Gene Symbol |
PUS3 |
Entrez Gene ID |
515824 |
Full Name |
pseudouridylate synthase 3 |
General protein information |
- Preferred Names
pseudouridylate synthase 3
Names
tRNA pseudouridine(38/39) synthase tRNA pseudouridine synthase 3 tRNA pseudouridylate synthase 3 tRNA-uridine isomerase 3
|
Gene Type |
protein-coding |
Organism |
Bos taurus(cattle) |
mRNA and Protein(s)
mRNA |
Protein |
Name |
XM_010820931.2 |
XP_010819233.1 |
tRNA pseudouridine(38/39) synthase isoform X1 |
XM_010820931.3 |
XP_010819233.1 |
tRNA pseudouridine(38/39) synthase isoform X1 |
NM_001034512.1 |
NP_001029684.1 |
tRNA pseudouridine(38/39) synthase |
NM_001034512.2 |
NP_001029684.1 |
tRNA pseudouridine(38/39) synthase |
Canis lupus familiaris (dog) |
PUS3 |
XP_536533.1 |
Caenorhabditis elegans (roundworm) |
tag-124 |
NP_496062.3 |
Schizosaccharomyces pombe (fission yeast) |
SPAC25B8.05 |
NP_594465.1 |
Xenopus tropicalis (tropical clawed frog) |
pus3 |
NP_988969.1 |
Pan troglodytes (chimpanzee) |
PUS3 |
XP_001148378.1 |
|
PUS3 |
XP_001111887.1 |
Bos taurus (cattle) |
PUS3 |
NP_001029684.1 |
Gallus gallus (chicken) |
PUS3 |
XP_004948004.1 |
Danio rerio (zebrafish) |
pus3 |
NP_956361.1 |
Anopheles gambiae (African malaria mosquito) |
AgaP_AGAP010807 |
XP_318500.4 |
Mus musculus (house mouse) |
Pus3 |
NP_075781.3 |
Kluyveromyces lactis |
KLLA0E14345g |
XP_454596.1 |
Homo sapiens (human) |
PUS3 |
NP_112597.3 |
Rattus norvegicus (Norway rat) |
Pus3 |
NP_001101604.1 |
Drosophila melanogaster (fruit fly) |
CG3045 |
NP_611646.1 |
Saccharomyces cerevisiae (baker's yeast) |
DEG1 |
NP_116655.1 |
Eremothecium gossypii |
AGOS_AGL003W |
NP_986663.2 |
Related articles in PubMed
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following PUS3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PUS3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
OBa42808 |
Clone ID Related Accession (Same CDS sequence) |
NM_001034512.1
, NM_001034512.2
|
Accession Version |
NM_001034512.1 |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1446bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2017-10-21 |
Organism |
Bos taurus(cattle) |
Product |
tRNA pseudouridine(38/39) synthase |
Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC104569.1. On or before Oct 17, 2005 this sequence version replaced XM_876200.1, XM_593911.2, XM_876328.1.
