Gene Symbol |
OSTM1 |
Entrez Gene ID |
518522 |
Full Name |
osteopetrosis associated transmembrane protein 1 |
General protein information |
- Preferred Names
osteopetrosis associated transmembrane protein 1
Names
osteopetrosis-associated transmembrane protein 1
|
Gene Type |
protein-coding |
Organism |
Bos taurus(cattle) |
mRNA and Protein(s)
mRNA |
Protein |
Name |
XM_015472807.2 |
XP_015328293.1 |
osteopetrosis-associated transmembrane protein 1 isoform X3 |
XM_024996600.1 |
XP_024852368.1 |
osteopetrosis-associated transmembrane protein 1 isoform X2 |
XM_015472807.1 |
XP_015328293.1 |
osteopetrosis-associated transmembrane protein 1 isoform X1 |
NM_001075776.1 |
NP_001069244.1 |
osteopetrosis-associated transmembrane protein 1 |
XM_024996599.1 |
XP_024852367.1 |
osteopetrosis-associated transmembrane protein 1 isoform X1 |
Xenopus tropicalis (tropical clawed frog) |
ostm1 |
NP_001072582.1 |
Pan troglodytes (chimpanzee) |
OSTM1 |
XP_001148469.1 |
|
OSTM1 |
XP_001094902.1 |
Canis lupus familiaris (dog) |
OSTM1 |
XP_854990.3 |
Gallus gallus (chicken) |
OSTM1 |
NP_001026248.1 |
Homo sapiens (human) |
OSTM1 |
NP_054747.2 |
Mus musculus (house mouse) |
Ostm1 |
NP_766004.1 |
Rattus norvegicus (Norway rat) |
Ostm1 |
NP_001025096.1 |
Bos taurus (cattle) |
OSTM1 |
NP_001069244.1 |
Danio rerio (zebrafish) |
ostm1 |
XP_002665788.2 |
Related articles in PubMed
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following OSTM1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the OSTM1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
OBa37916 |
Clone ID Related Accession (Same CDS sequence) |
NM_001075776.1
|
Accession Version |
NM_001075776.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1005bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-10-23 |
Organism |
Bos taurus(cattle) |
Product |
osteopetrosis-associated transmembrane protein 1 |
Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC120014.1. On Oct 4, 2006 this sequence version replaced XM_596715.2.
##Evidence-Data-START##
Transcript exon combination :: BC120014.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN03145413, SAMN03145414 [ECO:0000348]
##Evidence-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961
