Gene Symbol |
TSR1 |
Entrez Gene ID |
510820 |
Full Name |
TSR1, ribosome maturation factor |
General protein information |
- Preferred Names
TSR1, ribosome maturation factor
Names
pre-rRNA-processing protein TSR1 homolog
|
Gene Type |
protein-coding |
Organism |
Bos taurus(cattle) |
mRNA and Protein(s)
mRNA |
Protein |
Name |
XM_005220084.3 |
XP_005220141.1 |
pre-rRNA-processing protein TSR1 homolog isoform X1 |
XM_024979914.1 |
XP_024835682.1 |
pre-rRNA-processing protein TSR1 homolog isoform X2 |
NM_001101933.1 |
NP_001095403.1 |
pre-rRNA-processing protein TSR1 homolog |
XM_010815822.2 |
XP_010814124.1 |
pre-rRNA-processing protein TSR1 homolog isoform X2 |
XM_005220084.4 |
XP_005220141.2 |
pre-rRNA-processing protein TSR1 homolog isoform X1 |
Homo sapiens (human) |
TSR1 |
NP_060598.3 |
Rattus norvegicus (Norway rat) |
Tsr1 |
XP_002727820.1 |
Saccharomyces cerevisiae (baker's yeast) |
TSR1 |
NP_010223.1 |
Schizosaccharomyces pombe (fission yeast) |
SPAC23H4.15 |
NP_593391.1 |
Canis lupus familiaris (dog) |
LOC610048 |
XP_852531.1 |
Mus musculus (house mouse) |
Tsr1 |
NP_796299.2 |
Caenorhabditis elegans (roundworm) |
tag-151 |
NP_494840.1 |
Magnaporthe oryzae (rice blast fungus) |
MGG_01087 |
XP_003717850.1 |
Arabidopsis thaliana (thale cress) |
AT1G42440 |
NP_564480.1 |
Pan troglodytes (chimpanzee) |
TSR1 |
XP_003315339.1 |
|
TSR1 |
XP_001086730.1 |
Anopheles gambiae (African malaria mosquito) |
AgaP_AGAP009438 |
XP_307850.4 |
Kluyveromyces lactis |
KLLA0E05149g |
XP_454177.1 |
Neurospora crassa |
NCU01503 |
XP_956952.1 |
Canis lupus familiaris (dog) |
TSR1 |
XP_548321.4 |
Gallus gallus (chicken) |
LOC100857289 |
XP_004946616.1 |
Drosophila melanogaster (fruit fly) |
CG7338 |
NP_649304.1 |
Bos taurus (cattle) |
TSR1 |
NP_001095403.1 |
Danio rerio (zebrafish) |
tsr1 |
NP_001032447.2 |
Eremothecium gossypii |
AGOS_AER051C |
NP_984911.1 |
Oryza sativa (rice) |
Os11g0298400 |
NP_001067728.1 |
Related articles in PubMed
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following TSR1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TSR1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
OBa29521 |
Clone ID Related Accession (Same CDS sequence) |
NM_001101933.1
, XM_010815822.2
|
Accession Version |
NM_001101933.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1971bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-01-29 |
Organism |
Bos taurus(cattle) |
Product |
pre-rRNA-processing protein TSR1 homolog |
Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC149918.1. On Aug 21, 2007 this sequence version replaced XM_588025.3.
##Evidence-Data-START##
Transcript exon combination :: BC149918.1 [ECO:0000332]
RNAseq introns :: mixed/partial sample support SAMN03145412, SAMN03145413 [ECO:0000350]
##Evidence-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921
| ATGGCTAAAG TGGCTGATAC CATCCTGTTC CTCCTTGATC CACTAGAAGG CTGGGATAGC ACCGGGGATT ACTGCCTTTC TTGCCTGTTT GCTCAGGGCC TTCCCACCTA TACATTAGCT GTCCAAGGGA TTTCTAGCCT CCCGCCGAAG AAACAAATAG ATGCCAGAAA AAAGCTAAGT AAAGCAGTGG AGAAGCGCTT TCCTGAGGAC AAACTCCTCC TGTTAGATAC TCAGCAGGAG GCAGGGATGC TGCTCAGGCA GTTGGCTAAC CAAAAACAGC GGCATCTTGC CTTTCGAGAT CGGCGTGCCT ATCTGTTTGC TCATGCTGCT GAGTTTGTGC CTAGTGAAGA GAGTGACTTG GTGGGCACCT TGAAGATCTC AGGCTATGTT CGTGGTCAGG CTCTGAATGT AAATAGCGTG CTGCATATCA TTGGACATGG TGATTTCCAG ATGAAGCAGG TAGATGCCCC TGTGGACCCT TTCCCTTTAA ATCCGAGAGT GATCAAATCC TCAAAGGACT CAGGCACGGC AATGGAGATT TGTGCTGCAG ATGCTGTAGC TCGTATGGAG GAAGACCTGA AGGTTCTAAT GAAGGCAGAC CCTGATAGAC AAGAATCTTT GCAAACAGAG GTTATCCCAG ATCCAATGGA GGGGGAACAG ACCTGGCCCA CAGAGGAGGA GCTGAGCGAG GCACATGACT TACTGAAGGA AAGTTCCAAG GTAGTGAAGA AGGTTCCCAA AGGAACATCC AGTTATCAAG CTGAATGGAT TCTGGATGAG GATGGTGAAA GTGGTGGGGA AGGAGATGAG TACGATGATA TAGAACACGA GGATTTTATG GAAGAGGAAT CTCAGGATGA GGGTAGTGAA GAGGAAGAAG AGGAGGAATG TGAAACTATG ACTATAGGAG AGTCTGTACG TGATGATCTG TATGATGAGA AAGTGGATGA AGAGGCTGAG GAAAAAATGC TGGAGAAATA TAAACAACAA AGACTGGAAG AGATGTTCCC AGATGAAGTA GATACCCCCC GTGATGTGGC