog) snrpa NP_001016784.1

Gene Ontology


Bibliography

Related articles in PubMed

A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following SNRPA gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SNRPA cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OBa00332 NM_001046039.2
Latest version!		 Bos taurus small nuclear ribonucleoprotein polypeptide A (SNRPA), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $174.30
$249.00
OBa00332 XM_024978092.1
Latest version!		 Bos taurus small nuclear ribonucleoprotein polypeptide A (SNRPA), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $174.30
$249.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone 30% OFF
2-4 Clone 40% OFF
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30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OBa00332
Clone ID Related Accession (Same CDS sequence) XM_024978092.1 , NM_001046039.2
Accession Version NM_001046039.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 849bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-10-18
Organism Bos taurus(cattle)
Product U1 small nuclear ribonucleoprotein A
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC112544.1. On Aug 30, 2012 this sequence version replaced NM_001046039.1. ##Evidence-Data-START## Transcript exon combination :: BC112544.1, DV813914.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145412, SAMN03145413 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
ATGGCAGTTC CCGAGACCCG CCCCAACCAC ACTATTTATA TCAACAATCT CAATGAGAAG 
ATCAAGAAGG ATGAGCTGAA GAAGTCCCTG TATGCCATCT TCTCCCAGTT TGGCCAGATC 
CTGGATATCC TGGTGTCACG AAGCCTGAAG ATGAGGGGCC AGGCCTTTGT CATCTTCAAG 
GAGGTCAGCA GTGCCACCAA CGCGCTGCGT TCCATGCAGG GCTTCCCCTT CTACGACAAG 
CCCATGCGCA TCCAATATGC CAAGACCGAC TCGGATATCA TTGCCAAGAT GAAGGGCACC 
TTCGTGGAGC GGGACCGCAA GCGGGAGAAG AGGAAGCCCA AGAGCCAGGA GACTCCAGCT 
GCCAAAAAAG CCGTGCAGGG AGGGGCGGCT GCCCCTGTGG TGGGCACCGT GCAAGGGCCT 
GTCCCGGGCA TGCCGCCGAT GACTCAGGCG CCCCGCATCA TGCACCACAT GCCGGGCCAG 
CCCCCCTACA TGCCGCCGCC GGGCATGATC CCGCCTCCAG GCCTGGCGCC TGGCCAGCTC 
CCACCGGGGG CCATGCCGCC ACAACAGCTT ATGCCGGGGC AGATGCCACC TGCCCAGCCT 
CTTTCAGAAA ATCCACCAAA TCACATCTTG TTCCTTACCA ACCTGCCGGA AGAGACCAAT 
GAGCTCATGC TTTCCATGCT TTTCAACCAG TTCCCTGGGT TCAAGGAGGT CCGGCTGGTC 
CCTGGGCGGC ACGACATCGC CTTCGTGGAG TTTGACAATG AGGTGCAGGC AGGGGCTGCT 
CGAGACGCCC TGCAGGGCTT CAAGATCACC CAGAACAACG CCATGAAGAT CTCCTTTGCC 
AAGAAGTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001039504.1
CDS85..933
Translation

Target ORF information:

RefSeq Version NM_001046039.2
Organism Bos taurus(cattle)
Definition Bos taurus small nuclear ribonucleoprotein polypeptide A (SNRPA), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001046039.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
ATGGCAGTTC CCGAGACCCG CCCCAACCAC ACTATTTATA TCAACAATCT CAATGAGAAG 
ATCAAGAAGG ATGAGCTGAA GAAGTCCCTG TATGCCATCT TCTCCCAGTT TGGCCAGATC 
CTGGATATCC TGGTGTCACG AAGCCTGAAG ATGAGGGGCC AGGCCTTTGT CATCTTCAAG 
GAGGTCAGCA GTGCCACCAA CGCGCTGCGT TCCATGCAGG GCTTCCCCTT CTACGACAAG 
CCCATGCGCA TCCAATATGC CAAGACCGAC TCGGATATCA TTGCCAAGAT GAAGGGCACC 
TTCGTGGAGC GGGACCGCAA GCGGGAGAAG AGGAAGCCCA AGAGCCAGGA GACTCCAGCT 
GCCAAAAAAG CCGTGCAGGG AGGGGCGGCT GCCCCTGTGG TGGGCACCGT GCAAGGGCCT 
GTCCCGGGCA TGCCGCCGAT GACTCAGGCG CCCCGCATCA TGCACCACAT GCCGGGCCAG 
CCCCCCTACA TGCCGCCGCC GGGCATGATC CCGCCTCCAG GCCTGGCGCC TGGCCAGCTC 
CCACCGGGGG CCATGCCGCC ACAACAGCTT ATGCCGGGGC AGATGCCACC TGCCCAGCCT 
CTTTCAGAAA ATCCACCAAA TCACATCTTG TTCCTTACCA ACCTGCCGGA AGAGACCAAT 
GAGCTCATGC TTTCCATGCT TTTCAACCAG TTCCCTGGGT TCAAGGAGGT CCGGCTGGTC 
CCTGGGCGGC ACGACATCGC CTTCGTGGAG TTTGACAATG AGGTGCAGGC AGGGGCTGCT 
CGAGACGCCC TGCAGGGCTT CAAGATCACC CAGAACAACG CCATGAAGAT CTCCTTTGCC 
AAGAAGTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OBa00332
Clone ID Related Accession (Same CDS sequence) XM_024978092.1 , NM_001046039.2
Accession Version XM_024978092.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 849bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-05-06
Organism Bos taurus(cattle)
Product U1 small nuclear ribonucleoprotein A isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037345.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
ATGGCAGTTC CCGAGACCCG CCCCAACCAC ACTATTTATA TCAACAATCT CAATGAGAAG 
ATCAAGAAGG ATGAGCTGAA GAAGTCCCTG TATGCCATCT TCTCCCAGTT TGGCCAGATC 
CTGGATATCC TGGTGTCACG AAGCCTGAAG ATGAGGGGCC AGGCCTTTGT CATCTTCAAG 
GAGGTCAGCA GTGCCACCAA CGCGCTGCGT TCCATGCAGG GCTTCCCCTT CTACGACAAG 
CCCATGCGCA TCCAATATGC CAAGACCGAC TCGGATATCA TTGCCAAGAT GAAGGGCACC 
TTCGTGGAGC GGGACCGCAA GCGGGAGAAG AGGAAGCCCA AGAGCCAGGA GACTCCAGCT 
GCCAAAAAAG CCGTGCAGGG AGGGGCGGCT GCCCCTGTGG TGGGCACCGT GCAAGGGCCT 
GTCCCGGGCA TGCCGCCGAT GACTCAGGCG CCCCGCATCA TGCACCACAT GCCGGGCCAG 
CCCCCCTACA TGCCGCCGCC GGGCATGATC CCGCCTCCAG GCCTGGCGCC TGGCCAGCTC 
CCACCGGGGG CCATGCCGCC ACAACAGCTT ATGCCGGGGC AGATGCCACC TGCCCAGCCT 
CTTTCAGAAA ATCCACCAAA TCACATCTTG TTCCTTACCA ACCTGCCGGA AGAGACCAAT 
GAGCTCATGC TTTCCATGCT TTTCAACCAG TTCCCTGGGT TCAAGGAGGT CCGGCTGGTC 
CCTGGGCGGC ACGACATCGC CTTCGTGGAG TTTGACAATG AGGTGCAGGC AGGGGCTGCT 
CGAGACGCCC TGCAGGGCTT CAAGATCACC CAGAACAACG CCATGAAGAT CTCCTTTGCC 
AAGAAGTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_024833860.1
CDS154..1002
Translation

Target ORF information:

RefSeq Version XM_024978092.1
Organism Bos taurus(cattle)
Definition Bos taurus small nuclear ribonucleoprotein polypeptide A (SNRPA), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_024978092.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
ATGGCAGTTC CCGAGACCCG CCCCAACCAC ACTATTTATA TCAACAATCT CAATGAGAAG 
ATCAAGAAGG ATGAGCTGAA GAAGTCCCTG TATGCCATCT TCTCCCAGTT TGGCCAGATC 
CTGGATATCC TGGTGTCACG AAGCCTGAAG ATGAGGGGCC AGGCCTTTGT CATCTTCAAG 
GAGGTCAGCA GTGCCACCAA CGCGCTGCGT TCCATGCAGG GCTTCCCCTT CTACGACAAG 
CCCATGCGCA TCCAATATGC CAAGACCGAC TCGGATATCA TTGCCAAGAT GAAGGGCACC 
TTCGTGGAGC GGGACCGCAA GCGGGAGAAG AGGAAGCCCA AGAGCCAGGA GACTCCAGCT 
GCCAAAAAAG CCGTGCAGGG AGGGGCGGCT GCCCCTGTGG TGGGCACCGT GCAAGGGCCT 
GTCCCGGGCA TGCCGCCGAT GACTCAGGCG CCCCGCATCA TGCACCACAT GCCGGGCCAG 
CCCCCCTACA TGCCGCCGCC GGGCATGATC CCGCCTCCAG GCCTGGCGCC TGGCCAGCTC 
CCACCGGGGG CCATGCCGCC ACAACAGCTT ATGCCGGGGC AGATGCCACC TGCCCAGCCT 
CTTTCAGAAA ATCCACCAAA TCACATCTTG TTCCTTACCA ACCTGCCGGA AGAGACCAAT 
GAGCTCATGC TTTCCATGCT TTTCAACCAG TTCCCTGGGT TCAAGGAGGT CCGGCTGGTC 
CCTGGGCGGC ACGACATCGC CTTCGTGGAG TTTGACAATG AGGTGCAGGC AGGGGCTGCT 
CGAGACGCCC TGCAGGGCTT CAAGATCACC CAGAACAACG CCATGAAGAT CTCCTTTGCC 
AAGAAGTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

A whole-genome assembly of the domestic cow, Bos taurus.
Genome biology10(4)R42(2009)
Zimin AV,Delcher AL,Florea L,Kelley DR,Schatz MC,Puiu D,Hanrahan F,Pertea G,Van Tassell CP,Sonstegard TS,Mar?ais G,Roberts M,Subramanian P,Yorke JA,Salzberg SL