##Evidence-Data-START##
Transcript exon combination :: BC104569.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN00120237, SAMN00120238 [ECO:0000348]
##Evidence-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441
| ATGGCTGAAA ATGACGTAGA CAGAATCCAG ACTGAGAAAC TCCTAAAAAG AGTACAGGAA CTGGAGCAGG AGGTAAAACG ACTTAAAAAA GAACAGGCCA ACAATAAGGA CTCAAACATT AGAGAGAATT CTTCAGGAGC TGGGGGAAAA CCTAAGCGTG CCTTTGATTT CAGTGCTCAC GGTCAAAGAC ATGTAGCTCT AAAGATCGCC TACCTGGGCT GGGGATATCA GGGCTTTGCC AGTCAGGAAA ACACAAGCAA TACAATTGAA GAGAAACTGT TTGAGGCTCT AACCAAGACT CGACTGGTAG AAAACAGGCA GACATCCAAC TATCACCGGT GTGGGCGAAC AGACAAAGGA GTCAGTGCCT TTGGACAGGT GATTTCTCTT GACCTACGTT CTCACATTCC AAAGGGCAGG GATTCTGAGC ATTTTAATTT AAAAAACGAA GTCAATGATG TGGCTACAGA GATCCGTTAT ACCCACATTC TCAATCGGGT ACTCCCTCCA GACATCCGTG TGCTGGCCTG GGCTCCCGTA GAAACTAGCT TCAGTGCTAG GTTCAGCTGT CTTGAGCGGA CCTACCGCTA TTTTTTCCCT CGTGCTAACT TAGACATTGT AACCATGAAC TATGCAGCTC AGAAGTATGT TGGCACACAT GATTTTAGGA ACTTATGTAA AATGGATGTA GCCAATGGGG TGATTAATTT TCAGAGGACT ATCTTGTCTG CTCAAGTACA GCGAGTGGGC CAGAACCTGG GAGAGGAGGG ATGGCAAGAA CCCTTTCAGT TATGCCAGTT TGAAGTGACT GGCCAGGCGT TCCTTTATCA TCAAGTCCGC TGTATGATGG CTGTTCTTTT TCTGATTGGC CAAGGAATGG AGAAGCCAGA GGTTATTGAT GAACTGTTGA ACATAGAGAA AAATCCCCAG AAGCCTCAAT ATAGTATGGC TGTGGAATTT CCTCTAGTCT TATATGACTG TAAGTTTGAA AATATTAAGT GGATCTATGA CCGGGAAGTT CAGGAATTCA ATGTTACCCA CCTTCAGCAA CTATGGGCTA ATCATGCTGT GAAAACTCAG ATGTTGTATA GTATGCTACA AGGCCTGGAC TCTGTTGCAC TACCCTGTGG AACAGGACCA AAGATGGATG GAATGATAGA ATGGAGAAAT GTTAAGCCCT CTGTCACAAA GCAGACCAGT GCCTTTGTAG AAGGAGTGAA AATGCGCACT TATAAGCCCC TAATGGATCG TCCTAAATGC CAAGGATTAG AATCCCGGAT CCAGCATTTT GTACGTAGGG GACGCATTGA ACACCCACAT TTATTCCATG AGGAAGAAAC AAAAGCCAAA AGGGACTGTA GTGACACACT AGAGGAAGAA AATACTGTTT TTGAGAAACC AATGAAGAGA ATTTGTGTTG ATACAGAACT TAAAAGCATC ATTTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001029684.1 |
CDS | 51..1496 |
Translation | |
Target ORF information:
RefSeq Version | NM_001034512.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus pseudouridylate synthase 3 (PUS3), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001034512.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441
