Gene Symbol |
PTAFR |
Entrez Gene ID |
518283 |
Full Name |
platelet activating factor receptor |
Synonyms |
PAFr |
General protein information |
- Preferred Names
platelet activating factor receptor
Names
platelet-activating factor receptor PAF-R
|
Gene Type |
protein-coding |
Organism |
Bos taurus(cattle) |
mRNA and Protein(s)
mRNA |
Protein |
Name |
XM_005203162.3 |
XP_005203219.1 |
platelet-activating factor receptor isoform X1 |
XM_005203162.4 |
XP_005203219.1 |
platelet-activating factor receptor isoform X1 |
XM_005203163.4 |
XP_005203220.1 |
platelet-activating factor receptor isoform X1 |
XM_025001649.1 |
XP_024857417.1 |
platelet-activating factor receptor isoform X1 |
XM_025001655.1 |
XP_024857423.1 |
platelet-activating factor receptor isoform X1 |
XM_015460325.1 |
XP_015315811.1 |
platelet-activating factor receptor isoform X1 |
XM_005203163.3 |
XP_005203220.1 |
platelet-activating factor receptor isoform X1 |
XM_025001641.1 |
XP_024857409.1 |
platelet-activating factor receptor isoform X1 |
NM_001040538.1 |
NP_001035628.1 |
platelet-activating factor receptor |
|
PTAFR |
XP_001112942.2 |
Canis lupus familiaris (dog) |
PTAFR |
XP_005617766.1 |
Rattus norvegicus (Norway rat) |
Ptafr |
NP_445773.1 |
Xenopus tropicalis (tropical clawed frog) |
ptafr |
NP_001008003.1 |
Homo sapiens (human) |
PTAFR |
NP_000943.1 |
Pan troglodytes (chimpanzee) |
PTAFR |
XP_001151906.1 |
Bos taurus (cattle) |
PTAFR |
NP_001035628.1 |
Mus musculus (house mouse) |
Ptafr |
NP_001074680.1 |
Danio rerio (zebrafish) |
LOC100002627 |
XP_001342372.1 |
Gallus gallus (chicken) |
PTAFR |
XP_004947758.1 |
Related articles in PubMed
Platelet-activating factor-stimulated production of reactive oxygen species in ovarian granulosa cells from periovulatory follicles.
Xu J, Kr?ger B, Vernunft A, L?hrke B, Viergutz T
Cytometry. Part A : the journal of the International Society for Analytical Cytology75(8)658-64(2009 Aug)
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
Role of the platelet-activating factor and its receptor in the proliferative regulation of bovine ovarian granulosa cells.
Viergutz T, L?hrke B
Cell proliferation40(6)949-60(2007 Dec)
Comparison of the coding sequence of the platelet-activating factor receptor gene in three species.
Yang W, Diehl JR, Roudebush WE
DNA sequence : the journal of DNA sequencing and mapping12(4)239-51(2001 Nov)
Fluorometric detection of platelet activating factor receptor in cultured oviductal epithelial and stromal cells and endometrial stromal cells from bovine at different stages of the oestrous cycle and early pregnancy.
Tiemann U, Viergutz T, Jonas L, Wollenhaupt K, P?hland R, Kanitz W
Domestic animal endocrinology20(3)149-64(2001 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following PTAFR gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PTAFR cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGGAGCCAA ATAATTCCTT TCGTGTGGAC TCAGAGTTCC GATACACCCT CTTCCCAATT TTTTACAGCA TCGTCTTTGT GCTGGGGGTC ATTGCCAACA GCTACGTGCT GTGGGTCTTT GCCCGCTTGT ACCCTTCCAA GAAATTCAAC GAGATAAAGA TCTTCATGGT GAACCTCACC ATGGCTGACC TGCTCTTCTT GGTCACCCTG CCCCTGTGGA TCGTCTACTA CTACAACCAG GGTGACTGGA TTCTTCCCAA ATTCCTGTGC AACCTGGCTG GCTGCTTCTT CTTCATTAAC ACCTACTGCT CAGTGGCCTT CCTGGCTGTC ATCACTTACA ACCGCTTCCA GGCAGTGACA AGGCCCATCA AGACTGCTCA GGCTACCACC CGAAAGCGTG GCATCCTTCT GTCCCTGATT ATCTGGGTGT CCATTGTGGG CGCAGCATCC TACTTCTTCG TCCTGGACTC GACCAACAGG GAGCCCAACA AGACTGGCTC AGCCAACATC ACACGCTGCT TTGAACATTA CGAGAAGGGC AGCATCCCGG TCCTCACCAT CCACATCTTC CTGGTGTTCA GCTTCTTCCT CGTCTTCCTC ATCATCCTCT TTTGCAACTT GGTCATCATC CGCACGCTGC TCACGCAGCA GGTGCAAATA CAGCGCAACG CCGAGGTCAA GCGCCGGGCG CTCTGGATGG TCTGCACTGT CCTGGCTGTG TTCATCATCT GTTTCGTGCC CCACCACCTC GTGCAGCTGC CCTGGACCCT GGCCGAGCTG GGCTTCCAGG ACACCGACTT CCACCAGGCG ATTAACGATG CACATCAGGT CACTCTCTGC CTCCTTAGTA CCAACTGTGT CTTAGACCCC ATTATCTACT GTTTCCTCAC CAAGAAGTTC CGCAAGCACC TCACCGAGAA GTTGTACAGT ATGCGCGAGA GCCGGAAGTG CTCCCGGGCC ACCTCGGAGA CGGGCACGGA AGTGGTCATG CAGCTCAAAG ATGTCCCTGT CAAATCCCTC AAATATTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001035628.1 |
CDS | 1..1029 |
Translation | |
Target ORF information:
RefSeq Version | NM_001040538.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus platelet activating factor receptor (PTAFR), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001040538.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGGAGCCAA ATAATTCCTT TCGTGTGGAC TCAGAGTTCC GATACACCCT CTTCCCAATT TTTTACAGCA TCGTCTTTGT GCTGGGGGTC ATTGCCAACA GCTACGTGCT GTGGGTCTTT GCCCGCTTGT ACCCTTCCAA GAAATTCAAC GAGATAAAGA TCTTCATGGT GAACCTCACC ATGGCTGACC TGCTCTTCTT GGTCACCCTG CCCCTGTGGA TCGTCTACTA CTACAACCAG GGTGACTGGA TTCTTCCCAA ATTCCTGTGC AACCTGGCTG GCTGCTTCTT CTTCATTAAC ACCTACTGCT CAGTGGCCTT CCTGGCTGTC ATCACTTACA ACCGCTTCCA GGCAGTGACA AGGCCCATCA AGACTGCTCA GGCTACCACC CGAAAGCGTG GCATCCTTCT GTCCCTGATT ATCTGGGTGT CCATTGTGGG CGCAGCATCC TACTTCTTCG TCCTGGACTC GACCAACAGG GAGCCCAACA AGACTGGCTC AGCCAACATC ACACGCTGCT TTGAACATTA CGAGAAGGGC AGCATCCCGG TCCTCACCAT CCACATCTTC CTGGTGTTCA GCTTCTTCCT CGTCTTCCTC ATCATCCTCT TTTGCAACTT GGTCATCATC CGCACGCTGC TCACGCAGCA GGTGCAAATA CAGCGCAACG CCGAGGTCAA GCGCCGGGCG CTCTGGATGG TCTGCACTGT CCTGGCTGTG TTCATCATCT GTTTCGTGCC CCACCACCTC GTGCAGCTGC CCTGGACCCT GGCCGAGCTG GGCTTCCAGG ACACCGACTT CCACCAGGCG ATTAACGATG CACATCAGGT CACTCTCTGC CTCCTTAGTA CCAACTGTGT CTTAGACCCC ATTATCTACT GTTTCCTCAC CAAGAAGTTC CGCAAGCACC TCACCGAGAA GTTGTACAGT ATGCGCGAGA GCCGGAAGTG CTCCCGGGCC ACCTCGGAGA CGGGCACGGA AGTGGTCATG CAGCTCAAAG ATGTCCCTGT CAAATCCCTC AAATATTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa16951 |
Clone ID Related Accession (Same CDS sequence) |
XM_005203162.3
, XM_005203162.4
, XM_005203163.4
, XM_025001649.1
, XM_025001655.1
, XM_015460325.1
, XM_005203163.3
, XM_025001641.1
|
Accession Version |
XM_005203162.3 |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1059bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-01-25 |
Organism |
Bos taurus(cattle) |
Product |
platelet-activating factor receptor isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003103851.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jan 26, 2016 this sequence version replaced XM_005203162.2.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Bos taurus Annotation Release 105
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 6.5
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGACCAGCC TCTACTTCCA GCACATAGAG ATGGAGCCAA ATAATTCCTT TCGTGTGGAC TCAGAGTTCC GATACACCCT CTTCCCAATT TTTTACAGCA TCGTCTTTGT GCTGGGGGTC ATTGCCAACA GCTACGTGCT GTGGGTCTTT GCCCGCTTGT ACCCTTCCAA GAAATTCAAC GAGATAAAGA TCTTCATGGT GAACCTCACC ATGGCTGACC TGCTCTTCTT GGTCACCCTG CCCCTGTGGA TCGTCTACTA CTACAACCAG GGTGACTGGA TTCTTCCCAA ATTCCTGTGC AACCTGGCTG GCTGCTTCTT CTTCATTAAC ACCTACTGCT CAGTGGCCTT CCTGGCTGTC ATCACTTACA ACCGCTTCCA GGCAGTGACA AGGCCCATCA AGACTGCTCA GGCTACCACC CGAAAGCGTG GCATCCTTCT GTCCCTGATT ATCTGGGTGT CCATTGTGGG CGCAGCATCC TACTTCTTCG TCCTGGACTC GACCAACAGG GAGCCCAACA AGACTGGCTC AGCCAACATC ACACGCTGCT TTGAACATTA CGAGAAGGGC AGCATCCCGG TCCTCACCAT CCACATCTTC CTGGTGTTCA GCTTCTTCCT CGTCTTCCTC ATCATCCTCT TTTGCAACTT GGTCATCATC CGCACGCTGC TCACGCAGCA GGTGCAAATA CAGCGCAACG CCGAGGTCAA GCGCCGGGCG CTCTGGATGG TCTGCACTGT CCTGGCTGTG TTCATCATCT GTTTCGTGCC CCACCACCTC GTGCAGCTGC CCTGGACCCT GGCCGAGCTG GGCTTCCAGG ACACCGACTT CCACCAGGCG ATTAACGATG CACATCAGGT CACTCTCTGC CTCCTTAGTA CCAACTGTGT CTTAGACCCC ATTATCTACT GTTTCCTCAC CAAGAAGTTC CGCAAGCACC TCACCGAGAA GTTGTACAGT ATGCGCGAGA GCCGGAAGTG CTCCCGGGCC ACCTCGGAGA CGGGCACGGA AGTGGTCATG CAGCTCAAAG ATGTCCCTGT CAAATCCCTC AAATATTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_005203219.1 |
CDS | 617..1675 |
Translation | |
Target ORF information:
RefSeq Version | XM_005203162.3 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus platelet-activating factor receptor (PTAFR), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_005203162.3 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGACCAGCC TCTACTTCCA GCACATAGAG ATGGAGCCAA ATAATTCCTT TCGTGTGGAC TCAGAGTTCC GATACACCCT CTTCCCAATT TTTTACAGCA TCGTCTTTGT GCTGGGGGTC ATTGCCAACA GCTACGTGCT GTGGGTCTTT GCCCGCTTGT ACCCTTCCAA GAAATTCAAC GAGATAAAGA TCTTCATGGT GAACCTCACC ATGGCTGACC TGCTCTTCTT GGTCACCCTG CCCCTGTGGA TCGTCTACTA CTACAACCAG GGTGACTGGA TTCTTCCCAA ATTCCTGTGC AACCTGGCTG GCTGCTTCTT CTTCATTAAC ACCTACTGCT CAGTGGCCTT CCTGGCTGTC ATCACTTACA ACCGCTTCCA GGCAGTGACA AGGCCCATCA AGACTGCTCA GGCTACCACC CGAAAGCGTG GCATCCTTCT GTCCCTGATT ATCTGGGTGT CCATTGTGGG