TGCTAGAATT CGATTTCAGA AATACAGAGG CCTTAAGAGC TTCCGGACAT CTCCGTGGGA TCCTAAGGAA AACCTCCCTC GAGATTATGC TCGGATCTTT CAGTTTCAGA ACTTTATTAA TACCCGGAGA CGCATCTTTA AAGAGATTGA AGAAAAAGAA GTTGAAGGAG CTGAGGTTGG CTGGTATGTC ACACTTCATG TCTCTGAAGT CCCAGTCTCA GTGGTTGAGC ACTTCAAGCG AGGCACACCC TTGATTGCAT TTTCGTTACT ACCTCATGAA CAGAAAATGT CAGTACTTAA TATGGTGGTG AGCCGGCACC CTGGCAACAC TGAACCCGTG AAAGCTAAAG AGGAGCTGAT CTTCCACTGT GGATTCAGGC GCTTCCGAGC CTCACCTTTA TTCTCTCAGC ACACTGCAGC GGATAAACAT AAATTTCAGA GGTTCCTGAC TGCAGACACA GCCCTGGTGG TGACAGTATA TGCCCCGATC ACTTTTCCTC CTGCATCTGT GCTGCTTTTC AAACAGAACA GCAATGGAAT GCACAGCCTC ATTGCCACAG GCCATCTCTT GTCAGTGGAT CCAGACAGGA TGGTCATCAA GAGAGTTGTT CTGAGTGGTC ATCCTTTCAA AATTTTTACT AAGACGGCAG TGGTGCGTTA CATGTTTTTC AACAGAGAGG ATGTACTGTG GTTTAAACCT GTGGAACTGA GAACAAAATG GGGCCGCAGG GGCCACATCA AGGAGCCTTT GGGTACTCAT GGTCACATGA AGTGCAGTTT TGATGGGAAG CTAAAATCTC AGGACACAGT ACTGATGAAT CTTTATAAGA GAGTTTTCCC CAAGTGGACT TACGATCCAT ATGTACCAGA ACCAGTCCCC TGGGTTAAAA GTGCGATTTC TTCAACACTG CCTGAAGTGG ACATGGAGTA G |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001095403.1 |
CDS | 282..2252 |
Translation | |
Target ORF information:
RefSeq Version | NM_001101933.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus TSR1 ribosome maturation factor (TSR1), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001101933.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921
| ATGGCTAAAG TGGCTGATAC CATCCTGTTC CTCCTTGATC CACTAGAAGG CTGGGATAGC ACCGGGGATT ACTGCCTTTC TTGCCTGTTT GCTCAGGGCC TTCCCACCTA TACATTAGCT GTCCAAGGGA TTTCTAGCCT CCCGCCGAAG AAACAAATAG ATGCCAGAAA AAAGCTAAGT AAAGCAGTGG AGAAGCGCTT TCCTGAGGAC AAACTCCTCC TGTTAGATAC TCAGCAGGAG GCAGGGATGC TGCTCAGGCA GTTGGCTAAC CAAAAACAGC GGCATCTTGC CTTTCGAGAT CGGCGTGCCT ATCTGTTTGC TCATGCTGCT GAGTTTGTGC CTAGTGAAGA GAGTGACTTG GTGGGCACCT TGAAGATCTC AGGCTATGTT CGTGGTCAGG CTCTGAATGT AAATAGCGTG CTGCATATCA TTGGACATGG TGATTTCCAG ATGAAGCAGG TAGATGCCCC TGTGGACCCT TTCCCTTTAA ATCCGAGAGT GATCAAATCC TCAAAGGACT CAGGCACGGC AATGGAGATT TGTGCTGCAG ATGCTGTAGC TCGTATGGAG GAAGACCTGA AGGTTCTAAT GAAGGCAGAC CCTGATAGAC AAGAATCTTT GCAAACAGAG GTTATCCCAG ATCCAATGGA GGGGGAACAG ACCTGGCCCA CAGAGGAGGA GCTGAGCGAG GCACATGACT TACTGAAGGA AAGTTCCAAG GTAGTGAAGA AGGTTCCCAA AGGAACATCC AGTTATCAAG CTGAATGGAT TCTGGATGAG GATGGTGAAA GTGGTGGGGA AGGAGATGAG TACGATGATA TAGAACACGA GGATTTTATG GAAGAGGAAT CTCAGGATGA GGGTAGTGAA GAGGAAGAAG AGGAGGAATG TGAAACTATG ACTATAGGAG AGTCTGTACG TGATGATCTG TATGATGAGA AAGTGGATGA AGAGGCTGAG GAAAAAATGC TGGAGAAATA TAAACAACAA AGACTGGAAG AGATGTTCCC AGATGAAGTA GATACCCCCC GTGATGTGGC TGCTAGAATT CGATTTCAGA AATACAGAGG CCTTAAGAGC TTCCGGACAT CTCCGTGGGA TCCTAAGGAA AACCTCCCTC GAGATTATGC TCGGATCTTT CAGTTTCAGA ACTTTATTAA TACCCGGAGA CGCATCTTTA AAGAGATTGA AGAAAAAGAA GTTGAAGGAG CTGAGGTTGG CTGGTATGTC ACACTTCATG TCTCTGAAGT CCCAGTCTCA GTGGTTGAGC ACTTCAAGCG AGGCACACCC TTGATTGCAT TTTCGTTACT ACCTCATGAA CAGAAAATGT CAGTACTTAA TATGGTGGTG AGCCGGCACC CTGGCAACAC TGAACCCGTG AAAGCTAAAG AGGAGCTGAT CTTCCACTGT GGATTCAGGC GCTTCCGAGC CTCACCTTTA TTCTCTCAGC ACACTGCAGC GGATAAACAT AAATTTCAGA GGTTCCTGAC TGCAGACACA GCCCTGGTGG TGACAGTATA TGCCCCGATC ACTTTTCCTC CTGCATCTGT GCTGCTTTTC AAACAGAACA GCAATGGAAT GCACAGCCTC ATTGCCACAG GCCATCTCTT GTCAGTGGAT CCAGACAGGA TGGTCATCAA GAGAGTTGTT CTGAGTGGTC ATCCTTTCAA AATTTTTACT AAGACGGCAG TGGTGCGTTA CATGTTTTTC AACAGAGAGG ATGTACTGTG GTTTAAACCT GTGGAACTGA GAACAAAATG GGGCCGCAGG GGCCACATCA AGGAGCCTTT GGGTACTCAT GGTCACATGA AGTGCAGTTT TGATGGGAAG CTAAAATCTC AGGACACAGT ACTGATGAAT CTTTATAAGA GAGTTTTCCC CAAGTGGACT TACGATCCAT ATGTACCAGA ACCAGTCCCC TGGGTTAAAA GTGCGATTTC TTCAACACTG CCTGAAGTGG ACATGGAGTA G |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa29521 |
Clone ID Related Accession (Same CDS sequence) |
NM_001101933.1
, XM_010815822.2
|
Accession Version |
XM_010815822.2 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1971bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-01-25 |
Organism |
Bos taurus(cattle) |
Product |