| ATGGCTGAAA ATGACGTAGA CAGAATCCAG ACTGAGAAAC TCCTAAAAAG AGTACAGGAA CTGGAGCAGG AGGTAAAACG ACTTAAAAAA GAACAGGCCA ACAATAAGGA CTCAAACATT AGAGAGAATT CTTCAGGAGC TGGGGGAAAA CCTAAGCGTG CCTTTGATTT CAGTGCTCAC GGTCAAAGAC ATGTAGCTCT AAAGATCGCC TACCTGGGCT GGGGATATCA GGGCTTTGCC AGTCAGGAAA ACACAAGCAA TACAATTGAA GAGAAACTGT TTGAGGCTCT AACCAAGACT CGACTGGTAG AAAACAGGCA GACATCCAAC TATCACCGGT GTGGGCGAAC AGACAAAGGA GTCAGTGCCT TTGGACAGGT GATTTCTCTT GACCTACGTT CTCACATTCC AAAGGGCAGG GATTCTGAGC ATTTTAATTT AAAAAACGAA GTCAATGATG TGGCTACAGA GATCCGTTAT ACCCACATTC TCAATCGGGT ACTCCCTCCA GACATCCGTG TGCTGGCCTG GGCTCCCGTA GAAACTAGCT TCAGTGCTAG GTTCAGCTGT CTTGAGCGGA CCTACCGCTA TTTTTTCCCT CGTGCTAACT TAGACATTGT AACCATGAAC TATGCAGCTC AGAAGTATGT TGGCACACAT GATTTTAGGA ACTTATGTAA AATGGATGTA GCCAATGGGG TGATTAATTT TCAGAGGACT ATCTTGTCTG CTCAAGTACA GCGAGTGGGC CAGAACCTGG GAGAGGAGGG ATGGCAAGAA CCCTTTCAGT TATGCCAGTT TGAAGTGACT GGCCAGGCGT TCCTTTATCA TCAAGTCCGC TGTATGATGG CTGTTCTTTT TCTGATTGGC CAAGGAATGG AGAAGCCAGA GGTTATTGAT GAACTGTTGA ACATAGAGAA AAATCCCCAG AAGCCTCAAT ATAGTATGGC TGTGGAATTT CCTCTAGTCT TATATGACTG TAAGTTTGAA AATATTAAGT GGATCTATGA CCGGGAAGTT CAGGAATTCA ATGTTACCCA CCTTCAGCAA CTATGGGCTA ATCATGCTGT GAAAACTCAG ATGTTGTATA GTATGCTACA AGGCCTGGAC TCTGTTGCAC TACCCTGTGG AACAGGACCA AAGATGGATG GAATGATAGA ATGGAGAAAT GTTAAGCCCT CTGTCACAAA GCAGACCAGT GCCTTTGTAG AAGGAGTGAA AATGCGCACT TATAAGCCCC TAATGGATCG TCCTAAATGC CAAGGATTAG AATCCCGGAT CCAGCATTTT GTACGTAGGG GACGCATTGA ACACCCACAT TTATTCCATG AGGAAGAAAC AAAAGCCAAA AGGGACTGTA GTGACACACT AGAGGAAGAA AATACTGTTT TTGAGAAACC AATGAAGAGA ATTTGTGTTG ATACAGAACT TAAAAGCATC ATTTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa42808 |
Clone ID Related Accession (Same CDS sequence) |
NM_001034512.1
, NM_001034512.2
|
Accession Version |
NM_001034512.2 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1446bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-12-24 |
Organism |
Bos taurus(cattle) |
Product |
tRNA pseudouridine(38/39) synthase |
Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC104569.1. On Sep 15, 2018 this sequence version replaced NM_001034512.1.
##Evidence-Data-START##
Transcript exon combination :: BC104569.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN03145444, SAMN03145467 [ECO:0000348]
##Evidence-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441