CGCAGCATCC TACTTCTTCG TCCTGGACTC GACCAACAGG GAGCCCAACA AGACTGGCTC AGCCAACATC ACACGCTGCT TTGAACATTA CGAGAAGGGC AGCATCCCGG TCCTCACCAT CCACATCTTC CTGGTGTTCA GCTTCTTCCT CGTCTTCCTC ATCATCCTCT TTTGCAACTT GGTCATCATC CGCACGCTGC TCACGCAGCA GGTGCAAATA CAGCGCAACG CCGAGGTCAA GCGCCGGGCG CTCTGGATGG TCTGCACTGT CCTGGCTGTG TTCATCATCT GTTTCGTGCC CCACCACCTC GTGCAGCTGC CCTGGACCCT GGCCGAGCTG GGCTTCCAGG ACACCGACTT CCACCAGGCG ATTAACGATG CACATCAGGT CACTCTCTGC CTCCTTAGTA CCAACTGTGT CTTAGACCCC ATTATCTACT GTTTCCTCAC CAAGAAGTTC CGCAAGCACC TCACCGAGAA GTTGTACAGT ATGCGCGAGA GCCGGAAGTG CTCCCGGGCC ACCTCGGAGA CGGGCACGGA AGTGGTCATG CAGCTCAAAG ATGTCCCTGT CAAATCCCTC AAATATTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa16951 |
Clone ID Related Accession (Same CDS sequence) |
XM_005203162.3
, XM_005203162.4
, XM_005203163.4
, XM_025001649.1
, XM_025001655.1
, XM_015460325.1
, XM_005203163.3
, XM_025001641.1
|
Accession Version |
XM_005203162.4 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1059bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-06 |
Organism |
Bos taurus(cattle) |
Product |
platelet-activating factor receptor isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037329.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On May 7, 2018 this sequence version replaced XM_005203162.3.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Bos taurus Annotation Release 106
Annotation Version :: 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGACCAGCC TCTACTTCCA GCACATAGAG ATGGAGCCAA ATAATTCCTT TCGTGTGGAC TCAGAGTTCC GATACACCCT CTTCCCAATT TTTTACAGCA TCGTCTTTGT GCTGGGGGTC ATTGCCAACA GCTACGTGCT GTGGGTCTTT GCCCGCTTGT ACCCTTCCAA GAAATTCAAC GAGATAAAGA TCTTCATGGT GAACCTCACC ATGGCTGACC TGCTCTTCTT GGTCACCCTG CCCCTGTGGA TCGTCTACTA CTACAACCAG GGTGACTGGA TTCTTCCCAA ATTCCTGTGC AACCTGGCTG GCTGCTTCTT CTTCATTAAC ACCTACTGCT CAGTGGCCTT CCTGGCTGTC ATCACTTACA ACCGCTTCCA GGCAGTGACA AGGCCCATCA AGACTGCTCA GGCTACCACC CGAAAGCGTG GCATCCTTCT GTCCCTGATT ATCTGGGTGT CCATTGTGGG CGCAGCATCC TACTTCTTCG TCCTGGACTC GACCAACAGG GAGCCCAACA AGACTGGCTC AGCCAACATC ACACGCTGCT TTGAACATTA CGAGAAGGGC AGCATCCCGG TCCTCACCAT CCACATCTTC CTGGTGTTCA GCTTCTTCCT CGTCTTCCTC ATCATCCTCT TTTGCAACTT GGTCATCATC CGCACGCTGC TCACGCAGCA GGTGCAAATA CAGCGCAACG CCGAGGTCAA GCGCCGGGCG CTCTGGATGG TCTGCACTGT CCTGGCTGTG TTCATCATCT GTTTCGTGCC CCACCACCTC GTGCAGCTGC CCTGGACCCT GGCCGAGCTG GGCTTCCAGG ACACCGACTT CCACCAGGCG ATTAACGATG CACATCAGGT CACTCTCTGC CTCCTTAGTA CCAACTGTGT CTTAGACCCC ATTATCTACT GTTTCCTCAC CAAGAAGTTC CGCAAGCACC TCACCGAGAA GTTGTACAGT ATGCGCGAGA GCCGGAAGTG CTCCCGGGCC ACCTCGGAGA CGGGCACGGA AGTGGTCATG CAGCTCAAAG ATGTCCCTGT CAAATCCCTC AAATATTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_005203219.1 |
CDS | 151..1209 |
Translation | |
Target ORF information:
RefSeq Version | XM_005203162.4 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus platelet activating factor receptor (PTAFR), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_005203162.4 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGACCAGCC TCTACTTCCA GCACATAGAG ATGGAGCCAA ATAATTCCTT TCGTGTGGAC TCAGAGTTCC GATACACCCT CTTCCCAATT TTTTACAGCA TCGTCTTTGT GCTGGGGGTC ATTGCCAACA GCTACGTGCT GTGGGTCTTT GCCCGCTTGT ACCCTTCCAA GAAATTCAAC GAGATAAAGA TCTTCATGGT GAACCTCACC ATGGCTGACC TGCTCTTCTT GGTCACCCTG CCCCTGTGGA TCGTCTACTA CTACAACCAG GGTGACTGGA TTCTTCCCAA ATTCCTGTGC AACCTGGCTG GCTGCTTCTT CTTCATTAAC ACCTACTGCT CAGTGGCCTT CCTGGCTGTC ATCACTTACA ACCGCTTCCA GGCAGTGACA AGGCCCATCA AGACTGCTCA GGCTACCACC CGAAAGCGTG GCATCCTTCT GTCCCTGATT ATCTGGGTGT CCATTGTGGG CGCAGCATCC TACTTCTTCG TCCTGGACTC GACCAACAGG GAGCCCAACA AGACTGGCTC AGCCAACATC ACACGCTGCT TTGAACATTA CGAGAAGGGC AGCATCCCGG TCCTCACCAT CCACATCTTC CTGGTGTTCA GCTTCTTCCT CGTCTTCCTC ATCATCCTCT TTTGCAACTT GGTCATCATC CGCACGCTGC TCACGCAGCA GGTGCAAATA CAGCGCAACG CCGAGGTCAA GCGCCGGGCG CTCTGGATGG TCTGCACTGT CCTGGCTGTG TTCATCATCT GTTTCGTGCC CCACCACCTC GTGCAGCTGC CCTGGACCCT GGCCGAGCTG GGCTTCCAGG ACACCGACTT CCACCAGGCG ATTAACGATG CACATCAGGT CACTCTCTGC CTCCTTAGTA CCAACTGTGT CTTAGACCCC ATTATCTACT GTTTCCTCAC CAAGAAGTTC CGCAAGCACC TCACCGAGAA GTTGTACAGT ATGCGCGAGA GCCGGAAGTG CTCCCGGGCC ACCTCGGAGA CGGGCACGGA AGTGGTCATG CAGCTCAAAG ATGTCCCTGT CAAATCCCTC AAATATTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa16951 |