pre-rRNA-processing protein TSR1 homolog isoform X2 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104492.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jan 26, 2016 this sequence version replaced XM_010815822.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Bos taurus Annotation Release 105
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 6.5
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921
| ATGGCTAAAG TGGCTGATAC CATCCTGTTC CTCCTTGATC CACTAGAAGG CTGGGATAGC ACCGGGGATT ACTGCCTTTC TTGCCTGTTT GCTCAGGGCC TTCCCACCTA TACATTAGCT GTCCAAGGGA TTTCTAGCCT CCCGCCGAAG AAACAAATAG ATGCCAGAAA AAAGCTAAGT AAAGCAGTGG AGAAGCGCTT TCCTGAGGAC AAACTCCTCC TGTTAGATAC TCAGCAGGAG GCAGGGATGC TGCTCAGGCA GTTGGCTAAC CAAAAACAGC GGCATCTTGC CTTTCGAGAT CGGCGTGCCT ATCTGTTTGC TCATGCTGCT GAGTTTGTGC CTAGTGAAGA GAGTGACTTG GTGGGCACCT TGAAGATCTC AGGCTATGTT CGTGGTCAGG CTCTGAATGT AAATAGCGTG CTGCATATCA TTGGACATGG TGATTTCCAG ATGAAGCAGG TAGATGCCCC TGTGGACCCT TTCCCTTTAA ATCCGAGAGT GATCAAATCC TCAAAGGACT CAGGCACGGC AATGGAGATT TGTGCTGCAG ATGCTGTAGC TCGTATGGAG GAAGACCTGA AGGTTCTAAT GAAGGCAGAC CCTGATAGAC AAGAATCTTT GCAAACAGAG GTTATCCCAG ATCCAATGGA GGGGGAACAG ACCTGGCCCA CAGAGGAGGA GCTGAGCGAG GCACATGACT TACTGAAGGA AAGTTCCAAG GTAGTGAAGA AGGTTCCCAA AGGAACATCC AGTTATCAAG CTGAATGGAT TCTGGATGAG GATGGTGAAA GTGGTGGGGA AGGAGATGAG TACGATGATA TAGAACACGA GGATTTTATG GAAGAGGAAT CTCAGGATGA GGGTAGTGAA GAGGAAGAAG AGGAGGAATG TGAAACTATG ACTATAGGAG AGTCTGTACG TGATGATCTG TATGATGAGA AAGTGGATGA AGAGGCTGAG GAAAAAATGC TGGAGAAATA TAAACAACAA AGACTGGAAG AGATGTTCCC AGATGAAGTA GATACCCCCC GTGATGTGGC TGCTAGAATT CGATTTCAGA AATACAGAGG CCTTAAGAGC TTCCGGACAT CTCCGTGGGA TCCTAAGGAA AACCTCCCTC GAGATTATGC TCGGATCTTT CAGTTTCAGA ACTTTATTAA TACCCGGAGA CGCATCTTTA AAGAGATTGA AGAAAAAGAA GTTGAAGGAG CTGAGGTTGG CTGGTATGTC ACACTTCATG TCTCTGAAGT CCCAGTCTCA GTGGTTGAGC ACTTCAAGCG AGGCACACCC TTGATTGCAT TTTCGTTACT ACCTCATGAA CAGAAAATGT CAGTACTTAA TATGGTGGTG AGCCGGCACC CTGGCAACAC TGAACCCGTG AAAGCTAAAG AGGAGCTGAT CTTCCACTGT GGATTCAGGC GCTTCCGAGC CTCACCTTTA TTCTCTCAGC ACACTGCAGC GGATAAACAT AAATTTCAGA GGTTCCTGAC TGCAGACACA GCCCTGGTGG TGACAGTATA TGCCCCGATC ACTTTTCCTC CTGCATCTGT GCTGCTTTTC AAACAGAACA GCAATGGAAT GCACAGCCTC ATTGCCACAG GCCATCTCTT GTCAGTGGAT CCAGACAGGA TGGTCATCAA GAGAGTTGTT CTGAGTGGTC ATCCTTTCAA AATTTTTACT AAGACGGCAG TGGTGCGTTA CATGTTTTTC AACAGAGAGG ATGTACTGTG GTTTAAACCT GTGGAACTGA GAACAAAATG GGGCCGCAGG GGCCACATCA AGGAGCCTTT GGGTACTCAT GGTCACATGA AGTGCAGTTT TGATGGGAAG CTAAAATCTC AGGACACAGT ACTGATGAAT CTTTATAAGA GAGTTTTCCC CAAGTGGACT TACGATCCAT ATGTACCAGA ACCAGTCCCC TGGGTTAAAA GTGCGATTTC TTCAACACTG CCTGAAGTGG ACATGGAGTA G |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_010814124.1 |
CDS | 281..2251 |
Translation | |
Target ORF information:
RefSeq Version | XM_010815822.2 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus TSR1, 20S rRNA accumulation, homolog (S. cerevisiae) (TSR1), transcript variant X2, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_010815822.2 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921
| ATGGCTAAAG TGGCTGATAC CATCCTGTTC CTCCTTGATC CACTAGAAGG CTGGGATAGC ACCGGGGATT ACTGCCTTTC TTGCCTGTTT GCTCAGGGCC TTCCCACCTA TACATTAGCT GTCCAAGGGA TTTCTAGCCT CCCGCCGAAG AAACAAATAG ATGCCAGAAA AAAGCTAAGT AAAGCAGTGG AGAAGCGCTT TCCTGAGGAC AAACTCCTCC TGTTAGATAC TCAGCAGGAG GCAGGGATGC TGCTCAGGCA GTTGGCTAAC CAAAAACAGC GGCATCTTGC CTTTCGAGAT CGGCGTGCCT ATCTGTTTGC TCATGCTGCT GAGTTTGTGC CTAGTGAAGA GAGTGACTTG GTGGGCACCT TGAAGATCTC AGGCTATGTT CGTGGTCAGG CTCTGAATGT AAATAGCGTG CTGCATATCA TTGGACATGG TGATTTCCAG ATGAAGCAGG TAGATGCCCC TGTGGACCCT TTCCCTTTAA ATCCGAGAGT GATCAAATCC TCAAAGGACT CAGGCACGGC AATGGAGATT TGTGCTGCAG ATGCTGTAGC TCGTATGGAG GAAGACCTGA AGGTTCTAAT GAAGGCAGAC CCTGATAGAC AAGAATCTTT GCAAACAGAG GTTATCCCAG ATCCAATGGA GGGGGAACAG ACCTGGCCCA CAGAGGAGGA GCTGAGCGAG GCACATGACT TACTGAAGGA AAGTTCCAAG GTAGTGAAGA AGGTTCCCAA AGGAACATCC AGTTATCAAG CTGAATGGAT TCTGGATGAG GATGGTGAAA GTGGTGGGGA AGGAGATGAG TACGATGATA TAGAACACGA GGATTTTATG GAAGAGGAAT CTCAGGATGA GGGTAGTGAA GAGGAAGAAG AGGAGGAATG TGAAACTATG ACTATAGGAG