| ATGGACCCGA ACCGGACCAT CGAGCGGCGG AGGTCATCAT TGCTGCTGCT GCGGCTGCTG TTGGTGGTGC TGCTGTGGTC GGGACTGGCT CTGGGCACCT TCTCCGTGGG CAGCAGCCCC CACAGGGTCC TCCACGACCT CCTGTCGGAG GAGCAGTTGC TGGAGGTGGA AGACTTGTCC CTGGCTCTGC TGCAGGGCGG AAGGATGGGG CCACTGTCAC TCCCCCCAGA TTTGCCGGAT CTGGATCCAG AGTGCCGGGA GCTGCTGCTG GACTTCGCCA ACAGCAGTGC TGAGCTGACC GGGTGTCTAG TGCGCGGCGC CCGACCGGTG CGCCTCTGTC AGACCTGCTA CCCACTCTTC CAACAGGTCG CCAACAAGAT GGACAACATC AGCCGAGCCG TGGGGAATTC TTCAGAGAGT CATAGTTGTG CCAGAAGCCT TTTAATGGCA GATAGAATGC AAATAGTTGT GATTCTGTCT GAGTTTTTTA ATTCCACATG GCAGAAGGCA AATTGTGCAA ATTGTTTAAC GAACAAAAGT GAAGAATTAT CAAATAGCAC AGTATACTTC CTCAACCAAT TTAATCACAC CTTGACCTGC TTTGAGAATA ACCTTCAGGG GAGCACACAC AGTCTTCAGT TAAGAAATTA TTCGGAAGTA TGCAAAAACT GTCGTGAAGC ATATACAACT CTGAGTAGTC TGTACGGTGA AATGCAAAAA ATAAATGAAC GTGAAAGCAA GGCTGAATTT GGAACACATT TGTGCATTGA CGTGGAGGAT GCAATGAATA TTACTCGGAA ACTTTGGAGT CGAACTTTCA ACTGTTCAGT CCTTTGCAGG GACACAGTGC CTGTAATCGC TGTTTCTGTG TTCATTCTCT TTCTACCTGT TGTCTTCTAC CTTAGTAGTT TTCTTCACTC AGAGCAAAAG AAACGCAAAC TCATCCTACC GAAACGTCTC AAGTCCAGTA CAAGCTTTGC AAACATTCAA GAAAATTCCA ATTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001069244.1 |
CDS | 105..1109 |
Translation | |
Target ORF information:
RefSeq Version | NM_001075776.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus osteoclastogenesis associated transmembrane protein 1 (OSTM1), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001075776.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961
| ATGGACCCGA ACCGGACCAT CGAGCGGCGG AGGTCATCAT TGCTGCTGCT GCGGCTGCTG TTGGTGGTGC TGCTGTGGTC GGGACTGGCT CTGGGCACCT TCTCCGTGGG CAGCAGCCCC CACAGGGTCC TCCACGACCT CCTGTCGGAG GAGCAGTTGC TGGAGGTGGA AGACTTGTCC CTGGCTCTGC TGCAGGGCGG AAGGATGGGG CCACTGTCAC TCCCCCCAGA TTTGCCGGAT CTGGATCCAG AGTGCCGGGA GCTGCTGCTG GACTTCGCCA ACAGCAGTGC TGAGCTGACC GGGTGTCTAG TGCGCGGCGC CCGACCGGTG CGCCTCTGTC AGACCTGCTA CCCACTCTTC CAACAGGTCG CCAACAAGAT GGACAACATC AGCCGAGCCG TGGGGAATTC TTCAGAGAGT CATAGTTGTG CCAGAAGCCT TTTAATGGCA GATAGAATGC AAATAGTTGT GATTCTGTCT GAGTTTTTTA ATTCCACATG GCAGAAGGCA AATTGTGCAA ATTGTTTAAC GAACAAAAGT GAAGAATTAT CAAATAGCAC AGTATACTTC CTCAACCAAT TTAATCACAC CTTGACCTGC TTTGAGAATA ACCTTCAGGG GAGCACACAC AGTCTTCAGT TAAGAAATTA TTCGGAAGTA TGCAAAAACT GTCGTGAAGC ATATACAACT CTGAGTAGTC TGTACGGTGA AATGCAAAAA ATAAATGAAC GTGAAAGCAA GGCTGAATTT GGAACACATT TGTGCATTGA CGTGGAGGAT GCAATGAATA TTACTCGGAA ACTTTGGAGT CGAACTTTCA ACTGTTCAGT CCTTTGCAGG GACACAGTGC CTGTAATCGC TGTTTCTGTG TTCATTCTCT TTCTACCTGT TGTCTTCTAC CTTAGTAGTT TTCTTCACTC AGAGCAAAAG AAACGCAAAC TCATCCTACC GAAACGTCTC AAGTCCAGTA CAAGCTTTGC AAACATTCAA GAAAATTCCA ATTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa237756 |
Clone ID Related Accession (Same CDS sequence) |
XM_024996599.1
|
Accession Version |
XM_024996599.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1038bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-06 |
Organism |
Bos taurus(cattle) |
Product |
