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LMX1A cDNA ORF clone, Bos taurus(cattle)

Summary

Gene Symbol LMX1A
Entrez Gene ID 510296
Full Name LIM homeobox transcription factor 1 alpha
General protein information
Preferred Names

LIM homeobox transcription factor 1 alpha

Names

LIM homeobox transcription factor 1-alpha
Gene Type protein-coding
Organism Bos taurus(cattle)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_001191325.1 NP_001178254.1 LIM homeobox transcription factor 1-alpha
XM_024987267.1 XP_024843035.1 LIM homeobox transcription factor 1-alpha isoform X1

Pathways from BioSystems


Homologies


Bos taurus (cattle) LMX1A NP_001178254.1
Pan troglodytes (chimpanzee) LMX1A XP_001174539.1
Canis lupus familiaris (dog) LMX1A XP_851352.2
Gallus gallus (chicken) LMX1A NP_001244317.1
LMX1A XP_001084612.1
Xenopus tropicalis (tropical clawed frog) LOC100492433 XP_002934210.1
Mus musculus (house mouse) Lmx1a NP_387501.1
Rattus norvegicus (Norway rat) Lmx1a NP_001099437.2
Homo sapiens (human) LMX1A NP_796372.1

Gene Ontology


Bibliography

Related articles in PubMed

A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LMX1A gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LMX1A cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OBa02039 NM_001191325.1
Latest version!		 Bos taurus LIM homeobox transcription factor 1 alpha (LMX1A), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $258.30
$369.00
OBa02039 XM_024987267.1
Latest version!		 Bos taurus LIM homeobox transcription factor 1 alpha (LMX1A), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $258.30
$369.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OBa02039
Clone ID Related Accession (Same CDS sequence) NM_001191325.1 , XM_024987267.1
Accession Version NM_001191325.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1149bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-05-29
Organism Bos taurus(cattle)
Product LIM homeobox transcription factor 1-alpha
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from NKLS02000003.1. On Jul 17, 2010 this sequence version replaced XM_001789182.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN03145415, SAMN03145432 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
ATGCTGGACG GCCTGAAGAT GGAGGAGAAC TTCCAAAGCG CCATCGAAAC GTCGGCCTCC 
TTCTCCTCGC TGCTGGGCAG AGCGGTGAGC CCGAAGTCTG TCTGTGAGGG CTGTCAACGG 
GTCATCTCGG ATAGGTTTCT GCTGCGGCTC AACGACAGCT TCTGGCATGA GCAGTGCGTG 
CAGTGTGCCT CCTGCAAAGA GCCCCTGGAG ACCACCTGCT TCTACCGGGA CAAGAAGCTC 
TACTGCAAGT ATGACTATGA GAAGCTGTTT GCTGTCAAAT GCGGGGGCTG CTTTGAGGCC 
ATCGCACCCA ACGAGTTTGT TATGCGGGCC CAGAAGAGCG TGTACCACCT GAGCTGCTTC 
TGCTGCTGTG TCTGCGAGCG GCAGCTCCAG AAGGGTGATG AGTTTGTCCT GAAGGAGGGG 
CAGCTGCTCT GCAAAGGGGA CTATGAGAAG GAGCGGGAGC TGCTCAGCCT GGTGAGCCCA 
GCAGCGTCAG ACTCAGGGAA AAGTGATGAT GAGGAAAGTC TTTGCAAGTC AGCCCACGGG 
GCAGGGAAAG GAGCCTCTGA GGACAGCAAG GACCATAAGC GCCCCAAACG TCCCAGAACC 
ATCTTGACAA CCCAGCAGAG GAGAGCATTC AAGGCCTCGT TTGAAGTATC CTCCAAGCCG 
TGCAGGAAGG TGAGGGAGAC CCTGGCTGCA GAGACAGGGC TGAGCGTCCG TGTGGTTCAG 
GTGTGGTTCC AGAACCAGAG AGCTAAGATG AAGAAGCTGG CCCGGCGGCA GCAGCAGCAG 
CAGCAAGATC AGCAGAACAC CCAGAGGCTG AGTTCCGCTC AGACAAACGG TGGTGGGAGC 
GCTGGCATGG AAGGGATCAT GAACCCCTAC ACGGCTCTGC CCACCTCACA GCAGCTCCTG 
GCCATCGAAC AGAGTGTCTA CAGCTCAGAT CCCTTCCGAC AGGGGCTCAC CCCACCCCAG 
ATGCCTGGAG ACCACATGCA CCCCTATGGT GCTGAGCCCC TCTTCCACGA GCTGGACAGT 
GAGGACACCT CCCTCAGTAA CCTGGGTGAC TGTTTCCTAG CAACCTCAGA AGCCGGGCCC 
CTGCAGGCCA GAGTGGGAAA CCCCATTGAT CATCTGTACT CCATGCAGAA TTCTTACTTC 
ACCTCTTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001178254.1
CDS1..1149
Translation