| ATGGCTGAAA ATGACGTAGA CAGAATCCAG ACTGAGAAAC TCCTAAAAAG AGTACAGGAA CTGGAGCAGG AGGTAAAACG ACTTAAAAAA GAACAGGCCA ACAATAAGGA CTCAAACATT AGAGAGAATT CTTCAGGAGC TGGGGGAAAA CCTAAGCGTG CCTTTGATTT CAGTGCTCAC GGTCAAAGAC ATGTAGCTCT AAAGATCGCC TACCTGGGCT GGGGATATCA GGGCTTTGCC AGTCAGGAAA ACACAAGCAA TACAATTGAA GAGAAACTGT TTGAGGCTCT AACCAAGACT CGACTGGTAG AAAACAGGCA GACATCCAAC TATCACCGGT GTGGGCGAAC AGACAAAGGA GTCAGTGCCT TTGGACAGGT GATTTCTCTT GACCTACGTT CTCACATTCC AAAGGGCAGG GATTCTGAGC ATTTTAATTT AAAAAACGAA GTCAATGATG TGGCTACAGA GATCCGTTAT ACCCACATTC TCAATCGGGT ACTCCCTCCA GACATCCGTG TGCTGGCCTG GGCTCCCGTA GAAACTAGCT TCAGTGCTAG GTTCAGCTGT CTTGAGCGGA CCTACCGCTA TTTTTTCCCT CGTGCTAACT TAGACATTGT AACCATGAAC TATGCAGCTC AGAAGTATGT TGGCACACAT GATTTTAGGA ACTTATGTAA AATGGATGTA GCCAATGGGG TGATTAATTT TCAGAGGACT ATCTTGTCTG CTCAAGTACA GCGAGTGGGC CAGAACCTGG GAGAGGAGGG ATGGCAAGAA CCCTTTCAGT TATGCCAGTT TGAAGTGACT GGCCAGGCGT TCCTTTATCA TCAAGTCCGC TGTATGATGG CTGTTCTTTT TCTGATTGGC CAAGGAATGG AGAAGCCAGA GGTTATTGAT GAACTGTTGA ACATAGAGAA AAATCCCCAG AAGCCTCAAT ATAGTATGGC TGTGGAATTT CCTCTAGTCT TATATGACTG TAAGTTTGAA AATATTAAGT GGATCTATGA CCGGGAAGTT CAGGAATTCA ATGTTACCCA CCTTCAGCAA CTATGGGCTA ATCATGCTGT GAAAACTCAG ATGTTGTATA GTATGCTACA AGGCCTGGAC TCTGTTGCAC TACCCTGTGG AACAGGACCA AAGATGGATG GAATGATAGA ATGGAGAAAT GTTAAGCCCT CTGTCACAAA GCAGACCAGT GCCTTTGTAG AAGGAGTGAA AATGCGCACT TATAAGCCCC TAATGGATCG TCCTAAATGC CAAGGATTAG AATCCCGGAT CCAGCATTTT GTACGTAGGG GACGCATTGA ACACCCACAT TTATTCCATG AGGAAGAAAC AAAAGCCAAA AGGGACTGTA GTGACACACT AGAGGAAGAA AATACTGTTT TTGAGAAACC AATGAAGAGA ATTTGTGTTG ATACAGAACT TAAAAGCATC ATTTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001029684.1 |
CDS | 46..1491 |
Translation | |
Target ORF information:
RefSeq Version | NM_001034512.2 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus pseudouridine synthase 3 (PUS3), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001034512.2 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441
| ATGGCTGAAA ATGACGTAGA CAGAATCCAG ACTGAGAAAC TCCTAAAAAG AGTACAGGAA CTGGAGCAGG AGGTAAAACG ACTTAAAAAA GAACAGGCCA ACAATAAGGA CTCAAACATT AGAGAGAATT CTTCAGGAGC TGGGGGAAAA CCTAAGCGTG CCTTTGATTT CAGTGCTCAC GGTCAAAGAC ATGTAGCTCT AAAGATCGCC TACCTGGGCT GGGGATATCA GGGCTTTGCC AGTCAGGAAA ACACAAGCAA TACAATTGAA GAGAAACTGT TTGAGGCTCT AACCAAGACT CGACTGGTAG AAAACAGGCA GACATCCAAC TATCACCGGT GTGGGCGAAC AGACAAAGGA GTCAGTGCCT TTGGACAGGT GATTTCTCTT GACCTACGTT CTCACATTCC AAAGGGCAGG GATTCTGAGC ATTTTAATTT AAAAAACGAA GTCAATGATG TGGCTACAGA GATCCGTTAT ACCCACATTC TCAATCGGGT ACTCCCTCCA GACATCCGTG TGCTGGCCTG GGCTCCCGTA GAAACTAGCT TCAGTGCTAG GTTCAGCTGT CTTGAGCGGA CCTACCGCTA TTTTTTCCCT CGTGCTAACT TAGACATTGT AACCATGAAC TATGCAGCTC AGAAGTATGT TGGCACACAT GATTTTAGGA ACTTATGTAA AATGGATGTA GCCAATGGGG TGATTAATTT TCAGAGGACT