osteopetrosis-associated transmembrane protein 1 isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037336.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Bos taurus Annotation Release 106
Annotation Version :: 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGGACCCGA ACCGGACCAT CGAGCGGCGG AGGTCATCAT TGCTGCTGCT GCGGCTGCTG TTGGTGGTGC TGCTGTGGTC GGGACTGGCT CTGGGCACCT TCTCCGTGGG CAGCAGCCCC CACAGGGTCC TCCACGACCT CCTGTCGGAG GAGCAGTTGC TGGAGGTGGA AGACTTGTCC CTGGCTCTGC TGCAGGGCGG AAGGATGGGG CCACTGTCAC TCCCCCCAGA TTTGCCGGAT CTGGATCCAG AGTGCCGGGA GCTGCTGCTG GACTTCGCCA ACAGCAGTGC TGAGCTGACC GGGTGTCTAG TGCGCGGCGC CCGACCGGTG CGCCTCTGTC AGACCTGCTA CCCACTCTTC CAACAGGTCG CCAACAAGAT GGACAACATC AGCCGAGCCG TGGGGAATTC TTCAGAGAGT CATAGTTGTG CCAGAAGCCT TTTAATGGCA GATAGAATGC AAATAGTTGT GATTCTGTCT GAGTTTTTTA ATTCCACATG GCAGAAGGCA AATTGTGCAA ATTGTTTAAC GAACAAAAGT GAAGAATTAT CAAATAGCAC AGTATACTTC CTCAACCAAT TTAATCACAC CTTGACCTGC TTTGAGAATA ACCTTCAGCA GTCAGTTAAT GTTATTTCTT CAGGCTCCAA GGGGAGCACA CACAGTCTTC AGTTAAGAAA TTATTCGGAA GTATGCAAAA ACTGTCGTGA AGCATATACA ACTCTGAGTA GTCTGTACGG TGAAATGCAA AAAATAAATG AACGTGAAAG CAAGGCTGAA TTTGGAACAC ATTTGTGCAT TGACGTGGAG GATGCAATGA ATATTACTCG GAAACTTTGG AGTCGAACTT TCAACTGTTC AGTCCTTTGC AGGGACACAG TGCCTGTAAT CGCTGTTTCT GTGTTCATTC TCTTTCTACC TGTTGTCTTC TACCTTAGTA GTTTTCTTCA CTCAGAGCAA AAGAAACGCA AACTCATCCT ACCGAAACGT CTCAAGTCCA GTACAAGCTT TGCAAACATT CAAGAAAATT CCAATTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_024852367.1 |
CDS | 104..1141 |
Translation | |
Target ORF information:
RefSeq Version | XM_024996599.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus osteopetrosis associated transmembrane protein 1 (OSTM1), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_024996599.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGGACCCGA ACCGGACCAT CGAGCGGCGG AGGTCATCAT TGCTGCTGCT GCGGCTGCTG TTGGTGGTGC TGCTGTGGTC GGGACTGGCT CTGGGCACCT TCTCCGTGGG CAGCAGCCCC CACAGGGTCC TCCACGACCT CCTGTCGGAG GAGCAGTTGC TGGAGGTGGA AGACTTGTCC CTGGCTCTGC TGCAGGGCGG AAGGATGGGG CCACTGTCAC TCCCCCCAGA TTTGCCGGAT CTGGATCCAG AGTGCCGGGA GCTGCTGCTG GACTTCGCCA ACAGCAGTGC TGAGCTGACC GGGTGTCTAG TGCGCGGCGC CCGACCGGTG CGCCTCTGTC AGACCTGCTA CCCACTCTTC CAACAGGTCG CCAACAAGAT GGACAACATC AGCCGAGCCG TGGGGAATTC TTCAGAGAGT CATAGTTGTG CCAGAAGCCT TTTAATGGCA GATAGAATGC AAATAGTTGT GATTCTGTCT GAGTTTTTTA ATTCCACATG GCAGAAGGCA AATTGTGCAA ATTGTTTAAC GAACAAAAGT GAAGAATTAT CAAATAGCAC AGTATACTTC CTCAACCAAT TTAATCACAC CTTGACCTGC TTTGAGAATA ACCTTCAGCA GTCAGTTAAT GTTATTTCTT CAGGCTCCAA GGGGAGCACA CACAGTCTTC AGTTAAGAAA TTATTCGGAA GTATGCAAAA ACTGTCGTGA AGCATATACA ACTCTGAGTA GTCTGTACGG TGAAATGCAA AAAATAAATG AACGTGAAAG CAAGGCTGAA TTTGGAACAC ATTTGTGCAT TGACGTGGAG GATGCAATGA ATATTACTCG GAAACTTTGG AGTCGAACTT TCAACTGTTC AGTCCTTTGC AGGGACACAG TGCCTGTAAT CGCTGTTTCT GTGTTCATTC TCTTTCTACC TGTTGTCTTC TACCTTAGTA GTTTTCTTCA CTCAGAGCAA AAGAAACGCA AACTCATCCT ACCGAAACGT CTCAAGTCCA GTACAAGCTT TGCAAACATT CAAGAAAATT CCAATTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa237757 |
