Gene Symbol |
GPC4 |
Entrez Gene ID |
540179 |
Full Name |
glypican 4 |
General protein information |
- Preferred Names
glypican 4
Names
glypican-4
|
Gene Type |
protein-coding |
Organism |
Bos taurus(cattle) |
Rattus norvegicus (Norway rat) |
Gpc4 |
NP_001014130.1 |
Bos taurus (cattle) |
GPC4 |
NP_001192713.1 |
Mus musculus (house mouse) |
Gpc4 |
NP_032176.2 |
Gallus gallus (chicken) |
GPC4 |
XP_420222.3 |
Danio rerio (zebrafish) |
gpc4 |
NP_571935.2 |
Xenopus tropicalis (tropical clawed frog) |
gpc4 |
XP_002932634.1 |
Canis lupus familiaris (dog) |
GPC4 |
XP_549265.2 |
|
GPC4 |
XP_001097252.1 |
Drosophila melanogaster (fruit fly) |
dlp |
NP_996075.2 |
Caenorhabditis elegans (roundworm) |
gpn-1 |
NP_510582.1 |
Homo sapiens (human) |
GPC4 |
NP_001439.2 |
Pan troglodytes (chimpanzee) |
GPC4 |
XP_529161.3 |
Anopheles gambiae (African malaria mosquito) |
AgaP_AGAP003559 |
XP_313306.5 |
Related articles in PubMed
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following GPC4 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the GPC4 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
OBa39539 |
Clone ID Related Accession (Same CDS sequence) |
NM_001205784.1
|
Accession Version |
NM_001205784.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1671bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-28 |
Organism |
Bos taurus(cattle) |
Product |
glypican-4 precursor |
Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from NKLS02000030.1. On Apr 20, 2011 this sequence version replaced XM_592079.5.
Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments.
##Evidence-Data-START##
Transcript exon combination :: SRR5721697.5334.1, SRR5721697.6353.1 [ECO:0000332]
RNAseq introns :: mixed/partial sample support SAMN03145412, SAMN03145413 [ECO:0000350]
##Evidence-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621
| ATGGCACGGT TCGGCTTGCC CGCGCTGTTC TGCACCCTGG CCGCGCTCAG CGCCGCACTG CTGGCTGCCG AGCCCAAGTC GAAAAGTTGC TCGGAAGTGC GACGTCTCTA CGTGTCCAAA GGCTTCGACA AGAACGATGC CCCCATGCAC GAGATCAACG GTGATCATTT GAAAATCTGT CTCCAGGGTT ATACCTGCTG CTCTCAAGAG ATGGAGGAAA AGTACAGCCT CCAGAGTAAG GAGGATTTCA AAAGTGTGGT CAGTGAACAG TGCAATCATT TACAAGCTGT CTTTGCCTCC CGCTACAAGA AGTTTGATGA ATTCTTCAAA GAACTACTTG AAAATGCGGA AAAGTCCCTG AATGACATGT TTGTGAAGAC ATACGGCCAC TTGTACATGC AGAATTCTGA GCTATTTAAA GATCTCTTCG AAGAGTTGAA GCGCTACTAT GTGGCAGGGA ACGTGAACCT GGAGGAAATG CTGAATGACT TCTGGGCCCG CCTCCTGGAG CGCATGTTTC GCCTGGTGAA CTCCCAGTAC CACTTCACAG ACGAATATCT GGAGTGCGTG AGCAAGTACA CAGAGCAGCT GAAGCCCTTT GGAGATGTCC CTCGGAAACT GAAGCTCCAG GTCACTCGTG CATTTGTGGC AGCCCGCACT TTTGCTCAGG