ATCTTGTCTG CTCAAGTACA GCGAGTGGGC CAGAACCTGG GAGAGGAGGG ATGGCAAGAA CCCTTTCAGT TATGCCAGTT TGAAGTGACT GGCCAGGCGT TCCTTTATCA TCAAGTCCGC TGTATGATGG CTGTTCTTTT TCTGATTGGC CAAGGAATGG AGAAGCCAGA GGTTATTGAT GAACTGTTGA ACATAGAGAA AAATCCCCAG AAGCCTCAAT ATAGTATGGC TGTGGAATTT CCTCTAGTCT TATATGACTG TAAGTTTGAA AATATTAAGT GGATCTATGA CCGGGAAGTT CAGGAATTCA ATGTTACCCA CCTTCAGCAA CTATGGGCTA ATCATGCTGT GAAAACTCAG ATGTTGTATA GTATGCTACA AGGCCTGGAC TCTGTTGCAC TACCCTGTGG AACAGGACCA AAGATGGATG GAATGATAGA ATGGAGAAAT GTTAAGCCCT CTGTCACAAA GCAGACCAGT GCCTTTGTAG AAGGAGTGAA AATGCGCACT TATAAGCCCC TAATGGATCG TCCTAAATGC CAAGGATTAG AATCCCGGAT CCAGCATTTT GTACGTAGGG GACGCATTGA ACACCCACAT TTATTCCATG AGGAAGAAAC AAAAGCCAAA AGGGACTGTA GTGACACACT AGAGGAAGAA AATACTGTTT TTGAGAAACC AATGAAGAGA ATTTGTGTTG ATACAGAACT TAAAAGCATC ATTTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa34577 |
Clone ID Related Accession (Same CDS sequence) |
XM_010820931.2
, XM_010820931.3
|
Accession Version |
XM_010820931.2 |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1446bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-01-25 |
Organism |
Bos taurus(cattle) |
Product |
tRNA pseudouridine(38/39) synthase isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104641.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jan 26, 2016 this sequence version replaced XM_010820931.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Bos taurus Annotation Release 105
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 6.5
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441
| ATGGCTGAAA ATGACGTAGA CAGAATCCAG ACTGAGAAAC TCCTAAAAAG AGTACAGGAA CTGGAGCAGG AGGTAAAACG ACTTAAAAAA GAACAGGCCA ACAATAAGGA CTCAAACATT AGAGAGAATT CTTCAGGAGC TGGGGGAAAA CCTAAGCGTG CCTTTGATTT CAGTGCTCAC GGTCAAAGAC ATGTAGCTCT AAAGATCGCC TACCTGGGCT GGGGATATCA GGGCTTTGCC AGTCAGGAAA ACACAAGCAA TACAATTGAA GAGAAACTGT TTGAGGCTCT AACCAAGACT CGACTGGTAG AAAACAGGCA GACATCCAAC TATCACCGGT GTGGGCGAAC AGACAAAGGA GTCAGTGCCT TTGGACAGGT GATTTCTCTT GACCTACGTT CTCACATTCC AAAGGGCAGG GATTCTGAGC ATTTTAATTT AAAAAACGAA GTCAATGATG TGGCTACAGA GATCCGTTAT ACCCACATTC TCAATCGGGT ACTCCCTCCA GACATCCGTG TGCTGGCCTG GGCTCCCGTA GAAACTAGCT TCAGTGCTAG GTTCAGCTGT CTTGAGCGGA CCTACCGCTA TTTTTTCCCT CGTGCTAACT TAGACATTGT AACCATGAAC TATGCAGCTC AGAAGTATGT TGGCACACAT GATTTTAGGA ACTTATGTAA AATGGATGTA GCCAATGGGG TGATTAATTT TCAGAGGACT ATCTTGTCTG CTCAAGTACA GCGAGTGGGC CAGAACCTGG GAGAGGAGGG ATGGCAAGAA CCCTTTCAGT