Clone ID Related Accession (Same CDS sequence) |
XM_024996600.1
|
Accession Version |
XM_024996600.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1011bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-06 |
Organism |
Bos taurus(cattle) |
Product |
osteopetrosis-associated transmembrane protein 1 isoform X2 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037336.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Bos taurus Annotation Release 106
Annotation Version :: 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961
| ATGGACCCGA ACCGGACCAT CGAGCGGCGG AGGTCATCAT TGCTGCTGCT GCGGCTGCTG TTGGTGGTGC TGCTGTGGTC GGGACTGGCT CTGGGCACCT TCTCCGTGGG CAGCAGCCCC CACAGGGTCC TCCACGACCT CCTGTCGGAG GAGCAGTTGC TGGAGGTGGA AGACTTGTCC CTGGCTCTGC TGCAGGGCGG AAGGATGGGG CCACTGTCAC TCCCCCCAGA TTTGCCGGAT CTGGATCCAG AGTGCCGGGA GCTGCTGCTG GACTTCGCCA ACAGCAGTGC TGAGCTGACC GGGTGTCTAG TGCGCGGCGC CCGACCGGTG CGCCTCTGTC AGACCTGCTA CCCACTCTTC CAACAGGTCG CCAACAAGAT GGACAACATC AGCCGAGCCG TGGGGAATTC TTCAGAGAGT CATAGTTGTG CCAGAAGCCT TTTAATGGCA GATAGAATGC AAATAGTTGT GATTCTGTCT GAGTTTTTTA ATTCCACATG GCAGAAGGCA AATTGTGCAA ATTGTTTAAC GAACAAAAGT GAAGAATTAT CAAATAGCAC AGTATACTTC CTCAACCAAT TTAATCACAC CTTGACCTGC TTTGAGAATA ACCTTCAGCA GTCAGTTAAT GTTATTTCTT CAGGCTCCAA GGGGAGCACA CACAGTCTTC AGTTAAGAAA TTATTCGGAA GTATGCAAAA ACTGTCGTGA AGCATATACA ACTCTGAGTA GTCTGTACGG TGAAATGCAA AAAATAAATG AACGTGAAAG CAAGGCTGAA TTTGGAACAC ATTTGTGCAT TGACGTGGAG GATGCACGAA ACGTCTCAAG TCCAGTACAA GCTTTGCAAA CATTCAAGAA AATTCCAATT GAAACCTACA GAATGGAGAA TCAGCATCTT ATCCCATGGA TGAATGGTGG AAGACACAGC TTGGTCCAAA AGAAGATAAA CTGTGATTTG ACAAGTCAAG TTCTTAAGAA ATGCAAGGAC TTCAGATTTA TTTTTAAATA A |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_024852368.1 |
CDS | 106..1116 |
Translation | |
Target ORF information:
RefSeq Version | XM_024996600.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus osteopetrosis associated transmembrane protein 1 (OSTM1), transcript variant X2, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_024996600.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961