Clone ID Related Accession (Same CDS sequence) |
XM_005203162.3
, XM_005203162.4
, XM_005203163.4
, XM_025001649.1
, XM_025001655.1
, XM_015460325.1
, XM_005203163.3
, XM_025001641.1
|
Accession Version |
XM_005203163.4 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1059bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-06 |
Organism |
Bos taurus(cattle) |
Product |
platelet-activating factor receptor isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037329.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On May 7, 2018 this sequence version replaced XM_005203163.3.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Bos taurus Annotation Release 106
Annotation Version :: 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGACCAGCC TCTACTTCCA GCACATAGAG ATGGAGCCAA ATAATTCCTT TCGTGTGGAC TCAGAGTTCC GATACACCCT CTTCCCAATT TTTTACAGCA TCGTCTTTGT GCTGGGGGTC ATTGCCAACA GCTACGTGCT GTGGGTCTTT GCCCGCTTGT ACCCTTCCAA GAAATTCAAC GAGATAAAGA TCTTCATGGT GAACCTCACC ATGGCTGACC TGCTCTTCTT GGTCACCCTG CCCCTGTGGA TCGTCTACTA CTACAACCAG GGTGACTGGA TTCTTCCCAA ATTCCTGTGC AACCTGGCTG GCTGCTTCTT CTTCATTAAC ACCTACTGCT CAGTGGCCTT CCTGGCTGTC ATCACTTACA ACCGCTTCCA GGCAGTGACA AGGCCCATCA AGACTGCTCA GGCTACCACC CGAAAGCGTG GCATCCTTCT GTCCCTGATT ATCTGGGTGT CCATTGTGGG CGCAGCATCC TACTTCTTCG TCCTGGACTC GACCAACAGG GAGCCCAACA AGACTGGCTC AGCCAACATC ACACGCTGCT TTGAACATTA CGAGAAGGGC AGCATCCCGG TCCTCACCAT CCACATCTTC CTGGTGTTCA GCTTCTTCCT CGTCTTCCTC ATCATCCTCT TTTGCAACTT GGTCATCATC CGCACGCTGC TCACGCAGCA GGTGCAAATA CAGCGCAACG CCGAGGTCAA GCGCCGGGCG CTCTGGATGG TCTGCACTGT CCTGGCTGTG TTCATCATCT GTTTCGTGCC CCACCACCTC GTGCAGCTGC CCTGGACCCT GGCCGAGCTG GGCTTCCAGG ACACCGACTT CCACCAGGCG ATTAACGATG CACATCAGGT CACTCTCTGC CTCCTTAGTA CCAACTGTGT CTTAGACCCC ATTATCTACT GTTTCCTCAC CAAGAAGTTC CGCAAGCACC TCACCGAGAA GTTGTACAGT ATGCGCGAGA GCCGGAAGTG CTCCCGGGCC ACCTCGGAGA CGGGCACGGA AGTGGTCATG CAGCTCAAAG ATGTCCCTGT CAAATCCCTC AAATATTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_005203220.1 |
CDS | 75..1133 |
Translation | |
Target ORF information:
RefSeq Version | XM_005203163.4 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus platelet activating factor receptor (PTAFR), transcript variant X2, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_005203163.4 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGACCAGCC TCTACTTCCA GCACATAGAG ATGGAGCCAA ATAATTCCTT TCGTGTGGAC TCAGAGTTCC GATACACCCT CTTCCCAATT TTTTACAGCA TCGTCTTTGT GCTGGGGGTC ATTGCCAACA GCTACGTGCT GTGGGTCTTT GCCCGCTTGT ACCCTTCCAA GAAATTCAAC GAGATAAAGA TCTTCATGGT GAACCTCACC ATGGCTGACC TGCTCTTCTT GGTCACCCTG CCCCTGTGGA TCGTCTACTA CTACAACCAG GGTGACTGGA TTCTTCCCAA ATTCCTGTGC AACCTGGCTG GCTGCTTCTT CTTCATTAAC ACCTACTGCT CAGTGGCCTT CCTGGCTGTC ATCACTTACA ACCGCTTCCA GGCAGTGACA AGGCCCATCA AGACTGCTCA GGCTACCACC CGAAAGCGTG GCATCCTTCT GTCCCTGATT ATCTGGGTGT CCATTGTGGG CGCAGCATCC TACTTCTTCG TCCTGGACTC GACCAACAGG GAGCCCAACA AGACTGGCTC AGCCAACATC ACACGCTGCT TTGAACATTA CGAGAAGGGC AGCATCCCGG TCCTCACCAT CCACATCTTC CTGGTGTTCA GCTTCTTCCT CGTCTTCCTC ATCATCCTCT TTTGCAACTT GGTCATCATC CGCACGCTGC TCACGCAGCA GGTGCAAATA CAGCGCAACG CCGAGGTCAA GCGCCGGGCG CTCTGGATGG TCTGCACTGT CCTGGCTGTG TTCATCATCT GTTTCGTGCC CCACCACCTC GTGCAGCTGC CCTGGACCCT GGCCGAGCTG GGCTTCCAGG ACACCGACTT CCACCAGGCG ATTAACGATG CACATCAGGT CACTCTCTGC CTCCTTAGTA CCAACTGTGT CTTAGACCCC ATTATCTACT GTTTCCTCAC CAAGAAGTTC CGCAAGCACC TCACCGAGAA GTTGTACAGT ATGCGCGAGA GCCGGAAGTG CTCCCGGGCC ACCTCGGAGA CGGGCACGGA AGTGGTCATG CAGCTCAAAG ATGTCCCTGT CAAATCCCTC AAATATTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa16951 |
Clone ID Related Accession (Same CDS sequence) |
XM_005203162.3
, XM_005203162.4
, XM_005203163.4
, XM_025001649.1
, XM_025001655.1
, XM_015460325.1
, XM_005203163.3
, XM_025001641.1
|
Accession Version |
XM_025001649.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1059bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-06 |
Organism |
Bos taurus(cattle) |
Product |
platelet-activating factor receptor isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037329.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Bos taurus Annotation Release 106