GCTTAGCAGT TGCAAGAGAT GTGGTGAGCA AAGTCTCAGT GGTGAATCCC ACAACCCAGT GTACCCATGC CCTGGTGAAG ATGATGTACT GCTCCCACTG CCAAGGTCTC GTGACTGTGA AACCCTGTTA CAACTATTGC TCCAACATCA TGAGAGGCTG TTTGGCCAAC CAAGGGGATC TTGATCTCGA GTGGAACAAT TTCATAGATG CTATGCTGAT GGTGGCTGAG AGGCTGGAGG GTCCTTTCAA CATTGAGTCC GTCATGGATC CCATCGACGT GAAGATATCA GATGCTATTA TGAACATGCA GGAGAACAGT GTGCAGGTAT CTCAGAAGGT TTTCCAGGGA TGTGGACCCC CCAAGCCCCT CCCAGCTGGT CGGATTTCCC GTTCCATCTC AGAAGGCACC TTCAGTGCCC GCTTCAGGCC CTTCCATCCC GAGGAGCGCC CCACCACAGC AGCTGGCACC AGTTTGGACC GATTGGTTAC TGATGTCAAG GAGAAACTGA AGCAGGCCAA GAAGTTCTGG TCCTCTCTTC CTAGCAGTGT CTGCAATGAT GAGAGGATGG CTGCAGGGAG CGGCAATGAG GATGATTGCT GGAACGGGAA AGGCCAAAGC AGGTACTTGT TTGCTGTGAC AGGAAATGGT CTAGCCAACC AGGGCAATAA TCCAGAGGTG CAGGTTGACA CCAGCAAGCC GGACATACTG ATCCTTCGTC AAGTCATGGC TCTTCGAGTT ATGACCAGTA AGATGAAGAA TGCTTACAAT GGGAACGATG TGGACTTCTT TGATATCAGT GACGAAAGCA GTGGAGAAGG AAGTGGTAGC GGATGTGAGT CTCAGCAGTG TCCTTCGGAG TTTGAGTATA ATGCAACTGA CCACTCTGGG AAGAGTGCCA ATGATAAAGC CAGCAGCGCT GGGGTCCCCG CTGCGGCCTG GCCCTACCTC CTCCCTGTCT TCTGCATCTT ATCCCTGGTT ATGCAGAGAG AGTGGAGATA A |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001192713.1 |
CDS | 87..1757 |
Translation | |
Target ORF information:
RefSeq Version | NM_001205784.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus glypican 4 (GPC4), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001205784.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621
| ATGGCACGGT TCGGCTTGCC CGCGCTGTTC TGCACCCTGG CCGCGCTCAG CGCCGCACTG CTGGCTGCCG AGCCCAAGTC GAAAAGTTGC TCGGAAGTGC GACGTCTCTA CGTGTCCAAA GGCTTCGACA AGAACGATGC CCCCATGCAC GAGATCAACG GTGATCATTT GAAAATCTGT CTCCAGGGTT ATACCTGCTG CTCTCAAGAG ATGGAGGAAA AGTACAGCCT CCAGAGTAAG GAGGATTTCA AAAGTGTGGT CAGTGAACAG TGCAATCATT TACAAGCTGT CTTTGCCTCC CGCTACAAGA AGTTTGATGA ATTCTTCAAA GAACTACTTG AAAATGCGGA AAAGTCCCTG AATGACATGT TTGTGAAGAC ATACGGCCAC TTGTACATGC AGAATTCTGA GCTATTTAAA GATCTCTTCG AAGAGTTGAA GCGCTACTAT GTGGCAGGGA ACGTGAACCT GGAGGAAATG CTGAATGACT TCTGGGCCCG CCTCCTGGAG CGCATGTTTC GCCTGGTGAA CTCCCAGTAC CACTTCACAG ACGAATATCT GGAGTGCGTG AGCAAGTACA CAGAGCAGCT GAAGCCCTTT GGAGATGTCC CTCGGAAACT GAAGCTCCAG GTCACTCGTG CATTTGTGGC AGCCCGCACT TTTGCTCAGG GCTTAGCAGT TGCAAGAGAT GTGGTGAGCA AAGTCTCAGT GGTGAATCCC ACAACCCAGT GTACCCATGC CCTGGTGAAG ATGATGTACT GCTCCCACTG CCAAGGTCTC GTGACTGTGA AACCCTGTTA CAACTATTGC TCCAACATCA TGAGAGGCTG TTTGGCCAAC CAAGGGGATC TTGATCTCGA GTGGAACAAT TTCATAGATG CTATGCTGAT GGTGGCTGAG AGGCTGGAGG GTCCTTTCAA CATTGAGTCC GTCATGGATC CCATCGACGT GAAGATATCA GATGCTATTA TGAACATGCA GGAGAACAGT GTGCAGGTAT CTCAGAAGGT TTTCCAGGGA TGTGGACCCC CCAAGCCCCT