| ATGGACCCGA ACCGGACCAT CGAGCGGCGG AGGTCATCAT TGCTGCTGCT GCGGCTGCTG TTGGTGGTGC TGCTGTGGTC GGGACTGGCT CTGGGCACCT TCTCCGTGGG CAGCAGCCCC CACAGGGTCC TCCACGACCT CCTGTCGGAG GAGCAGTTGC TGGAGGTGGA AGACTTGTCC CTGGCTCTGC TGCAGGGCGG AAGGATGGGG CCACTGTCAC TCCCCCCAGA TTTGCCGGAT CTGGATCCAG AGTGCCGGGA GCTGCTGCTG GACTTCGCCA ACAGCAGTGC TGAGCTGACC GGGTGTCTAG TGCGCGGCGC CCGACCGGTG CGCCTCTGTC AGACCTGCTA CCCACTCTTC CAACAGGTCG CCAACAAGAT GGACAACATC AGCCGAGCCG TGGGGAATTC TTCAGAGAGT CATAGTTGTG CCAGAAGCCT TTTAATGGCA GATAGAATGC AAATAGTTGT GATTCTGTCT GAGTTTTTTA ATTCCACATG GCAGAAGGCA AATTGTGCAA ATTGTTTAAC GAACAAAAGT GAAGAATTAT CAAATAGCAC AGTATACTTC CTCAACCAAT TTAATCACAC CTTGACCTGC TTTGAGAATA ACCTTCAGCA GTCAGTTAAT GTTATTTCTT CAGGCTCCAA GGGGAGCACA CACAGTCTTC AGTTAAGAAA TTATTCGGAA GTATGCAAAA ACTGTCGTGA AGCATATACA ACTCTGAGTA GTCTGTACGG TGAAATGCAA AAAATAAATG AACGTGAAAG CAAGGCTGAA TTTGGAACAC ATTTGTGCAT TGACGTGGAG GATGCACGAA ACGTCTCAAG TCCAGTACAA GCTTTGCAAA CATTCAAGAA AATTCCAATT GAAACCTACA GAATGGAGAA TCAGCATCTT ATCCCATGGA TGAATGGTGG AAGACACAGC TTGGTCCAAA AGAAGATAAA CTGTGATTTG ACAAGTCAAG TTCTTAAGAA ATGCAAGGAC TTCAGATTTA TTTTTAAATA A |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa91453 |
Clone ID Related Accession (Same CDS sequence) |
XM_015472807.2
, XM_015472807.1
|
Accession Version |
XM_015472807.2 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 978bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-06 |
Organism |
Bos taurus(cattle) |
Product |
osteopetrosis-associated transmembrane protein 1 isoform X3 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037336.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On May 7, 2018 this sequence version replaced XM_015472807.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Bos taurus Annotation Release 106
Annotation Version :: 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961
| ATGGACCCGA ACCGGACCAT CGAGCGGCGG AGGTCATCAT TGCTGCTGCT GCGGCTGCTG TTGGTGGTGC TGCTGTGGTC GGGACTGGCT CTGGGCACCT TCTCCGTGGG CAGCAGCCCC CACAGGGTCC TCCACGACCT CCTGTCGGAG GAGCAGTTGC TGGAGGTGGA AGACTTGTCC CTGGCTCTGC TGCAGGGCGG AAGGATGGGG CCACTGTCAC TCCCCCCAGA TTTGCCGGAT CTGGATCCAG AGTGCCGGGA GCTGCTGCTG GACTTCGCCA ACAGCAGTGC TGAGCTGACC GGGTGTCTAG TGCGCGGCGC CCGACCGGTG CGCCTCTGTC AGACCTGCTA CCCACTCTTC CAACAGGTCG CCAACAAGAT GGACAACATC AGCCGAGCCG TGGGGAATTC TTCAGAGAGT CATAGTTGTG CCAGAAGCCT TTTAATGGCA GATAGAATGC AAATAGTTGT GATTCTGTCT GAGTTTTTTA ATTCCACATG GCAGAAGGCA AATTGTGCAA ATTGTTTAAC GAACAAAAGT GAAGAATTAT CAAATAGCAC AGTATACTTC CTCAACCAAT TTAATCACAC CTTGACCTGC TTTGAGAATA ACCTTCAGGG GAGCACACAC AGTCTTCAGT TAAGAAATTA TTCGGAAGTA TGCAAAAACT GTCGTGAAGC ATATACAACT CTGAGTAGTC TGTACGGTGA AATGCAAAAA ATAAATGAAC GTGAAAGCAA GGCTGAATTT GGAACACATT TGTGCATTGA CGTGGAGGAT GCACGAAACG TCTCAAGTCC AGTACAAGCT TTGCAAACAT TCAAGAAAAT TCCAATTGAA ACCTACAGAA TGGAGAATCA GCATCTTATC CCATGGATGA ATGGTGGAAG ACACAGCTTG GTCCAAAAGA AGATAAACTG TGATTTGACA AGTCAAGTTC TTAAGAAATG CAAGGACTTC AGATTTATTT TTAAATAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_015328293.1 |
