Gene Symbol | VPS53 |
Entrez Gene ID | 512144 |
Full Name | VPS53, GARP complex subunit |
General protein information |
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Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » VPS53 cDNA ORF clone
gRNAs
Gene Symbol | VPS53 |
Entrez Gene ID | 512144 |
Full Name | VPS53, GARP complex subunit |
General protein information |
|
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
NM_001193168.1 | NP_001180097.1 | vacuolar protein sorting-associated protein 53 homolog |
Bos taurus (cattle) | VPS53 | NP_001180097.1 |
Danio rerio (zebrafish) | vps53 | NP_001007459.2 |
Arabidopsis thaliana (thale cress) | AT1G50970 | NP_175510.2 |
Gallus gallus (chicken) | VPS53 | NP_001012824.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP006623 | XP_316653.4 |
Caenorhabditis elegans (roundworm) | vps-53 | NP_001255027.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_01331 | XP_003714256.1 |
Canis lupus familiaris (dog) | VPS53 | XP_548308.2 |
Mus musculus (house mouse) | Vps53 | NP_080940.2 |
Rattus norvegicus (Norway rat) | Vps53 | NP_001099283.1 |
Neurospora crassa | NCU03024 | XP_965410.1 |
Arabidopsis thaliana (thale cress) | HIT1 | NP_564573.3 |
Xenopus tropicalis (tropical clawed frog) | LOC100496110 | XP_002934389.2 |
Pan troglodytes (chimpanzee) | VPS53 | XP_001151796.1 |
Schizosaccharomyces pombe (fission yeast) | vps53 | NP_593341.1 |
Oryza sativa (rice) | Os01g0906200 | NP_001045132.2 |
Homo sapiens (human) | VPS53 | NP_001121631.1 |
Drosophila melanogaster (fruit fly) | CG3338 | NP_608825.2 |
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following VPS53 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the VPS53 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa37828 | |
Clone ID Related Accession (Same CDS sequence) | NM_001193168.1 | |
Accession Version | NM_001193168.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2499bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-01-29 | |
Organism | Bos taurus(cattle) | |
Product | vacuolar protein sorting-associated protein 53 homolog | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from NKLS02000019.1. On Jul 17, 2010 this sequence version replaced XM_869962.4. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR5571254.11487.1, SRR5571259.35560.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145413, SAMN03145414 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGATGGAGG AGGAGGAACT GGAGTTCGTA GAAGAGCTGG AAGCCGTGCT GCAGCTCACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001180097.1 |
CDS | 81..2579 |
Translation |
Target ORF information:
Target ORF information:
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1 | ATGATGGAGG AGGAGGAACT GGAGTTCGTA GAAGAGCTGG AAGCCGTGCT GCAGCTCACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A whole-genome assembly of the domestic cow, Bos taurus. |