AGTCTGTACG TGATGATCTG TATGATGAGA AAGTGGATGA AGAGGCTGAG GAAAAAATGC TGGAGAAATA TAAACAACAA AGACTGGAAG AGATGTTCCC AGATGAAGTA GATACCCCCC GTGATGTGGC TGCTAGAATT CGATTTCAGA AATACAGAGG CCTTAAGAGC TTCCGGACAT CTCCGTGGGA TCCTAAGGAA AACCTCCCTC GAGATTATGC TCGGATCTTT CAGTTTCAGA ACTTTATTAA TACCCGGAGA CGCATCTTTA AAGAGATTGA AGAAAAAGAA GTTGAAGGAG CTGAGGTTGG CTGGTATGTC ACACTTCATG TCTCTGAAGT CCCAGTCTCA GTGGTTGAGC ACTTCAAGCG AGGCACACCC TTGATTGCAT TTTCGTTACT ACCTCATGAA CAGAAAATGT CAGTACTTAA TATGGTGGTG AGCCGGCACC CTGGCAACAC TGAACCCGTG AAAGCTAAAG AGGAGCTGAT CTTCCACTGT GGATTCAGGC GCTTCCGAGC CTCACCTTTA TTCTCTCAGC ACACTGCAGC GGATAAACAT AAATTTCAGA GGTTCCTGAC TGCAGACACA GCCCTGGTGG TGACAGTATA TGCCCCGATC ACTTTTCCTC CTGCATCTGT GCTGCTTTTC AAACAGAACA GCAATGGAAT GCACAGCCTC ATTGCCACAG GCCATCTCTT GTCAGTGGAT CCAGACAGGA TGGTCATCAA GAGAGTTGTT CTGAGTGGTC ATCCTTTCAA AATTTTTACT AAGACGGCAG TGGTGCGTTA CATGTTTTTC AACAGAGAGG ATGTACTGTG GTTTAAACCT GTGGAACTGA GAACAAAATG GGGCCGCAGG GGCCACATCA AGGAGCCTTT GGGTACTCAT GGTCACATGA AGTGCAGTTT TGATGGGAAG CTAAAATCTC AGGACACAGT ACTGATGAAT CTTTATAAGA GAGTTTTCCC CAAGTGGACT TACGATCCAT ATGTACCAGA ACCAGTCCCC TGGGTTAAAA GTGCGATTTC TTCAACACTG CCTGAAGTGG ACATGGAGTA G |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa29520 |
Clone ID Related Accession (Same CDS sequence) |
XM_005220084.3
|
Accession Version |
XM_005220084.3 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 2415bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-01-25 |
Organism |
Bos taurus(cattle) |
Product |
pre-rRNA-processing protein TSR1 homolog isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104492.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jan 26, 2016 this sequence version replaced XM_005220084.2.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Bos taurus Annotation Release 105
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 6.5
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401
| ATGGCGGTCC ATCGCTCTGG CCCGCTTAAG CAGCAGAATA AAGCGCATAA AGGCGGGCGG CATCGGGGTC GAGGGTCCGC GCAGCGAGAC GGCAAGGGCC GTCTAGCACC GAAAACCCTA AGCAAGAAGG TGAGAAAAGA TCTCAGCAGG GTGGACCAGA GGCATCGCGC CAGCCAGCTC CGAAAGCAGA AGAAGGAGGC GGTTTTGGCA GAAAAGAGAC AGCTTGGCAG CAAGGATGGC CCTCCTCATC AGGTACTGGT GGTGCCCCTG CACAACAGGA TTTCCCTGCC AGAGGCCTTT CAGCTGCTTC AGGATAGGGA CACTGGAACT GTACACTTGA ATGAATGGGG AAGCACCCAT AGCTTTATGC TATTATGCCC CCGCTTGAAA CATCGGTGGT TTTTCACATC AGCAAGGCCA GGGGATCTGC ACACTGTGTT AGACATGGCT AAAGTGGCTG ATACCATCCT GTTCCTCCTT GATCCACTAG AAGGCTGGGA TAGCACCGGG GATTACTGCC TTTCTTGCCT GTTTGCTCAG GGCCTTCCCA CCTATACATT AGCTGTCCAA GGGATTTCTA GCCTCCCGCC GAAGAAACAA ATAGATGCCA GAAAAAAGCT AAGTAAAGCA GTGGAGAAGC GCTTTCCTGA GGACAAACTC CTCCTGTTAG ATACTCAGCA GGAGGCAGGG ATGCTGCTCA GGCAGTTGGC TAACCAAAAA CAGCGGCATC TTGCCTTTCG AGATCGGCGT GCCTATCTGT TTGCTCATGC TGCTGAGTTT GTGCCTAGTG AAGAGAGTGA CTTGGTGGGC ACCTTGAAGA TCTCAGGCTA TGTTCGTGGT CAGGCTCTGA ATGTAAATAG CGTGCTGCAT ATCATTGGAC ATGGTGATTT CCAGATGAAG CAGGTAGATG CCCCTGTGGA CCCTTTCCCT TTAAATCCGA GAGTGATCAA ATCCTCAAAG GACTCAGGCA CGGCAATGGA GATTTGTGCT GCAGATGCTG TAGCTCGTAT GGAGGAAGAC CTGAAGGTTC TAATGAAGGC AGACCCTGAT AGACAAGAAT CTTTGCAAAC AGAGGTTATC CCAGATCCAA TGGAGGGGGA ACAGACCTGG CCCACAGAGG AGGAGCTGAG CGAGGCACAT GACTTACTGA AGGAAAGTTC CAAGGTAGTG AAGAAGGTTC CCAAAGGAAC ATCCAGTTAT CAAGCTGAAT GGATTCTGGA TGAGGATGGT GAAAGTGGTG GGGAAGGAGA TGAGTACGAT GATATAGAAC ACGAGGATTT TATGGAAGAG GAATCTCAGG ATGAGGGTAG TGAAGAGGAA GAAGAGGAGG AATGTGAAAC TATGACTATA GGAGAGTCTG TACGTGATGA TCTGTATGAT GAGAAAGTGG ATGAAGAGGC TGAGGAAAAA ATGCTGGAGA AATATAAACA ACAAAGACTG GAAGAGATGT TCCCAGATGA AGTAGATACC CCCCGTGATG TGGCTGCTAG AATTCGATTT CAGAAATACA GAGGCCTTAA GAGCTTCCGG ACATCTCCGT GGGATCCTAA GGAAAACCTC CCTCGAGATT ATGCTCGGAT CTTTCAGTTT CAGAACTTTA TTAATACCCG GAGACGCATC TTTAAAGAGA TTGAAGAAAA AGAAGTTGAA GGAGCTGAGG TTGGCTGGTA TGTCACACTT CATGTCTCTG AAGTCCCAGT CTCAGTGGTT GAGCACTTCA AGCGAGGCAC ACCCTTGATT GCATTTTCGT TACTACCTCA TGAACAGAAA ATGTCAGTAC TTAATATGGT GGTGAGCCGG CACCCTGGCA ACACTGAACC CGTGAAAGCT AAAGAGGAGC TGATCTTCCA CTGTGGATTC