CDS | 105..1082 |
Translation | |
Target ORF information:
RefSeq Version | XM_015472807.2 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus osteopetrosis associated transmembrane protein 1 (OSTM1), transcript variant X3, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_015472807.2 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961
| ATGGACCCGA ACCGGACCAT CGAGCGGCGG AGGTCATCAT TGCTGCTGCT GCGGCTGCTG TTGGTGGTGC TGCTGTGGTC GGGACTGGCT CTGGGCACCT TCTCCGTGGG CAGCAGCCCC CACAGGGTCC TCCACGACCT CCTGTCGGAG GAGCAGTTGC TGGAGGTGGA AGACTTGTCC CTGGCTCTGC TGCAGGGCGG AAGGATGGGG CCACTGTCAC TCCCCCCAGA TTTGCCGGAT CTGGATCCAG AGTGCCGGGA GCTGCTGCTG GACTTCGCCA ACAGCAGTGC TGAGCTGACC GGGTGTCTAG TGCGCGGCGC CCGACCGGTG CGCCTCTGTC AGACCTGCTA CCCACTCTTC CAACAGGTCG CCAACAAGAT GGACAACATC AGCCGAGCCG TGGGGAATTC TTCAGAGAGT CATAGTTGTG CCAGAAGCCT TTTAATGGCA GATAGAATGC AAATAGTTGT GATTCTGTCT GAGTTTTTTA ATTCCACATG GCAGAAGGCA AATTGTGCAA ATTGTTTAAC GAACAAAAGT GAAGAATTAT CAAATAGCAC AGTATACTTC CTCAACCAAT TTAATCACAC CTTGACCTGC TTTGAGAATA ACCTTCAGGG GAGCACACAC AGTCTTCAGT TAAGAAATTA TTCGGAAGTA TGCAAAAACT GTCGTGAAGC ATATACAACT CTGAGTAGTC TGTACGGTGA AATGCAAAAA ATAAATGAAC GTGAAAGCAA GGCTGAATTT GGAACACATT TGTGCATTGA CGTGGAGGAT GCACGAAACG TCTCAAGTCC AGTACAAGCT TTGCAAACAT TCAAGAAAAT TCCAATTGAA ACCTACAGAA TGGAGAATCA GCATCTTATC CCATGGATGA ATGGTGGAAG ACACAGCTTG GTCCAAAAGA AGATAAACTG TGATTTGACA AGTCAAGTTC TTAAGAAATG CAAGGACTTC AGATTTATTT TTAAATAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa91453 |
Clone ID Related Accession (Same CDS sequence) |
XM_015472807.2
, XM_015472807.1
|
Accession Version |
XM_015472807.1 |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 978bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-01-25 |
Organism |
Bos taurus(cattle) |
Product |
osteopetrosis-associated transmembrane protein 1 isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104190.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Bos taurus Annotation Release 105
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 6.5
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961