Target ORF information:

RefSeq Version NM_001191325.1
Organism Bos taurus(cattle)
Definition Bos taurus LIM homeobox transcription factor 1 alpha (LMX1A), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001191325.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
ATGCTGGACG GCCTGAAGAT GGAGGAGAAC TTCCAAAGCG CCATCGAAAC GTCGGCCTCC 
TTCTCCTCGC TGCTGGGCAG AGCGGTGAGC CCGAAGTCTG TCTGTGAGGG CTGTCAACGG 
GTCATCTCGG ATAGGTTTCT GCTGCGGCTC AACGACAGCT TCTGGCATGA GCAGTGCGTG 
CAGTGTGCCT CCTGCAAAGA GCCCCTGGAG ACCACCTGCT TCTACCGGGA CAAGAAGCTC 
TACTGCAAGT ATGACTATGA GAAGCTGTTT GCTGTCAAAT GCGGGGGCTG CTTTGAGGCC 
ATCGCACCCA ACGAGTTTGT TATGCGGGCC CAGAAGAGCG TGTACCACCT GAGCTGCTTC 
TGCTGCTGTG TCTGCGAGCG GCAGCTCCAG AAGGGTGATG AGTTTGTCCT GAAGGAGGGG 
CAGCTGCTCT GCAAAGGGGA CTATGAGAAG GAGCGGGAGC TGCTCAGCCT GGTGAGCCCA 
GCAGCGTCAG ACTCAGGGAA AAGTGATGAT GAGGAAAGTC TTTGCAAGTC AGCCCACGGG 
GCAGGGAAAG GAGCCTCTGA GGACAGCAAG GACCATAAGC GCCCCAAACG TCCCAGAACC 
ATCTTGACAA CCCAGCAGAG GAGAGCATTC AAGGCCTCGT TTGAAGTATC CTCCAAGCCG 
TGCAGGAAGG TGAGGGAGAC CCTGGCTGCA GAGACAGGGC TGAGCGTCCG TGTGGTTCAG 
GTGTGGTTCC AGAACCAGAG AGCTAAGATG AAGAAGCTGG CCCGGCGGCA GCAGCAGCAG 
CAGCAAGATC AGCAGAACAC CCAGAGGCTG AGTTCCGCTC AGACAAACGG TGGTGGGAGC 
GCTGGCATGG AAGGGATCAT GAACCCCTAC ACGGCTCTGC CCACCTCACA GCAGCTCCTG 
GCCATCGAAC AGAGTGTCTA CAGCTCAGAT CCCTTCCGAC AGGGGCTCAC CCCACCCCAG 
ATGCCTGGAG ACCACATGCA CCCCTATGGT GCTGAGCCCC TCTTCCACGA GCTGGACAGT 
GAGGACACCT CCCTCAGTAA CCTGGGTGAC TGTTTCCTAG CAACCTCAGA AGCCGGGCCC 
CTGCAGGCCA GAGTGGGAAA CCCCATTGAT CATCTGTACT CCATGCAGAA TTCTTACTTC 
ACCTCTTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OBa02039
Clone ID Related Accession (Same CDS sequence) NM_001191325.1 , XM_024987267.1
Accession Version XM_024987267.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1149bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-05-06
Organism Bos taurus(cattle)
Product LIM homeobox transcription factor 1-alpha isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037330.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
ATGCTGGACG GCCTGAAGAT GGAGGAGAAC TTCCAAAGCG CCATCGAAAC GTCGGCCTCC 
TTCTCCTCGC TGCTGGGCAG AGCGGTGAGC CCGAAGTCTG TCTGTGAGGG CTGTCAACGG 
GTCATCTCGG ATAGGTTTCT GCTGCGGCTC AACGACAGCT TCTGGCATGA GCAGTGCGTG 
CAGTGTGCCT CCTGCAAAGA GCCCCTGGAG ACCACCTGCT TCTACCGGGA CAAGAAGCTC 
TACTGCAAGT ATGACTATGA GAAGCTGTTT GCTGTCAAAT GCGGGGGCTG CTTTGAGGCC 
ATCGCACCCA ACGAGTTTGT TATGCGGGCC CAGAAGAGCG TGTACCACCT GAGCTGCTTC 
TGCTGCTGTG TCTGCGAGCG GCAGCTCCAG AAGGGTGATG AGTTTGTCCT GAAGGAGGGG 
CAGCTGCTCT GCAAAGGGGA CTATGAGAAG GAGCGGGAGC TGCTCAGCCT GGTGAGCCCA 
GCAGCGTCAG ACTCAGGGAA AAGTGATGAT GAGGAAAGTC TTTGCAAGTC AGCCCACGGG 
GCAGGGAAAG GAGCCTCTGA GGACAGCAAG GACCATAAGC GCCCCAAACG TCCCAGAACC 
ATCTTGACAA CCCAGCAGAG GAGAGCATTC AAGGCCTCGT TTGAAGTATC CTCCAAGCCG 
TGCAGGAAGG TGAGGGAGAC CCTGGCTGCA GAGACAGGGC TGAGCGTCCG TGTGGTTCAG 
GTGTGGTTCC AGAACCAGAG AGCTAAGATG AAGAAGCTGG CCCGGCGGCA GCAGCAGCAG 
CAGCAAGATC AGCAGAACAC CCAGAGGCTG AGTTCCGCTC AGACAAACGG TGGTGGGAGC 
GCTGGCATGG AAGGGATCAT GAACCCCTAC ACGGCTCTGC CCACCTCACA GCAGCTCCTG 
GCCATCGAAC AGAGTGTCTA CAGCTCAGAT CCCTTCCGAC AGGGGCTCAC CCCACCCCAG 
ATGCCTGGAG ACCACATGCA CCCCTATGGT GCTGAGCCCC TCTTCCACGA GCTGGACAGT 
GAGGACACCT CCCTCAGTAA CCTGGGTGAC TGTTTCCTAG CAACCTCAGA AGCCGGGCCC 
CTGCAGGCCA GAGTGGGAAA CCCCATTGAT CATCTGTACT CCATGCAGAA TTCTTACTTC 
ACCTCTTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_024843035.1
CDS388..1536
Translation