TATGCCAGTT TGAAGTGACT GGCCAGGCGT TCCTTTATCA TCAAGTCCGC TGTATGATGG CTGTTCTTTT TCTGATTGGC CAAGGAATGG AGAAGCCAGA GGTTATTGAT GAACTGTTGA ACATAGAGAA AAATCCCCAG AAGCCTCAAT ATAGTATGGC TGTGGAATTT CCTCTAGTCT TATATGACTG TAAGTTTGAA AATATTAAGT GGATCTATGA CCGGGAAGTT CAGGAATTCA ATGTTACCCA CCTTCAGCAA CTATGGGCTA ATCATGCTGT GAAAACTCAG ATGTTGTATA GTATGCTACA AGGCCTGGAC TCTGTTGCAC TACCCTGTGG AACAGGACCA AAGATGGATG GAATGATAGA ATGGAGAAAT GTTAAGCCCT CTGTCACAAA GCAGACCAGT GCCTTTGTAG AAGGAGTGAA AATGCGCACT TATAAGCCCC TAATGGATCG TCCTAAATGC CAAGGATTAG AATCCCGGAT CCAGCATTTT GTACGTAGGG GACGCATTGA ACACCCACAT TTATTCCATG AGGAAGAAAC AAAAGCCAAA AGGGACTGTA GTGACACACT AGAGGAAGAA AATACTGTTT TTGAGAAACC AACGAAGAGA ATTTGTGTTG ATACAGAACT TAAAAGCATC ATTTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_010819233.1 |
CDS | 351..1796 |
Translation | |
Target ORF information:
RefSeq Version | XM_010820931.2 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus pseudouridylate synthase 3 (PUS3), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_010820931.2 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441
| ATGGCTGAAA ATGACGTAGA CAGAATCCAG ACTGAGAAAC TCCTAAAAAG AGTACAGGAA CTGGAGCAGG AGGTAAAACG ACTTAAAAAA GAACAGGCCA ACAATAAGGA CTCAAACATT AGAGAGAATT CTTCAGGAGC TGGGGGAAAA CCTAAGCGTG CCTTTGATTT CAGTGCTCAC GGTCAAAGAC ATGTAGCTCT AAAGATCGCC TACCTGGGCT GGGGATATCA GGGCTTTGCC AGTCAGGAAA ACACAAGCAA TACAATTGAA GAGAAACTGT TTGAGGCTCT AACCAAGACT CGACTGGTAG AAAACAGGCA GACATCCAAC TATCACCGGT GTGGGCGAAC AGACAAAGGA GTCAGTGCCT TTGGACAGGT GATTTCTCTT GACCTACGTT CTCACATTCC AAAGGGCAGG GATTCTGAGC ATTTTAATTT AAAAAACGAA GTCAATGATG TGGCTACAGA GATCCGTTAT ACCCACATTC TCAATCGGGT ACTCCCTCCA GACATCCGTG TGCTGGCCTG GGCTCCCGTA GAAACTAGCT TCAGTGCTAG GTTCAGCTGT CTTGAGCGGA CCTACCGCTA TTTTTTCCCT CGTGCTAACT TAGACATTGT AACCATGAAC TATGCAGCTC AGAAGTATGT TGGCACACAT GATTTTAGGA ACTTATGTAA AATGGATGTA GCCAATGGGG TGATTAATTT TCAGAGGACT ATCTTGTCTG CTCAAGTACA GCGAGTGGGC CAGAACCTGG GAGAGGAGGG ATGGCAAGAA CCCTTTCAGT TATGCCAGTT TGAAGTGACT GGCCAGGCGT TCCTTTATCA TCAAGTCCGC TGTATGATGG CTGTTCTTTT TCTGATTGGC CAAGGAATGG AGAAGCCAGA GGTTATTGAT GAACTGTTGA ACATAGAGAA AAATCCCCAG AAGCCTCAAT ATAGTATGGC TGTGGAATTT CCTCTAGTCT TATATGACTG TAAGTTTGAA AATATTAAGT GGATCTATGA CCGGGAAGTT CAGGAATTCA ATGTTACCCA CCTTCAGCAA CTATGGGCTA ATCATGCTGT GAAAACTCAG ATGTTGTATA GTATGCTACA AGGCCTGGAC TCTGTTGCAC TACCCTGTGG AACAGGACCA AAGATGGATG GAATGATAGA ATGGAGAAAT GTTAAGCCCT CTGTCACAAA GCAGACCAGT GCCTTTGTAG AAGGAGTGAA AATGCGCACT TATAAGCCCC TAATGGATCG TCCTAAATGC CAAGGATTAG AATCCCGGAT CCAGCATTTT GTACGTAGGG GACGCATTGA ACACCCACAT TTATTCCATG AGGAAGAAAC AAAAGCCAAA AGGGACTGTA GTGACACACT AGAGGAAGAA AATACTGTTT TTGAGAAACC AACGAAGAGA ATTTGTGTTG ATACAGAACT TAAAAGCATC ATTTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa34577 |