| ATGGACCCGA ACCGGACCAT CGAGCGGCGG AGGTCATCAT TGCTGCTGCT GCGGCTGCTG TTGGTGGTGC TGCTGTGGTC GGGACTGGCT CTGGGCACCT TCTCCGTGGG CAGCAGCCCC CACAGGGTCC TCCACGACCT CCTGTCGGAG GAGCAGTTGC TGGAGGTGGA AGACTTGTCC CTGGCTCTGC TGCAGGGCGG AAGGATGGGG CCACTGTCAC TCCCCCCAGA TTTGCCGGAT CTGGATCCAG AGTGCCGGGA GCTGCTGCTG GACTTCGCCA ACAGCAGTGC TGAGCTGACC GGGTGTCTAG TGCGCGGCGC CCGACCGGTG CGCCTCTGTC AGACCTGCTA CCCACTCTTC CAACAGGTCG CCAACAAGAT GGACAACATC AGCCGAGCCG TGGGGAATTC TTCAGAGAGT CATAGTTGTG CCAGAAGCCT TTTAATGGCA GATAGAATGC AAATAGTTGT GATTCTGTCT GAGTTTTTTA ATTCCACATG GCAGAAGGCA AATTGTGCAA ATTGTTTAAC GAACAAAAGT GAAGAATTAT CAAATAGCAC AGTATACTTC CTCAACCAAT TTAATCACAC CTTGACCTGC TTTGAGAATA ACCTTCAGGG GAGCACACAC AGTCTTCAGT TAAGAAATTA TTCGGAAGTA TGCAAAAACT GTCGTGAAGC ATATACAACT CTGAGTAGTC TGTACGGTGA AATGCAAAAA ATAAATGAAC GTGAAAGCAA GGCTGAATTT GGAACACATT TGTGCATTGA CGTGGAGGAT GCACGAAACG TCTCAAGTCC AGTACAAGCT TTGCAAACAT TCAAGAAAAT TCCAATTGAA ACCTACAGAA TGGAGAATCA GCATCTTATC CCATGGATGA ATGGTGGAAG ACACAGCTTG GTCCAAAAGA AGATAAACTG TGATTTGACA AGTCAAGTTC TTAAGAAATG CAAGGACTTC AGATTTATTT TTAAATAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_015328293.1 |
CDS | 104..1081 |
Translation | |
Target ORF information:
RefSeq Version | XM_015472807.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus osteopetrosis associated transmembrane protein 1 (OSTM1), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_015472807.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961
| ATGGACCCGA ACCGGACCAT CGAGCGGCGG AGGTCATCAT TGCTGCTGCT GCGGCTGCTG TTGGTGGTGC TGCTGTGGTC GGGACTGGCT CTGGGCACCT TCTCCGTGGG CAGCAGCCCC CACAGGGTCC TCCACGACCT CCTGTCGGAG GAGCAGTTGC TGGAGGTGGA AGACTTGTCC CTGGCTCTGC TGCAGGGCGG AAGGATGGGG CCACTGTCAC TCCCCCCAGA TTTGCCGGAT CTGGATCCAG AGTGCCGGGA GCTGCTGCTG GACTTCGCCA ACAGCAGTGC TGAGCTGACC GGGTGTCTAG TGCGCGGCGC CCGACCGGTG CGCCTCTGTC AGACCTGCTA CCCACTCTTC CAACAGGTCG CCAACAAGAT GGACAACATC AGCCGAGCCG TGGGGAATTC TTCAGAGAGT CATAGTTGTG CCAGAAGCCT TTTAATGGCA GATAGAATGC AAATAGTTGT GATTCTGTCT GAGTTTTTTA ATTCCACATG GCAGAAGGCA AATTGTGCAA ATTGTTTAAC GAACAAAAGT GAAGAATTAT CAAATAGCAC AGTATACTTC CTCAACCAAT TTAATCACAC CTTGACCTGC TTTGAGAATA ACCTTCAGGG GAGCACACAC AGTCTTCAGT TAAGAAATTA TTCGGAAGTA TGCAAAAACT GTCGTGAAGC ATATACAACT CTGAGTAGTC TGTACGGTGA AATGCAAAAA ATAAATGAAC GTGAAAGCAA GGCTGAATTT GGAACACATT TGTGCATTGA CGTGGAGGAT GCACGAAACG TCTCAAGTCC AGTACAAGCT TTGCAAACAT TCAAGAAAAT TCCAATTGAA ACCTACAGAA TGGAGAATCA GCATCTTATC CCATGGATGA ATGGTGGAAG ACACAGCTTG GTCCAAAAGA AGATAAACTG TGATTTGACA AGTCAAGTTC TTAAGAAATG CAAGGACTTC AGATTTATTT TTAAATAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
A whole-genome assembly of the domestic cow, Bos taurus.
Genome biology10(4)R42(2009)
Zimin AV,Delcher AL,Florea L,Kelley DR,Schatz MC,Puiu D,Hanrahan F,Pertea G,Van Tassell CP,Sonstegard TS,Mar?ais G,Roberts M,Subramanian P,Yorke JA,Salzberg SL |