Annotation Version :: 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGACCAGCC TCTACTTCCA GCACATAGAG ATGGAGCCAA ATAATTCCTT TCGTGTGGAC TCAGAGTTCC GATACACCCT CTTCCCAATT TTTTACAGCA TCGTCTTTGT GCTGGGGGTC ATTGCCAACA GCTACGTGCT GTGGGTCTTT GCCCGCTTGT ACCCTTCCAA GAAATTCAAC GAGATAAAGA TCTTCATGGT GAACCTCACC ATGGCTGACC TGCTCTTCTT GGTCACCCTG CCCCTGTGGA TCGTCTACTA CTACAACCAG GGTGACTGGA TTCTTCCCAA ATTCCTGTGC AACCTGGCTG GCTGCTTCTT CTTCATTAAC ACCTACTGCT CAGTGGCCTT CCTGGCTGTC ATCACTTACA ACCGCTTCCA GGCAGTGACA AGGCCCATCA AGACTGCTCA GGCTACCACC CGAAAGCGTG GCATCCTTCT GTCCCTGATT ATCTGGGTGT CCATTGTGGG CGCAGCATCC TACTTCTTCG TCCTGGACTC GACCAACAGG GAGCCCAACA AGACTGGCTC AGCCAACATC ACACGCTGCT TTGAACATTA CGAGAAGGGC AGCATCCCGG TCCTCACCAT CCACATCTTC CTGGTGTTCA GCTTCTTCCT CGTCTTCCTC ATCATCCTCT TTTGCAACTT GGTCATCATC CGCACGCTGC TCACGCAGCA GGTGCAAATA CAGCGCAACG CCGAGGTCAA GCGCCGGGCG CTCTGGATGG TCTGCACTGT CCTGGCTGTG TTCATCATCT GTTTCGTGCC CCACCACCTC GTGCAGCTGC CCTGGACCCT GGCCGAGCTG GGCTTCCAGG ACACCGACTT CCACCAGGCG ATTAACGATG CACATCAGGT CACTCTCTGC CTCCTTAGTA CCAACTGTGT CTTAGACCCC ATTATCTACT GTTTCCTCAC CAAGAAGTTC CGCAAGCACC TCACCGAGAA GTTGTACAGT ATGCGCGAGA GCCGGAAGTG CTCCCGGGCC ACCTCGGAGA CGGGCACGGA AGTGGTCATG CAGCTCAAAG ATGTCCCTGT CAAATCCCTC AAATATTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_024857417.1 |
CDS | 36..1094 |
Translation | |
Target ORF information:
RefSeq Version | XM_025001649.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus platelet activating factor receptor (PTAFR), transcript variant X4, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_025001649.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGACCAGCC TCTACTTCCA GCACATAGAG ATGGAGCCAA ATAATTCCTT TCGTGTGGAC TCAGAGTTCC GATACACCCT CTTCCCAATT TTTTACAGCA TCGTCTTTGT GCTGGGGGTC ATTGCCAACA GCTACGTGCT GTGGGTCTTT GCCCGCTTGT ACCCTTCCAA GAAATTCAAC GAGATAAAGA TCTTCATGGT GAACCTCACC ATGGCTGACC TGCTCTTCTT GGTCACCCTG CCCCTGTGGA TCGTCTACTA CTACAACCAG GGTGACTGGA TTCTTCCCAA ATTCCTGTGC AACCTGGCTG GCTGCTTCTT CTTCATTAAC ACCTACTGCT CAGTGGCCTT CCTGGCTGTC ATCACTTACA ACCGCTTCCA GGCAGTGACA AGGCCCATCA AGACTGCTCA GGCTACCACC CGAAAGCGTG GCATCCTTCT GTCCCTGATT ATCTGGGTGT CCATTGTGGG CGCAGCATCC TACTTCTTCG TCCTGGACTC GACCAACAGG GAGCCCAACA AGACTGGCTC AGCCAACATC ACACGCTGCT TTGAACATTA CGAGAAGGGC AGCATCCCGG TCCTCACCAT CCACATCTTC CTGGTGTTCA GCTTCTTCCT CGTCTTCCTC ATCATCCTCT TTTGCAACTT GGTCATCATC CGCACGCTGC TCACGCAGCA GGTGCAAATA CAGCGCAACG CCGAGGTCAA GCGCCGGGCG CTCTGGATGG TCTGCACTGT CCTGGCTGTG TTCATCATCT GTTTCGTGCC CCACCACCTC GTGCAGCTGC CCTGGACCCT GGCCGAGCTG GGCTTCCAGG ACACCGACTT CCACCAGGCG ATTAACGATG CACATCAGGT CACTCTCTGC CTCCTTAGTA CCAACTGTGT CTTAGACCCC ATTATCTACT GTTTCCTCAC CAAGAAGTTC CGCAAGCACC TCACCGAGAA GTTGTACAGT ATGCGCGAGA GCCGGAAGTG CTCCCGGGCC ACCTCGGAGA CGGGCACGGA AGTGGTCATG CAGCTCAAAG ATGTCCCTGT CAAATCCCTC AAATATTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa16951 |
Clone ID Related Accession (Same CDS sequence) |
XM_005203162.3
, XM_005203162.4
, XM_005203163.4
, XM_025001649.1
, XM_025001655.1
, XM_015460325.1
, XM_005203163.3
, XM_025001641.1
|
Accession Version |
XM_025001655.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1059bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-06 |
Organism |
Bos taurus(cattle) |
Product |
platelet-activating factor receptor isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037329.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Bos taurus Annotation Release 106
Annotation Version :: 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGACCAGCC TCTACTTCCA GCACATAGAG ATGGAGCCAA ATAATTCCTT TCGTGTGGAC TCAGAGTTCC GATACACCCT CTTCCCAATT TTTTACAGCA TCGTCTTTGT GCTGGGGGTC ATTGCCAACA GCTACGTGCT GTGGGTCTTT GCCCGCTTGT ACCCTTCCAA GAAATTCAAC GAGATAAAGA TCTTCATGGT GAACCTCACC ATGGCTGACC TGCTCTTCTT GGTCACCCTG CCCCTGTGGA TCGTCTACTA CTACAACCAG GGTGACTGGA TTCTTCCCAA ATTCCTGTGC AACCTGGCTG GCTGCTTCTT CTTCATTAAC ACCTACTGCT CAGTGGCCTT CCTGGCTGTC ATCACTTACA ACCGCTTCCA GGCAGTGACA AGGCCCATCA AGACTGCTCA GGCTACCACC CGAAAGCGTG GCATCCTTCT GTCCCTGATT ATCTGGGTGT CCATTGTGGG CGCAGCATCC TACTTCTTCG TCCTGGACTC GACCAACAGG GAGCCCAACA AGACTGGCTC AGCCAACATC ACACGCTGCT TTGAACATTA CGAGAAGGGC AGCATCCCGG TCCTCACCAT CCACATCTTC CTGGTGTTCA GCTTCTTCCT CGTCTTCCTC ATCATCCTCT TTTGCAACTT GGTCATCATC CGCACGCTGC TCACGCAGCA GGTGCAAATA CAGCGCAACG CCGAGGTCAA GCGCCGGGCG CTCTGGATGG TCTGCACTGT CCTGGCTGTG TTCATCATCT GTTTCGTGCC CCACCACCTC GTGCAGCTGC CCTGGACCCT GGCCGAGCTG GGCTTCCAGG ACACCGACTT CCACCAGGCG ATTAACGATG CACATCAGGT CACTCTCTGC CTCCTTAGTA CCAACTGTGT CTTAGACCCC ATTATCTACT GTTTCCTCAC CAAGAAGTTC CGCAAGCACC TCACCGAGAA GTTGTACAGT ATGCGCGAGA GCCGGAAGTG CTCCCGGGCC ACCTCGGAGA CGGGCACGGA AGTGGTCATG CAGCTCAAAG ATGTCCCTGT CAAATCCCTC AAATATTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_024857423.1 |