CCCAGCTGGT CGGATTTCCC GTTCCATCTC AGAAGGCACC TTCAGTGCCC GCTTCAGGCC CTTCCATCCC GAGGAGCGCC CCACCACAGC AGCTGGCACC AGTTTGGACC GATTGGTTAC TGATGTCAAG GAGAAACTGA AGCAGGCCAA GAAGTTCTGG TCCTCTCTTC CTAGCAGTGT CTGCAATGAT GAGAGGATGG CTGCAGGGAG CGGCAATGAG GATGATTGCT GGAACGGGAA AGGCCAAAGC AGGTACTTGT TTGCTGTGAC AGGAAATGGT CTAGCCAACC AGGGCAATAA TCCAGAGGTG CAGGTTGACA CCAGCAAGCC GGACATACTG ATCCTTCGTC AAGTCATGGC TCTTCGAGTT ATGACCAGTA AGATGAAGAA TGCTTACAAT GGGAACGATG TGGACTTCTT TGATATCAGT GACGAAAGCA GTGGAGAAGG AAGTGGTAGC GGATGTGAGT CTCAGCAGTG TCCTTCGGAG TTTGAGTATA ATGCAACTGA CCACTCTGGG AAGAGTGCCA ATGATAAAGC CAGCAGCGCT GGGGTCCCCG CTGCGGCCTG GCCCTACCTC CTCCCTGTCT TCTGCATCTT ATCCCTGGTT ATGCAGAGAG AGTGGAGATA A |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa54580 |
Clone ID Related Accession (Same CDS sequence) |
XM_010821430.1
|
Accession Version |
XM_010821430.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1551bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-06 |
Organism |
Bos taurus(cattle) |
Product |
glypican-4 isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037357.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Bos taurus Annotation Release 106
Annotation Version :: 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501
| ATGGAGGGGA TTAGACCAGT ATCTGGACCA GTAAAATATG GTGATCATTT GAAAATCTGT CTCCAGGGTT ATACCTGCTG CTCTCAAGAG ATGGAGGAAA AGTACAGCCT CCAGAGTAAG GAGGATTTCA AAAGTGTGGT CAGTGAACAG TGCAATCATT TACAAGCTGT CTTTGCCTCC CGCTACAAGA AGTTTGATGA ATTCTTCAAA GAACTACTTG AAAATGCGGA AAAGTCCCTG AATGACATGT TTGTGAAGAC ATACGGCCAC TTGTACATGC AGAATTCTGA GCTATTTAAA GATCTCTTCG AAGAGTTGAA GCGCTACTAT GTGGCAGGGA ACGTGAACCT GGAGGAAATG CTGAATGACT TCTGGGCCCG CCTCCTGGAG CGCATGTTTC GCCTGGTGAA CTCCCAGTAC CACTTCACAG ACGAATATCT GGAGTGCGTG AGCAAGTACA CAGAGCAGCT GAAGCCCTTT GGAGATGTCC CTCGGAAACT GAAGCTCCAG GTCACTCGTG CATTTGTGGC AGCCCGCACT TTTGCTCAGG GCTTAGCAGT TGCAAGAGAT GTGGTGAGCA AAGTCTCAGT GGTGAATCCC ACAACCCAGT GTACCCATGC CCTGGTGAAG ATGATGTACT GCTCCCACTG CCAAGGTCTC GTGACTGTGA AACCCTGTTA CAACTATTGC TCCAACATCA TGAGAGGCTG TTTGGCCAAC CAAGGGGATC TTGATCTCGA GTGGAACAAT TTCATAGATG CTATGCTGAT GGTGGCTGAG AGGCTGGAGG GTCCTTTCAA CATTGAGTCC GTCATGGATC CCATCGACGT GAAGATATCA GATGCTATTA TGAACATGCA GGAGAACAGT GTGCAGGTAT CTCAGAAGGT TTTCCAGGGA TGTGGACCCC CCAAGCCCCT CCCAGCTGGT CGGATTTCCC GTTCCATCTC AGAAGGCACC TTCAGTGCCC GCTTCAGGCC CTTCCATCCC GAGGAGCGCC CCACCACAGC AGCTGGCACC AGTTTGGACC GATTGGTTAC TGATGTCAAG GAGAAACTGA AGCAGGCCAA GAAGTTCTGG TCCTCTCTTC CTAGCAGTGT CTGCAATGAT GAGAGGATGG CTGCAGGGAG CGGCAATGAG GATGATTGCT GGAACGGGAA AGGCCAAAGC AGGTACTTGT TTGCTGTGAC AGGAAATGGT CTAGCCAACC