Clone ID Related Accession (Same CDS sequence) |
XM_010820931.2
, XM_010820931.3
|
Accession Version |
XM_010820931.3 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1446bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-06 |
Organism |
Bos taurus(cattle) |
Product |
tRNA pseudouridine(38/39) synthase isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037356.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On May 7, 2018 this sequence version replaced XM_010820931.2.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Bos taurus Annotation Release 106
Annotation Version :: 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441
| ATGGCTGAAA ATGACGTAGA CAGAATCCAG ACTGAGAAAC TCCTAAAAAG AGTACAGGAA CTGGAGCAGG AGGTAAAACG ACTTAAAAAA GAACAGGCCA ACAATAAGGA CTCAAACATT AGAGAGAATT CTTCAGGAGC TGGGGGAAAA CCTAAGCGTG CCTTTGATTT CAGTGCTCAC GGTCAAAGAC ATGTAGCTCT AAAGATCGCC TACCTGGGCT GGGGATATCA GGGCTTTGCC AGTCAGGAAA ACACAAGCAA TACAATTGAA GAGAAACTGT TTGAGGCTCT AACCAAGACT CGACTGGTAG AAAACAGGCA GACATCCAAC TATCACCGGT GTGGGCGAAC AGACAAAGGA GTCAGTGCCT TTGGACAGGT GATTTCTCTT GACCTACGTT CTCACATTCC AAAGGGCAGG GATTCTGAGC ATTTTAATTT AAAAAACGAA GTCAATGATG TGGCTACAGA GATCCGTTAT ACCCACATTC TCAATCGGGT ACTCCCTCCA GACATCCGTG TGCTGGCCTG GGCTCCCGTA GAAACTAGCT TCAGTGCTAG GTTCAGCTGT CTTGAGCGGA CCTACCGCTA TTTTTTCCCT CGTGCTAACT TAGACATTGT AACCATGAAC TATGCAGCTC AGAAGTATGT TGGCACACAT GATTTTAGGA ACTTATGTAA AATGGATGTA GCCAATGGGG TGATTAATTT TCAGAGGACT ATCTTGTCTG CTCAAGTACA GCGAGTGGGC CAGAACCTGG GAGAGGAGGG ATGGCAAGAA CCCTTTCAGT TATGCCAGTT TGAAGTGACT GGCCAGGCGT TCCTTTATCA TCAAGTCCGC TGTATGATGG CTGTTCTTTT TCTGATTGGC CAAGGAATGG AGAAGCCAGA GGTTATTGAT GAACTGTTGA ACATAGAGAA AAATCCCCAG AAGCCTCAAT ATAGTATGGC TGTGGAATTT CCTCTAGTCT TATATGACTG TAAGTTTGAA AATATTAAGT GGATCTATGA CCGGGAAGTT CAGGAATTCA ATGTTACCCA CCTTCAGCAA CTATGGGCTA ATCATGCTGT GAAAACTCAG ATGTTGTATA GTATGCTACA AGGCCTGGAC TCTGTTGCAC TACCCTGTGG AACAGGACCA AAGATGGATG GAATGATAGA ATGGAGAAAT GTTAAGCCCT CTGTCACAAA GCAGACCAGT GCCTTTGTAG AAGGAGTGAA AATGCGCACT TATAAGCCCC TAATGGATCG TCCTAAATGC CAAGGATTAG AATCCCGGAT CCAGCATTTT GTACGTAGGG GACGCATTGA ACACCCACAT TTATTCCATG AGGAAGAAAC AAAAGCCAAA AGGGACTGTA GTGACACACT AGAGGAAGAA AATACTGTTT TTGAGAAACC AACGAAGAGA ATTTGTGTTG ATACAGAACT TAAAAGCATC ATTTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_010819233.1 |