AGGCGCTTCC GAGCCTCACC TTTATTCTCT CAGCACACTG CAGCGGATAA ACATAAATTT CAGAGGTTCC TGACTGCAGA CACAGCCCTG GTGGTGACAG TATATGCCCC GATCACTTTT CCTCCTGCAT CTGTGCTGCT TTTCAAACAG AACAGCAATG GAATGCACAG CCTCATTGCC ACAGGCCATC TCTTGTCAGT GGATCCAGAC AGGATGGTCA TCAAGAGAGT TGTTCTGAGT GGTCATCCTT TCAAAATTTT TACTAAGACG GCAGTGGTGC GTTACATGTT TTTCAACAGA GAGGATGTAC TGTGGTTTAA ACCTGTGGAA CTGAGAACAA AATGGGGCCG CAGGGGCCAC ATCAAGGAGC CTTTGGGTAC TCATGGTCAC ATGAAGTGCA GTTTTGATGG GAAGCTAAAA TCTCAGGACA CAGTACTGAT GAATCTTTAT AAGAGAGTTT TCCCCAAGTG GACTTACGAT CCATATGTAC CAGAACCAGT CCCCTGGGTT AAAAGTGCGA TTTCTTCAAC ACTGCCTGAA GTGGACATGG AGTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_005220141.1 |
CDS | 44..2458 |
Translation | |
Target ORF information:
RefSeq Version | XM_005220084.3 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus TSR1, 20S rRNA accumulation, homolog (S. cerevisiae) (TSR1), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_005220084.3 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401
| ATGGCGGTCC ATCGCTCTGG CCCGCTTAAG CAGCAGAATA AAGCGCATAA AGGCGGGCGG CATCGGGGTC GAGGGTCCGC GCAGCGAGAC GGCAAGGGCC GTCTAGCACC GAAAACCCTA AGCAAGAAGG TGAGAAAAGA TCTCAGCAGG GTGGACCAGA GGCATCGCGC CAGCCAGCTC CGAAAGCAGA AGAAGGAGGC GGTTTTGGCA GAAAAGAGAC AGCTTGGCAG CAAGGATGGC CCTCCTCATC AGGTACTGGT GGTGCCCCTG CACAACAGGA TTTCCCTGCC AGAGGCCTTT CAGCTGCTTC AGGATAGGGA CACTGGAACT GTACACTTGA ATGAATGGGG AAGCACCCAT AGCTTTATGC TATTATGCCC CCGCTTGAAA CATCGGTGGT TTTTCACATC AGCAAGGCCA GGGGATCTGC ACACTGTGTT AGACATGGCT AAAGTGGCTG ATACCATCCT GTTCCTCCTT GATCCACTAG AAGGCTGGGA TAGCACCGGG GATTACTGCC TTTCTTGCCT GTTTGCTCAG GGCCTTCCCA CCTATACATT AGCTGTCCAA GGGATTTCTA GCCTCCCGCC GAAGAAACAA ATAGATGCCA GAAAAAAGCT AAGTAAAGCA GTGGAGAAGC GCTTTCCTGA GGACAAACTC CTCCTGTTAG ATACTCAGCA GGAGGCAGGG ATGCTGCTCA GGCAGTTGGC TAACCAAAAA CAGCGGCATC TTGCCTTTCG AGATCGGCGT GCCTATCTGT TTGCTCATGC TGCTGAGTTT GTGCCTAGTG AAGAGAGTGA CTTGGTGGGC ACCTTGAAGA TCTCAGGCTA TGTTCGTGGT CAGGCTCTGA ATGTAAATAG CGTGCTGCAT ATCATTGGAC ATGGTGATTT CCAGATGAAG CAGGTAGATG CCCCTGTGGA CCCTTTCCCT TTAAATCCGA GAGTGATCAA ATCCTCAAAG GACTCAGGCA CGGCAATGGA GATTTGTGCT GCAGATGCTG TAGCTCGTAT GGAGGAAGAC CTGAAGGTTC TAATGAAGGC AGACCCTGAT AGACAAGAAT CTTTGCAAAC AGAGGTTATC CCAGATCCAA TGGAGGGGGA ACAGACCTGG CCCACAGAGG AGGAGCTGAG CGAGGCACAT GACTTACTGA AGGAAAGTTC CAAGGTAGTG AAGAAGGTTC CCAAAGGAAC ATCCAGTTAT CAAGCTGAAT GGATTCTGGA TGAGGATGGT GAAAGTGGTG GGGAAGGAGA TGAGTACGAT GATATAGAAC ACGAGGATTT TATGGAAGAG GAATCTCAGG ATGAGGGTAG TGAAGAGGAA GAAGAGGAGG AATGTGAAAC TATGACTATA GGAGAGTCTG TACGTGATGA TCTGTATGAT GAGAAAGTGG ATGAAGAGGC TGAGGAAAAA ATGCTGGAGA AATATAAACA ACAAAGACTG GAAGAGATGT TCCCAGATGA AGTAGATACC CCCCGTGATG TGGCTGCTAG AATTCGATTT CAGAAATACA GAGGCCTTAA GAGCTTCCGG ACATCTCCGT GGGATCCTAA GGAAAACCTC CCTCGAGATT ATGCTCGGAT CTTTCAGTTT CAGAACTTTA TTAATACCCG GAGACGCATC TTTAAAGAGA TTGAAGAAAA AGAAGTTGAA GGAGCTGAGG TTGGCTGGTA TGTCACACTT CATGTCTCTG AAGTCCCAGT CTCAGTGGTT GAGCACTTCA AGCGAGGCAC ACCCTTGATT GCATTTTCGT TACTACCTCA TGAACAGAAA ATGTCAGTAC TTAATATGGT GGTGAGCCGG CACCCTGGCA ACACTGAACC CGTGAAAGCT AAAGAGGAGC TGATCTTCCA CTGTGGATTC AGGCGCTTCC GAGCCTCACC TTTATTCTCT CAGCACACTG CAGCGGATAA ACATAAATTT CAGAGGTTCC TGACTGCAGA CACAGCCCTG GTGGTGACAG TATATGCCCC GATCACTTTT CCTCCTGCAT CTGTGCTGCT TTTCAAACAG AACAGCAATG GAATGCACAG CCTCATTGCC ACAGGCCATC TCTTGTCAGT GGATCCAGAC AGGATGGTCA TCAAGAGAGT TGTTCTGAGT GGTCATCCTT TCAAAATTTT TACTAAGACG GCAGTGGTGC GTTACATGTT TTTCAACAGA GAGGATGTAC TGTGGTTTAA ACCTGTGGAA CTGAGAACAA AATGGGGCCG CAGGGGCCAC ATCAAGGAGC CTTTGGGTAC TCATGGTCAC ATGAAGTGCA GTTTTGATGG GAAGCTAAAA TCTCAGGACA CAGTACTGAT GAATCTTTAT AAGAGAGTTT TCCCCAAGTG GACTTACGAT CCATATGTAC CAGAACCAGT CCCCTGGGTT AAAAGTGCGA TTTCTTCAAC ACTGCCTGAA GTGGACATGG AGTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa226187 |
Clone ID Related Accession (Same CDS sequence) |
XM_005220084.4
|
Accession Version |
XM_005220084.4 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 2415bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-06 |
Organism |
Bos taurus(cattle) |