CDS | 146..1204 |
Translation | |
Target ORF information:
RefSeq Version | XM_025001655.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus platelet activating factor receptor (PTAFR), transcript variant X5, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_025001655.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGACCAGCC TCTACTTCCA GCACATAGAG ATGGAGCCAA ATAATTCCTT TCGTGTGGAC TCAGAGTTCC GATACACCCT CTTCCCAATT TTTTACAGCA TCGTCTTTGT GCTGGGGGTC ATTGCCAACA GCTACGTGCT GTGGGTCTTT GCCCGCTTGT ACCCTTCCAA GAAATTCAAC GAGATAAAGA TCTTCATGGT GAACCTCACC ATGGCTGACC TGCTCTTCTT GGTCACCCTG CCCCTGTGGA TCGTCTACTA CTACAACCAG GGTGACTGGA TTCTTCCCAA ATTCCTGTGC AACCTGGCTG GCTGCTTCTT CTTCATTAAC ACCTACTGCT CAGTGGCCTT CCTGGCTGTC ATCACTTACA ACCGCTTCCA GGCAGTGACA AGGCCCATCA AGACTGCTCA GGCTACCACC CGAAAGCGTG GCATCCTTCT GTCCCTGATT ATCTGGGTGT CCATTGTGGG CGCAGCATCC TACTTCTTCG TCCTGGACTC GACCAACAGG GAGCCCAACA AGACTGGCTC AGCCAACATC ACACGCTGCT TTGAACATTA CGAGAAGGGC AGCATCCCGG TCCTCACCAT CCACATCTTC CTGGTGTTCA GCTTCTTCCT CGTCTTCCTC ATCATCCTCT TTTGCAACTT GGTCATCATC CGCACGCTGC TCACGCAGCA GGTGCAAATA CAGCGCAACG CCGAGGTCAA GCGCCGGGCG CTCTGGATGG TCTGCACTGT CCTGGCTGTG TTCATCATCT GTTTCGTGCC CCACCACCTC GTGCAGCTGC CCTGGACCCT GGCCGAGCTG GGCTTCCAGG ACACCGACTT CCACCAGGCG ATTAACGATG CACATCAGGT CACTCTCTGC CTCCTTAGTA CCAACTGTGT CTTAGACCCC ATTATCTACT GTTTCCTCAC CAAGAAGTTC CGCAAGCACC TCACCGAGAA GTTGTACAGT ATGCGCGAGA GCCGGAAGTG CTCCCGGGCC ACCTCGGAGA CGGGCACGGA AGTGGTCATG CAGCTCAAAG ATGTCCCTGT CAAATCCCTC AAATATTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa16951 |
Clone ID Related Accession (Same CDS sequence) |
XM_005203162.3
, XM_005203162.4
, XM_005203163.4
, XM_025001649.1
, XM_025001655.1
, XM_015460325.1
, XM_005203163.3
, XM_025001641.1
|
Accession Version |
XM_015460325.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1059bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-01-25 |
Organism |
Bos taurus(cattle) |
Product |
platelet-activating factor receptor isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003103851.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Bos taurus Annotation Release 105
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 6.5
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGACCAGCC TCTACTTCCA GCACATAGAG ATGGAGCCAA ATAATTCCTT TCGTGTGGAC TCAGAGTTCC GATACACCCT CTTCCCAATT TTTTACAGCA TCGTCTTTGT GCTGGGGGTC ATTGCCAACA GCTACGTGCT GTGGGTCTTT GCCCGCTTGT ACCCTTCCAA GAAATTCAAC GAGATAAAGA TCTTCATGGT GAACCTCACC ATGGCTGACC TGCTCTTCTT GGTCACCCTG CCCCTGTGGA TCGTCTACTA CTACAACCAG GGTGACTGGA TTCTTCCCAA ATTCCTGTGC AACCTGGCTG GCTGCTTCTT CTTCATTAAC ACCTACTGCT CAGTGGCCTT CCTGGCTGTC ATCACTTACA ACCGCTTCCA GGCAGTGACA AGGCCCATCA AGACTGCTCA GGCTACCACC CGAAAGCGTG GCATCCTTCT GTCCCTGATT ATCTGGGTGT CCATTGTGGG CGCAGCATCC TACTTCTTCG TCCTGGACTC GACCAACAGG GAGCCCAACA AGACTGGCTC AGCCAACATC ACACGCTGCT TTGAACATTA CGAGAAGGGC AGCATCCCGG TCCTCACCAT CCACATCTTC CTGGTGTTCA GCTTCTTCCT CGTCTTCCTC ATCATCCTCT TTTGCAACTT GGTCATCATC CGCACGCTGC TCACGCAGCA GGTGCAAATA CAGCGCAACG CCGAGGTCAA GCGCCGGGCG CTCTGGATGG TCTGCACTGT CCTGGCTGTG TTCATCATCT GTTTCGTGCC CCACCACCTC GTGCAGCTGC CCTGGACCCT GGCCGAGCTG GGCTTCCAGG ACACCGACTT CCACCAGGCG ATTAACGATG CACATCAGGT CACTCTCTGC CTCCTTAGTA CCAACTGTGT CTTAGACCCC ATTATCTACT GTTTCCTCAC CAAGAAGTTC CGCAAGCACC TCACCGAGAA GTTGTACAGT ATGCGCGAGA GCCGGAAGTG CTCCCGGGCC ACCTCGGAGA CGGGCACGGA AGTGGTCATG CAGCTCAAAG ATGTCCCTGT CAAATCCCTC AAATATTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_015315811.1 |
CDS | 816..1874 |
Translation | |
Target ORF information:
RefSeq Version | XM_015460325.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus platelet-activating factor receptor (PTAFR), transcript variant X2, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_015460325.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGACCAGCC TCTACTTCCA GCACATAGAG ATGGAGCCAA ATAATTCCTT TCGTGTGGAC TCAGAGTTCC GATACACCCT CTTCCCAATT TTTTACAGCA TCGTCTTTGT GCTGGGGGTC ATTGCCAACA GCTACGTGCT GTGGGTCTTT GCCCGCTTGT ACCCTTCCAA GAAATTCAAC GAGATAAAGA TCTTCATGGT GAACCTCACC ATGGCTGACC TGCTCTTCTT GGTCACCCTG CCCCTGTGGA TCGTCTACTA CTACAACCAG GGTGACTGGA TTCTTCCCAA ATTCCTGTGC AACCTGGCTG GCTGCTTCTT CTTCATTAAC ACCTACTGCT CAGTGGCCTT CCTGGCTGTC ATCACTTACA ACCGCTTCCA GGCAGTGACA AGGCCCATCA AGACTGCTCA GGCTACCACC CGAAAGCGTG GCATCCTTCT GTCCCTGATT ATCTGGGTGT CCATTGTGGG CGCAGCATCC TACTTCTTCG TCCTGGACTC GACCAACAGG GAGCCCAACA AGACTGGCTC AGCCAACATC ACACGCTGCT TTGAACATTA CGAGAAGGGC AGCATCCCGG TCCTCACCAT CCACATCTTC CTGGTGTTCA GCTTCTTCCT CGTCTTCCTC ATCATCCTCT TTTGCAACTT GGTCATCATC CGCACGCTGC TCACGCAGCA GGTGCAAATA CAGCGCAACG CCGAGGTCAA GCGCCGGGCG CTCTGGATGG TCTGCACTGT CCTGGCTGTG TTCATCATCT GTTTCGTGCC CCACCACCTC GTGCAGCTGC CCTGGACCCT GGCCGAGCTG GGCTTCCAGG ACACCGACTT CCACCAGGCG ATTAACGATG CACATCAGGT CACTCTCTGC CTCCTTAGTA CCAACTGTGT CTTAGACCCC ATTATCTACT GTTTCCTCAC CAAGAAGTTC CGCAAGCACC TCACCGAGAA GTTGTACAGT ATGCGCGAGA GCCGGAAGTG CTCCCGGGCC ACCTCGGAGA CGGGCACGGA AGTGGTCATG CAGCTCAAAG ATGTCCCTGT CAAATCCCTC AAATATTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa16951 |
Clone ID Related Accession (Same CDS sequence) |
XM_005203162.3
, XM_005203162.4
, XM_005203163.4
, XM_025001649.1
, XM_025001655.1
, XM_015460325.1
, XM_005203163.3
, XM_025001641.1
|
Accession Version |
XM_005203163.3 |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1059bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-01-25 |
Organism |
Bos taurus(cattle) |
Product |
platelet-activating factor receptor isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003103851.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jan 26, 2016 this sequence version replaced XM_005203163.2.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Bos taurus Annotation Release 105
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 6.5
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGACCAGCC TCTACTTCCA GCACATAGAG ATGGAGCCAA ATAATTCCTT TCGTGTGGAC TCAGAGTTCC GATACACCCT CTTCCCAATT TTTTACAGCA TCGTCTTTGT GCTGGGGGTC ATTGCCAACA GCTACGTGCT GTGGGTCTTT GCCCGCTTGT ACCCTTCCAA GAAATTCAAC GAGATAAAGA TCTTCATGGT GAACCTCACC ATGGCTGACC TGCTCTTCTT GGTCACCCTG CCCCTGTGGA TCGTCTACTA CTACAACCAG GGTGACTGGA TTCTTCCCAA ATTCCTGTGC AACCTGGCTG GCTGCTTCTT CTTCATTAAC ACCTACTGCT CAGTGGCCTT CCTGGCTGTC ATCACTTACA ACCGCTTCCA GGCAGTGACA AGGCCCATCA AGACTGCTCA GGCTACCACC CGAAAGCGTG GCATCCTTCT GTCCCTGATT ATCTGGGTGT CCATTGTGGG CGCAGCATCC TACTTCTTCG TCCTGGACTC GACCAACAGG GAGCCCAACA AGACTGGCTC AGCCAACATC ACACGCTGCT TTGAACATTA CGAGAAGGGC AGCATCCCGG TCCTCACCAT CCACATCTTC CTGGTGTTCA GCTTCTTCCT CGTCTTCCTC ATCATCCTCT TTTGCAACTT GGTCATCATC CGCACGCTGC TCACGCAGCA GGTGCAAATA CAGCGCAACG CCGAGGTCAA GCGCCGGGCG CTCTGGATGG TCTGCACTGT CCTGGCTGTG TTCATCATCT GTTTCGTGCC CCACCACCTC GTGCAGCTGC CCTGGACCCT GGCCGAGCTG GGCTTCCAGG ACACCGACTT CCACCAGGCG ATTAACGATG CACATCAGGT CACTCTCTGC CTCCTTAGTA CCAACTGTGT CTTAGACCCC ATTATCTACT GTTTCCTCAC CAAGAAGTTC CGCAAGCACC TCACCGAGAA GTTGTACAGT ATGCGCGAGA GCCGGAAGTG CTCCCGGGCC ACCTCGGAGA CGGGCACGGA AGTGGTCATG CAGCTCAAAG ATGTCCCTGT CAAATCCCTC AAATATTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_005203220.1 |
CDS | 40..1098 |
Translation | |
Target ORF information:
RefSeq Version | XM_005203163.3 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus platelet-activating factor receptor (PTAFR), transcript variant X3, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_005203163.3 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGACCAGCC TCTACTTCCA GCACATAGAG ATGGAGCCAA ATAATTCCTT TCGTGTGGAC TCAGAGTTCC GATACACCCT CTTCCCAATT TTTTACAGCA TCGTCTTTGT GCTGGGGGTC ATTGCCAACA GCTACGTGCT GTGGGTCTTT GCCCGCTTGT ACCCTTCCAA GAAATTCAAC GAGATAAAGA TCTTCATGGT GAACCTCACC ATGGCTGACC TGCTCTTCTT GGTCACCCTG CCCCTGTGGA TCGTCTACTA CTACAACCAG GGTGACTGGA TTCTTCCCAA ATTCCTGTGC AACCTGGCTG GCTGCTTCTT CTTCATTAAC ACCTACTGCT CAGTGGCCTT CCTGGCTGTC ATCACTTACA ACCGCTTCCA GGCAGTGACA AGGCCCATCA AGACTGCTCA GGCTACCACC CGAAAGCGTG GCATCCTTCT GTCCCTGATT ATCTGGGTGT CCATTGTGGG CGCAGCATCC TACTTCTTCG TCCTGGACTC GACCAACAGG GAGCCCAACA AGACTGGCTC AGCCAACATC ACACGCTGCT TTGAACATTA CGAGAAGGGC AGCATCCCGG TCCTCACCAT CCACATCTTC CTGGTGTTCA GCTTCTTCCT CGTCTTCCTC ATCATCCTCT TTTGCAACTT GGTCATCATC CGCACGCTGC TCACGCAGCA GGTGCAAATA CAGCGCAACG CCGAGGTCAA GCGCCGGGCG CTCTGGATGG TCTGCACTGT CCTGGCTGTG TTCATCATCT GTTTCGTGCC CCACCACCTC GTGCAGCTGC CCTGGACCCT GGCCGAGCTG GGCTTCCAGG ACACCGACTT CCACCAGGCG ATTAACGATG CACATCAGGT CACTCTCTGC CTCCTTAGTA CCAACTGTGT CTTAGACCCC ATTATCTACT GTTTCCTCAC CAAGAAGTTC CGCAAGCACC TCACCGAGAA GTTGTACAGT ATGCGCGAGA GCCGGAAGTG CTCCCGGGCC ACCTCGGAGA CGGGCACGGA AGTGGTCATG CAGCTCAAAG ATGTCCCTGT CAAATCCCTC AAATATTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa16951 |