CDS | 185..1630 |
Translation | |
Target ORF information:
RefSeq Version | XM_010820931.3 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus pseudouridylate synthase 3 (PUS3), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_010820931.3 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441
| ATGGCTGAAA ATGACGTAGA CAGAATCCAG ACTGAGAAAC TCCTAAAAAG AGTACAGGAA CTGGAGCAGG AGGTAAAACG ACTTAAAAAA GAACAGGCCA ACAATAAGGA CTCAAACATT AGAGAGAATT CTTCAGGAGC TGGGGGAAAA CCTAAGCGTG CCTTTGATTT CAGTGCTCAC GGTCAAAGAC ATGTAGCTCT AAAGATCGCC TACCTGGGCT GGGGATATCA GGGCTTTGCC AGTCAGGAAA ACACAAGCAA TACAATTGAA GAGAAACTGT TTGAGGCTCT AACCAAGACT CGACTGGTAG AAAACAGGCA GACATCCAAC TATCACCGGT GTGGGCGAAC AGACAAAGGA GTCAGTGCCT TTGGACAGGT GATTTCTCTT GACCTACGTT CTCACATTCC AAAGGGCAGG GATTCTGAGC ATTTTAATTT AAAAAACGAA GTCAATGATG TGGCTACAGA GATCCGTTAT ACCCACATTC TCAATCGGGT ACTCCCTCCA GACATCCGTG TGCTGGCCTG GGCTCCCGTA GAAACTAGCT TCAGTGCTAG GTTCAGCTGT CTTGAGCGGA CCTACCGCTA TTTTTTCCCT CGTGCTAACT TAGACATTGT AACCATGAAC TATGCAGCTC AGAAGTATGT TGGCACACAT GATTTTAGGA ACTTATGTAA AATGGATGTA GCCAATGGGG TGATTAATTT TCAGAGGACT ATCTTGTCTG CTCAAGTACA GCGAGTGGGC CAGAACCTGG GAGAGGAGGG ATGGCAAGAA CCCTTTCAGT TATGCCAGTT TGAAGTGACT GGCCAGGCGT TCCTTTATCA TCAAGTCCGC TGTATGATGG CTGTTCTTTT TCTGATTGGC CAAGGAATGG AGAAGCCAGA GGTTATTGAT GAACTGTTGA ACATAGAGAA AAATCCCCAG AAGCCTCAAT ATAGTATGGC TGTGGAATTT CCTCTAGTCT TATATGACTG TAAGTTTGAA AATATTAAGT GGATCTATGA CCGGGAAGTT CAGGAATTCA ATGTTACCCA CCTTCAGCAA CTATGGGCTA ATCATGCTGT GAAAACTCAG ATGTTGTATA GTATGCTACA AGGCCTGGAC TCTGTTGCAC TACCCTGTGG AACAGGACCA AAGATGGATG GAATGATAGA ATGGAGAAAT GTTAAGCCCT CTGTCACAAA GCAGACCAGT GCCTTTGTAG AAGGAGTGAA AATGCGCACT TATAAGCCCC TAATGGATCG TCCTAAATGC CAAGGATTAG AATCCCGGAT CCAGCATTTT GTACGTAGGG GACGCATTGA ACACCCACAT TTATTCCATG AGGAAGAAAC AAAAGCCAAA AGGGACTGTA GTGACACACT AGAGGAAGAA AATACTGTTT TTGAGAAACC AACGAAGAGA ATTTGTGTTG ATACAGAACT TAAAAGCATC ATTTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
A whole-genome assembly of the domestic cow, Bos taurus.
Genome biology10(4)R42(2009)
Zimin AV,Delcher AL,Florea L,Kelley DR,Schatz MC,Puiu D,Hanrahan F,Pertea G,Van Tassell CP,Sonstegard TS,Mar?ais G,Roberts M,Subramanian P,Yorke JA,Salzberg SL |