Product |
pre-rRNA-processing protein TSR1 homolog isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037346.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On May 7, 2018 this sequence version replaced XM_005220084.3.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Bos taurus Annotation Release 106
Annotation Version :: 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401
| ATGGCGGTCC ATCGCTCTGG CCCGCTTAAG CAGCAGAATA AAGCGCATAA AGGCGGGCGG CATCGGGGTC GAGGGTCCGC GCAGCGAGAC GGCAAGGGCC GTCTAGCACC GAAAACCCTA AGCAAGAAGG TGAGAAAAGA TCTCAGCAGG GTGGACCAGA GGCATCGCGC CAGCCAGCTC CGAAAGCAGA AGAAGGAGGC GGTTTTGGCA GAAAAGAGAC AGCTTGGCAG CAAGGATGGC CCTCCTCATC AGGTACTGGT GGTGCCCCTG CACAACAGGA TTTCCCTGCC AGAGGCCTTT CAGCTGCTTC AGGATAGGGA CACTGGAACT GTACACTTGA ATGAATGGGG AAGCACCCAT AGCTTTATGC TATTATGCCC CCGCTTGAAA CATCGGTGGT TTTTCACATC AGCAAGGCCA GGGGATCTGC ACACTGTGTT AGACATGGCT AAAGTGGCTG ATACCATCCT GTTCCTCCTT GATCCACTAG AAGGCTGGGA TAGCACCGGG GATTACTGCC TTTCTTGCCT GTTTGCTCAG GGCCTTCCCA CCTATACATT AGCTGTCCAA GGGATTTCTA GCCTCCCGCC GAAGAAACAA ATAGATGCCA GAAAAAAGCT AAGTAAAGCA GTGGAGAAGC GCTTTCCTGA GGACAAACTC CTCCTGTTAG ATACTCAGCA GGAGGCAGGG ATGCTGCTCA GGCAGTTGGC TAACCAAAAA CAGCGGCATC TTGCCTTTCG AGATCGGCGT GCCTATCTGT TTGCTCATGC TGCTGAGTTT GTGCCTAGTG AAGAGAGTGA CTTGGTGGGC ACCTTGAAGA TCTCAGGCTA TGTTCGTGGT CAGGCTCTGA ATGTAAATAG CGTGCTGCAT ATCATTGGAC ATGGTGATTT CCAGATGAAG CAGGTAGATG CCCCTGTGGA CCCTTTCCCT TTAAATCCGA GAGTGATCAA ATCCTCAAAG GACTCAGGCA CGGCAATGGA GATTTGTGCT GCAGATGCTG TAGCTCGTAT GGAGGAAGAC CTGAAGGTTC TAATGAAGGC AGACCCTGAT AGACAAGAAT CTTTGCAAAC AGAGGTTATC CCAGATCCAA TGGAGGGGGA ACAGACCTGG CCCACAGAGG AGGAGCTGAG CGAGGCACAT GACTTACTGA AGGAAAGTTC CAAGGTAGTG AAGAAGGTTC CCAAAGGAAC ATCCAGTTAT CAAGCTGAAT GGATTCTGGA TGAGGATGGT GAAAGTGGTG GGGAAGGAGA TGAGTACGAT GATATAGAAC ACGAGGATTT TATGGAAGAG GAATCTCAGG ATGAGGGTAG TGAAGAGGAA GAAGAGGAGG AATGTGAAAC TATGACTATA GGAGAGTCTG TACGTTATGA TCTGTATGAT GAGAAAGTGG ATGAAGAGGC TGAGGAAAAA ATGCTGGAGA AATATAAACA ACAAAGACTG GAAGAGATGT TCCCAGATGA AGTAGATACC CCCCGTGATG TGGCTGCTAG AATTCGATTT CAGAAATACA GAGGCCTTAA GAGCTTCCGG ACATCTCCGT GGGATCCTAA GGAAAACCTC CCTCGAGATT ATGCTCGGAT CTTTCAGTTT CAGAACTTTA TTAATACCCG GAGACGCATC TTTAAAGAGA TTGAAGAAAA AGAAGTTGAA GGAGCTGAGG TTGGCTGGTA TGTCACACTT CATGTCTCTG AAGTCCCAGT CTCAGTGGTT GAGCACTTCA AGCGAGGCAC ACCCTTGATT GCATTTTCGT TACTACCTCA TGAACAGAAA ATGTCAGTAC TTAATATGGT GGTGAGCCGG CACCCTGGCA ACACTGAACC CGTGAAAGCT AAAGAGGAGC TGATCTTCCA CTGTGGATTC AGGCGCTTCC GAGCCTCACC TTTATTCTCT CAGCACACTG CAGCGGATAA ACATAAATTT CAGAGGTTCC TGACTGCAGA CACAGCCCTG GTGGTGACAG TATATGCCCC GATCACTTTT CCTCCTGCAT CTGTGCTGCT TTTCAAACAG AACAGCAATG GAATGCACAG CCTCATTGCC ACAGGCCATC TCTTGTCAGT GGATCCAGAC AGGATGGTCA TCAAGAGAGT TGTTCTGAGT GGTCATCCTT TCAAAATTTT TACTAAGACG GCAGTGGTGC GTTACATGTT TTTCAACAGA GAGGATGTAC TGTGGTTTAA ACCTGTGGAA CTGAGAACAA AATGGGGCCG CAGGGGCCAC ATCAAGGAGC CTTTGGGTAC TCATGGTCAC ATGAAGTGCA GTTTTGATGG GAAGCTAAAA TCTCAGGACA CAGTACTGAT GAATCTTTAT AAGAGAGTTT TCCCCAAGTG GACTTACGAT CCATATGTAC CAGAACCAGT CCCCTGGGTT AAAAGTGCGA TTTCTTCAAC ACTGCCTGAA GTGGACATGG AGTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_005220141.2 |
CDS | 62..2476 |
Translation | |
Target ORF information:
RefSeq Version | XM_005220084.4 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus TSR1, ribosome maturation factor (TSR1), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_005220084.4 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401