Clone ID Related Accession (Same CDS sequence) |
XM_005203162.3
, XM_005203162.4
, XM_005203163.4
, XM_025001649.1
, XM_025001655.1
, XM_015460325.1
, XM_005203163.3
, XM_025001641.1
|
Accession Version |
XM_025001641.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1059bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-06 |
Organism |
Bos taurus(cattle) |
Product |
platelet-activating factor receptor isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037329.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Bos taurus Annotation Release 106
Annotation Version :: 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGACCAGCC TCTACTTCCA GCACATAGAG ATGGAGCCAA ATAATTCCTT TCGTGTGGAC TCAGAGTTCC GATACACCCT CTTCCCAATT TTTTACAGCA TCGTCTTTGT GCTGGGGGTC ATTGCCAACA GCTACGTGCT GTGGGTCTTT GCCCGCTTGT ACCCTTCCAA GAAATTCAAC GAGATAAAGA TCTTCATGGT GAACCTCACC ATGGCTGACC TGCTCTTCTT GGTCACCCTG CCCCTGTGGA TCGTCTACTA CTACAACCAG GGTGACTGGA TTCTTCCCAA ATTCCTGTGC AACCTGGCTG GCTGCTTCTT CTTCATTAAC ACCTACTGCT CAGTGGCCTT CCTGGCTGTC ATCACTTACA ACCGCTTCCA GGCAGTGACA AGGCCCATCA AGACTGCTCA GGCTACCACC CGAAAGCGTG GCATCCTTCT GTCCCTGATT ATCTGGGTGT CCATTGTGGG CGCAGCATCC TACTTCTTCG TCCTGGACTC GACCAACAGG GAGCCCAACA AGACTGGCTC AGCCAACATC ACACGCTGCT TTGAACATTA CGAGAAGGGC AGCATCCCGG TCCTCACCAT CCACATCTTC CTGGTGTTCA GCTTCTTCCT CGTCTTCCTC ATCATCCTCT TTTGCAACTT GGTCATCATC CGCACGCTGC TCACGCAGCA GGTGCAAATA CAGCGCAACG CCGAGGTCAA GCGCCGGGCG CTCTGGATGG TCTGCACTGT CCTGGCTGTG TTCATCATCT GTTTCGTGCC CCACCACCTC GTGCAGCTGC CCTGGACCCT GGCCGAGCTG GGCTTCCAGG ACACCGACTT CCACCAGGCG ATTAACGATG CACATCAGGT CACTCTCTGC CTCCTTAGTA CCAACTGTGT CTTAGACCCC ATTATCTACT GTTTCCTCAC CAAGAAGTTC CGCAAGCACC TCACCGAGAA GTTGTACAGT ATGCGCGAGA GCCGGAAGTG CTCCCGGGCC ACCTCGGAGA CGGGCACGGA AGTGGTCATG CAGCTCAAAG ATGTCCCTGT CAAATCCCTC AAATATTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_024857409.1 |
CDS | 161..1219 |
Translation | |
Target ORF information:
RefSeq Version | XM_025001641.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus platelet activating factor receptor (PTAFR), transcript variant X3, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_025001641.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGACCAGCC TCTACTTCCA GCACATAGAG ATGGAGCCAA ATAATTCCTT TCGTGTGGAC TCAGAGTTCC GATACACCCT CTTCCCAATT TTTTACAGCA TCGTCTTTGT GCTGGGGGTC ATTGCCAACA GCTACGTGCT GTGGGTCTTT GCCCGCTTGT ACCCTTCCAA GAAATTCAAC GAGATAAAGA TCTTCATGGT GAACCTCACC ATGGCTGACC TGCTCTTCTT GGTCACCCTG CCCCTGTGGA TCGTCTACTA CTACAACCAG GGTGACTGGA TTCTTCCCAA ATTCCTGTGC AACCTGGCTG GCTGCTTCTT CTTCATTAAC ACCTACTGCT CAGTGGCCTT CCTGGCTGTC ATCACTTACA ACCGCTTCCA GGCAGTGACA AGGCCCATCA AGACTGCTCA GGCTACCACC CGAAAGCGTG GCATCCTTCT GTCCCTGATT ATCTGGGTGT CCATTGTGGG CGCAGCATCC TACTTCTTCG TCCTGGACTC GACCAACAGG GAGCCCAACA AGACTGGCTC AGCCAACATC ACACGCTGCT TTGAACATTA CGAGAAGGGC AGCATCCCGG TCCTCACCAT CCACATCTTC CTGGTGTTCA GCTTCTTCCT CGTCTTCCTC ATCATCCTCT TTTGCAACTT GGTCATCATC CGCACGCTGC TCACGCAGCA GGTGCAAATA CAGCGCAACG CCGAGGTCAA GCGCCGGGCG CTCTGGATGG TCTGCACTGT CCTGGCTGTG TTCATCATCT GTTTCGTGCC CCACCACCTC GTGCAGCTGC CCTGGACCCT GGCCGAGCTG GGCTTCCAGG ACACCGACTT CCACCAGGCG ATTAACGATG CACATCAGGT CACTCTCTGC CTCCTTAGTA CCAACTGTGT CTTAGACCCC ATTATCTACT GTTTCCTCAC CAAGAAGTTC CGCAAGCACC TCACCGAGAA GTTGTACAGT ATGCGCGAGA GCCGGAAGTG CTCCCGGGCC ACCTCGGAGA CGGGCACGGA AGTGGTCATG CAGCTCAAAG ATGTCCCTGT CAAATCCCTC AAATATTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
A whole-genome assembly of the domestic cow, Bos taurus.
Genome biology10(4)R42(2009)
Zimin AV,Delcher AL,Florea L,Kelley DR,Schatz MC,Puiu D,Hanrahan F,Pertea G,Van Tassell CP,Sonstegard TS,Mar?ais G,Roberts M,Subramanian P,Yorke JA,Salzberg SL |