Target ORF information:

RefSeq Version XM_024987267.1
Organism Bos taurus(cattle)
Definition Bos taurus LIM homeobox transcription factor 1 alpha (LMX1A), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_024987267.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
ATGCTGGACG GCCTGAAGAT GGAGGAGAAC TTCCAAAGCG CCATCGAAAC GTCGGCCTCC 
TTCTCCTCGC TGCTGGGCAG AGCGGTGAGC CCGAAGTCTG TCTGTGAGGG CTGTCAACGG 
GTCATCTCGG ATAGGTTTCT GCTGCGGCTC AACGACAGCT TCTGGCATGA GCAGTGCGTG 
CAGTGTGCCT CCTGCAAAGA GCCCCTGGAG ACCACCTGCT TCTACCGGGA CAAGAAGCTC 
TACTGCAAGT ATGACTATGA GAAGCTGTTT GCTGTCAAAT GCGGGGGCTG CTTTGAGGCC 
ATCGCACCCA ACGAGTTTGT TATGCGGGCC CAGAAGAGCG TGTACCACCT GAGCTGCTTC 
TGCTGCTGTG TCTGCGAGCG GCAGCTCCAG AAGGGTGATG AGTTTGTCCT GAAGGAGGGG 
CAGCTGCTCT GCAAAGGGGA CTATGAGAAG GAGCGGGAGC TGCTCAGCCT GGTGAGCCCA 
GCAGCGTCAG ACTCAGGGAA AAGTGATGAT GAGGAAAGTC TTTGCAAGTC AGCCCACGGG 
GCAGGGAAAG GAGCCTCTGA GGACAGCAAG GACCATAAGC GCCCCAAACG TCCCAGAACC 
ATCTTGACAA CCCAGCAGAG GAGAGCATTC AAGGCCTCGT TTGAAGTATC CTCCAAGCCG 
TGCAGGAAGG TGAGGGAGAC CCTGGCTGCA GAGACAGGGC TGAGCGTCCG TGTGGTTCAG 
GTGTGGTTCC AGAACCAGAG AGCTAAGATG AAGAAGCTGG CCCGGCGGCA GCAGCAGCAG 
CAGCAAGATC AGCAGAACAC CCAGAGGCTG AGTTCCGCTC AGACAAACGG TGGTGGGAGC 
GCTGGCATGG AAGGGATCAT GAACCCCTAC ACGGCTCTGC CCACCTCACA GCAGCTCCTG 
GCCATCGAAC AGAGTGTCTA CAGCTCAGAT CCCTTCCGAC AGGGGCTCAC CCCACCCCAG 
ATGCCTGGAG ACCACATGCA CCCCTATGGT GCTGAGCCCC TCTTCCACGA GCTGGACAGT 
GAGGACACCT CCCTCAGTAA CCTGGGTGAC TGTTTCCTAG CAACCTCAGA AGCCGGGCCC 
CTGCAGGCCA GAGTGGGAAA CCCCATTGAT CATCTGTACT CCATGCAGAA TTCTTACTTC 
ACCTCTTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

A whole-genome assembly of the domestic cow, Bos taurus.
Genome biology10(4)R42(2009)
Zimin AV,Delcher AL,Florea L,Kelley DR,Schatz MC,Puiu D,Hanrahan F,Pertea G,Van Tassell CP,Sonstegard TS,Mar?ais G,Roberts M,Subramanian P,Yorke JA,Salzberg SL