| ATGGCGGTCC ATCGCTCTGG CCCGCTTAAG CAGCAGAATA AAGCGCATAA AGGCGGGCGG CATCGGGGTC GAGGGTCCGC GCAGCGAGAC GGCAAGGGCC GTCTAGCACC GAAAACCCTA AGCAAGAAGG TGAGAAAAGA TCTCAGCAGG GTGGACCAGA GGCATCGCGC CAGCCAGCTC CGAAAGCAGA AGAAGGAGGC GGTTTTGGCA GAAAAGAGAC AGCTTGGCAG CAAGGATGGC CCTCCTCATC AGGTACTGGT GGTGCCCCTG CACAACAGGA TTTCCCTGCC AGAGGCCTTT CAGCTGCTTC AGGATAGGGA CACTGGAACT GTACACTTGA ATGAATGGGG AAGCACCCAT AGCTTTATGC TATTATGCCC CCGCTTGAAA CATCGGTGGT TTTTCACATC AGCAAGGCCA GGGGATCTGC ACACTGTGTT AGACATGGCT AAAGTGGCTG ATACCATCCT GTTCCTCCTT GATCCACTAG AAGGCTGGGA TAGCACCGGG GATTACTGCC TTTCTTGCCT GTTTGCTCAG GGCCTTCCCA CCTATACATT AGCTGTCCAA GGGATTTCTA GCCTCCCGCC GAAGAAACAA ATAGATGCCA GAAAAAAGCT AAGTAAAGCA GTGGAGAAGC GCTTTCCTGA GGACAAACTC CTCCTGTTAG ATACTCAGCA GGAGGCAGGG ATGCTGCTCA GGCAGTTGGC TAACCAAAAA CAGCGGCATC TTGCCTTTCG AGATCGGCGT GCCTATCTGT TTGCTCATGC TGCTGAGTTT GTGCCTAGTG AAGAGAGTGA CTTGGTGGGC ACCTTGAAGA TCTCAGGCTA TGTTCGTGGT CAGGCTCTGA ATGTAAATAG CGTGCTGCAT ATCATTGGAC ATGGTGATTT CCAGATGAAG CAGGTAGATG CCCCTGTGGA CCCTTTCCCT TTAAATCCGA GAGTGATCAA ATCCTCAAAG GACTCAGGCA CGGCAATGGA GATTTGTGCT GCAGATGCTG TAGCTCGTAT GGAGGAAGAC CTGAAGGTTC TAATGAAGGC AGACCCTGAT AGACAAGAAT CTTTGCAAAC AGAGGTTATC CCAGATCCAA TGGAGGGGGA ACAGACCTGG CCCACAGAGG AGGAGCTGAG CGAGGCACAT GACTTACTGA AGGAAAGTTC CAAGGTAGTG AAGAAGGTTC CCAAAGGAAC ATCCAGTTAT CAAGCTGAAT GGATTCTGGA TGAGGATGGT GAAAGTGGTG GGGAAGGAGA TGAGTACGAT GATATAGAAC ACGAGGATTT TATGGAAGAG GAATCTCAGG ATGAGGGTAG TGAAGAGGAA GAAGAGGAGG AATGTGAAAC TATGACTATA GGAGAGTCTG TACGTTATGA TCTGTATGAT GAGAAAGTGG ATGAAGAGGC TGAGGAAAAA ATGCTGGAGA AATATAAACA ACAAAGACTG GAAGAGATGT TCCCAGATGA AGTAGATACC CCCCGTGATG TGGCTGCTAG AATTCGATTT CAGAAATACA GAGGCCTTAA GAGCTTCCGG ACATCTCCGT GGGATCCTAA GGAAAACCTC CCTCGAGATT ATGCTCGGAT CTTTCAGTTT CAGAACTTTA TTAATACCCG GAGACGCATC TTTAAAGAGA TTGAAGAAAA AGAAGTTGAA GGAGCTGAGG TTGGCTGGTA TGTCACACTT CATGTCTCTG AAGTCCCAGT CTCAGTGGTT GAGCACTTCA AGCGAGGCAC ACCCTTGATT GCATTTTCGT TACTACCTCA TGAACAGAAA ATGTCAGTAC TTAATATGGT GGTGAGCCGG CACCCTGGCA ACACTGAACC CGTGAAAGCT AAAGAGGAGC TGATCTTCCA CTGTGGATTC AGGCGCTTCC GAGCCTCACC TTTATTCTCT CAGCACACTG CAGCGGATAA ACATAAATTT CAGAGGTTCC TGACTGCAGA CACAGCCCTG GTGGTGACAG TATATGCCCC GATCACTTTT CCTCCTGCAT CTGTGCTGCT TTTCAAACAG AACAGCAATG GAATGCACAG CCTCATTGCC ACAGGCCATC TCTTGTCAGT GGATCCAGAC AGGATGGTCA TCAAGAGAGT TGTTCTGAGT GGTCATCCTT TCAAAATTTT TACTAAGACG GCAGTGGTGC GTTACATGTT TTTCAACAGA GAGGATGTAC TGTGGTTTAA ACCTGTGGAA CTGAGAACAA AATGGGGCCG CAGGGGCCAC ATCAAGGAGC CTTTGGGTAC TCATGGTCAC ATGAAGTGCA GTTTTGATGG GAAGCTAAAA TCTCAGGACA CAGTACTGAT GAATCTTTAT AAGAGAGTTT TCCCCAAGTG GACTTACGAT CCATATGTAC CAGAACCAGT CCCCTGGGTT AAAAGTGCGA TTTCTTCAAC ACTGCCTGAA GTGGACATGG AGTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa226188 |
Clone ID Related Accession (Same CDS sequence) |
XM_024979914.1
|
Accession Version |
XM_024979914.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 2049bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-06 |
Organism |
Bos taurus(cattle) |
Product |
pre-rRNA-processing protein TSR1 homolog isoform X2 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037346.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Bos taurus Annotation Release 106
Annotation Version :: 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041
| ATGCTATTAT GCCCCCGCTT GAAACATCGG TGGTTTTTCA CATCAGCAAG GCCAGGGGAT CTGCACACTG TGTTAGACAT GGCTAAAGTG GCTGATACCA TCCTGTTCCT CCTTGATCCA CTAGAAGGCT GGGATAGCAC CGGGGATTAC TGCCTTTCTT GCCTGTTTGC TCAGGGCCTT CCCACCTATA CATTAGCTGT CCAAGGGATT TCTAGCCTCC CGCCGAAGAA ACAAATAGAT GCCAGAAAAA AGCTAAGTAA AGCAGTGGAG AAGCGCTTTC CTGAGGACAA ACTCCTCCTG TTAGATACTC AGCAGGAGGC AGGGATGCTG CTCAGGCAGT TGGCTAACCA AAAACAGCGG CATCTTGCCT TTCGAGATCG GCGTGCCTAT CTGTTTGCTC ATGCTGCTGA GTTTGTGCCT AGTGAAGAGA GTGACTTGGT GGGCACCTTG AAGATCTCAG GCTATGTTCG TGGTCAGGCT CTGAATGTAA ATAGCGTGCT GCATATCATT GGACATGGTG ATTTCCAGAT GAAGCAGGTA GATGCCCCTG TGGACCCTTT CCCTTTAAAT CCGAGAGTGA TCAAATCCTC AAAGGACTCA GGCACGGCAA TGGAGATTTG TGCTGCAGAT GCTGTAGCTC GTATGGAGGA AGACCTGAAG GTTCTAATGA AGGCAGACCC TGATAGACAA GAATCTTTGC AAACAGAGGT TATCCCAGAT CCAATGGAGG GGGAACAGAC CTGGCCCACA GAGGAGGAGC TGAGCGAGGC ACATGACTTA CTGAAGGAAA GTTCCAAGGT AGTGAAGAAG GTTCCCAAAG GAACATCCAG TTATCAAGCT GAATGGATTC TGGATGAGGA TGGTGAAAGT GGTGGGGAAG GAGATGAGTA CGATGATATA GAACACGAGG ATTTTATGGA AGAGGAATCT CAGGATGAGG GTAGTGAAGA GGAAGAAGAG GAGGAATGTG AAACTATGAC TATAGGAGAG TCTGTACGTT ATGATCTGTA TGATGAGAAA GTGGATGAAG AGGCTGAGGA AAAAATGCTG GAGAAATATA AACAACAAAG ACTGGAAGAG ATGTTCCCAG ATGAAGTAGA TACCCCCCGT GATGTGGCTG CTAGAATTCG ATTTCAGAAA TACAGAGGCC TTAAGAGCTT CCGGACATCT CCGTGGGATC CTAAGGAAAA CCTCCCTCGA GATTATGCTC GGATCTTTCA GTTTCAGAAC TTTATTAATA CCCGGAGACG CATCTTTAAA GAGATTGAAG AAAAAGAAGT TGAAGGAGCT GAGGTTGGCT GGTATGTCAC ACTTCATGTC TCTGAAGTCC CAGTCTCAGT GGTTGAGCAC TTCAAGCGAG GCACACCCTT GATTGCATTT TCGTTACTAC CTCATGAACA GAAAATGTCA GTACTTAATA TGGTGGTGAG CCGGCACCCT GGCAACACTG AACCCGTGAA AGCTAAAGAG GAGCTGATCT TCCACTGTGG ATTCAGGCGC TTCCGAGCCT CACCTTTATT CTCTCAGCAC ACTGCAGCGG ATAAACATAA ATTTCAGAGG TTCCTGACTG CAGACACAGC CCTGGTGGTG ACAGTATATG CCCCGATCAC TTTTCCTCCT GCATCTGTGC TGCTTTTCAA ACAGAACAGC AATGGAATGC ACAGCCTCAT TGCCACAGGC CATCTCTTGT CAGTGGATCC AGACAGGATG GTCATCAAGA GAGTTGTTCT GAGTGGTCAT CCTTTCAAAA TTTTTACTAA GACGGCAGTG GTGCGTTACA TGTTTTTCAA CAGAGAGGAT GTACTGTGGT TTAAACCTGT GGAACTGAGA ACAAAATGGG GCCGCAGGGG CCACATCAAG GAGCCTTTGG GTACTCATGG TCACATGAAG TGCAGTTTTG ATGGGAAGCT AAAATCTCAG GACACAGTAC TGATGAATCT TTATAAGAGA GTTTTCCCCA AGTGGACTTA CGATCCATAT GTACCAGAAC CAGTCCCCTG GGTTAAAAGT GCGATTTCTT CAACACTGCC TGAAGTGGAC ATGGAGTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_024835682.1 |
CDS | 417..2465 |
Translation | |
Target ORF information:
RefSeq Version | XM_024979914.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus TSR1, ribosome maturation factor (TSR1), transcript variant X2, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_024979914.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041
| ATGCTATTAT GCCCCCGCTT GAAACATCGG TGGTTTTTCA CATCAGCAAG GCCAGGGGAT CTGCACACTG TGTTAGACAT GGCTAAAGTG GCTGATACCA TCCTGTTCCT CCTTGATCCA CTAGAAGGCT GGGATAGCAC CGGGGATTAC TGCCTTTCTT GCCTGTTTGC TCAGGGCCTT CCCACCTATA CATTAGCTGT CCAAGGGATT TCTAGCCTCC CGCCGAAGAA ACAAATAGAT GCCAGAAAAA AGCTAAGTAA AGCAGTGGAG AAGCGCTTTC CTGAGGACAA ACTCCTCCTG TTAGATACTC AGCAGGAGGC AGGGATGCTG CTCAGGCAGT TGGCTAACCA AAAACAGCGG CATCTTGCCT TTCGAGATCG GCGTGCCTAT CTGTTTGCTC ATGCTGCTGA GTTTGTGCCT AGTGAAGAGA GTGACTTGGT GGGCACCTTG AAGATCTCAG GCTATGTTCG TGGTCAGGCT CTGAATGTAA ATAGCGTGCT GCATATCATT GGACATGGTG ATTTCCAGAT GAAGCAGGTA GATGCCCCTG TGGACCCTTT CCCTTTAAAT CCGAGAGTGA TCAAATCCTC AAAGGACTCA GGCACGGCAA TGGAGATTTG TGCTGCAGAT GCTGTAGCTC GTATGGAGGA AGACCTGAAG GTTCTAATGA AGGCAGACCC TGATAGACAA GAATCTTTGC AAACAGAGGT TATCCCAGAT CCAATGGAGG GGGAACAGAC CTGGCCCACA GAGGAGGAGC TGAGCGAGGC ACATGACTTA CTGAAGGAAA GTTCCAAGGT AGTGAAGAAG GTTCCCAAAG GAACATCCAG TTATCAAGCT GAATGGATTC TGGATGAGGA TGGTGAAAGT GGTGGGGAAG GAGATGAGTA CGATGATATA GAACACGAGG ATTTTATGGA AGAGGAATCT CAGGATGAGG GTAGTGAAGA GGAAGAAGAG GAGGAATGTG AAACTATGAC TATAGGAGAG TCTGTACGTT ATGATCTGTA TGATGAGAAA GTGGATGAAG AGGCTGAGGA AAAAATGCTG GAGAAATATA AACAACAAAG ACTGGAAGAG ATGTTCCCAG ATGAAGTAGA TACCCCCCGT GATGTGGCTG CTAGAATTCG ATTTCAGAAA TACAGAGGCC TTAAGAGCTT CCGGACATCT CCGTGGGATC CTAAGGAAAA CCTCCCTCGA GATTATGCTC GGATCTTTCA GTTTCAGAAC TTTATTAATA CCCGGAGACG CATCTTTAAA GAGATTGAAG AAAAAGAAGT TGAAGGAGCT GAGGTTGGCT GGTATGTCAC ACTTCATGTC TCTGAAGTCC CAGTCTCAGT GGTTGAGCAC TTCAAGCGAG GCACACCCTT GATTGCATTT TCGTTACTAC CTCATGAACA GAAAATGTCA GTACTTAATA TGGTGGTGAG CCGGCACCCT GGCAACACTG AACCCGTGAA AGCTAAAGAG GAGCTGATCT TCCACTGTGG ATTCAGGCGC TTCCGAGCCT CACCTTTATT CTCTCAGCAC ACTGCAGCGG ATAAACATAA ATTTCAGAGG TTCCTGACTG CAGACACAGC CCTGGTGGTG ACAGTATATG CCCCGATCAC TTTTCCTCCT GCATCTGTGC TGCTTTTCAA ACAGAACAGC AATGGAATGC ACAGCCTCAT TGCCACAGGC CATCTCTTGT CAGTGGATCC AGACAGGATG GTCATCAAGA GAGTTGTTCT GAGTGGTCAT CCTTTCAAAA TTTTTACTAA GACGGCAGTG GTGCGTTACA TGTTTTTCAA CAGAGAGGAT GTACTGTGGT TTAAACCTGT GGAACTGAGA ACAAAATGGG GCCGCAGGGG CCACATCAAG GAGCCTTTGG GTACTCATGG TCACATGAAG TGCAGTTTTG ATGGGAAGCT AAAATCTCAG GACACAGTAC TGATGAATCT TTATAAGAGA GTTTTCCCCA AGTGGACTTA CGATCCATAT GTACCAGAAC CAGTCCCCTG GGTTAAAAGT GCGATTTCTT CAACACTGCC TGAAGTGGAC ATGGAGTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
A whole-genome assembly of the domestic cow, Bos taurus.
Genome biology10(4)R42(2009)
Zimin AV,Delcher AL,Florea L,Kelley DR,Schatz MC,Puiu D,Hanrahan F,Pertea G,Van Tassell CP,Sonstegard TS,Mar?ais G,Roberts M,Subramanian P,Yorke JA,Salzberg SL |