AGGGCAATAA TCCAGAGGTG CAGGTTGACA CCAGCAAGCC GGACATACTG ATCCTTCGTC AAGTCATGGC TCTTCGAGTT ATGACCAGTA AGATGAAGAA TGCTTACAAT GGGAACGATG TGGACTTCTT TGATATCAGT GACGAAAGCA GTGGAGAAGG AAGTGGTAGC GGATGTGAGT CTCAGCAGTG TCCTTCGGAG TTTGAGTATA ATGCAACTGA CCACTCTGGG AAGAGTGCCA ATGATAAAGC CAGCAGCGCT GGGGTCCCCG CTGCGGCCTG GCCCTACCTC CTCCCTGTCT TCTGCATCTT ATCCCTGGTT ATGCAGAGAG AGTGGAGATA A |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_010819732.1 |
CDS | 16..1566 |
Translation | |
Target ORF information:
RefSeq Version | XM_010821430.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus glypican 4 (GPC4), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_010821430.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501
| ATGGAGGGGA TTAGACCAGT ATCTGGACCA GTAAAATATG GTGATCATTT GAAAATCTGT CTCCAGGGTT ATACCTGCTG CTCTCAAGAG ATGGAGGAAA AGTACAGCCT CCAGAGTAAG GAGGATTTCA AAAGTGTGGT CAGTGAACAG TGCAATCATT TACAAGCTGT CTTTGCCTCC CGCTACAAGA AGTTTGATGA ATTCTTCAAA GAACTACTTG AAAATGCGGA AAAGTCCCTG AATGACATGT TTGTGAAGAC ATACGGCCAC TTGTACATGC AGAATTCTGA GCTATTTAAA GATCTCTTCG AAGAGTTGAA GCGCTACTAT GTGGCAGGGA ACGTGAACCT GGAGGAAATG CTGAATGACT TCTGGGCCCG CCTCCTGGAG CGCATGTTTC GCCTGGTGAA CTCCCAGTAC CACTTCACAG ACGAATATCT GGAGTGCGTG AGCAAGTACA CAGAGCAGCT GAAGCCCTTT GGAGATGTCC CTCGGAAACT GAAGCTCCAG GTCACTCGTG CATTTGTGGC AGCCCGCACT TTTGCTCAGG GCTTAGCAGT TGCAAGAGAT GTGGTGAGCA AAGTCTCAGT GGTGAATCCC ACAACCCAGT GTACCCATGC CCTGGTGAAG ATGATGTACT GCTCCCACTG CCAAGGTCTC GTGACTGTGA AACCCTGTTA CAACTATTGC TCCAACATCA TGAGAGGCTG TTTGGCCAAC CAAGGGGATC TTGATCTCGA GTGGAACAAT TTCATAGATG CTATGCTGAT GGTGGCTGAG AGGCTGGAGG GTCCTTTCAA CATTGAGTCC GTCATGGATC CCATCGACGT GAAGATATCA GATGCTATTA TGAACATGCA GGAGAACAGT GTGCAGGTAT CTCAGAAGGT TTTCCAGGGA TGTGGACCCC CCAAGCCCCT CCCAGCTGGT CGGATTTCCC GTTCCATCTC AGAAGGCACC TTCAGTGCCC GCTTCAGGCC CTTCCATCCC GAGGAGCGCC CCACCACAGC AGCTGGCACC AGTTTGGACC GATTGGTTAC TGATGTCAAG GAGAAACTGA AGCAGGCCAA GAAGTTCTGG TCCTCTCTTC CTAGCAGTGT CTGCAATGAT GAGAGGATGG CTGCAGGGAG CGGCAATGAG GATGATTGCT GGAACGGGAA AGGCCAAAGC AGGTACTTGT TTGCTGTGAC AGGAAATGGT CTAGCCAACC AGGGCAATAA TCCAGAGGTG CAGGTTGACA CCAGCAAGCC GGACATACTG ATCCTTCGTC AAGTCATGGC TCTTCGAGTT ATGACCAGTA AGATGAAGAA TGCTTACAAT GGGAACGATG TGGACTTCTT TGATATCAGT GACGAAAGCA GTGGAGAAGG AAGTGGTAGC GGATGTGAGT CTCAGCAGTG TCCTTCGGAG TTTGAGTATA ATGCAACTGA CCACTCTGGG AAGAGTGCCA ATGATAAAGC CAGCAGCGCT GGGGTCCCCG CTGCGGCCTG GCCCTACCTC CTCCCTGTCT TCTGCATCTT ATCCCTGGTT ATGCAGAGAG AGTGGAGATA A |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
A whole-genome assembly of the domestic cow, Bos taurus.
Genome biology10(4)R42(2009)
Zimin AV,Delcher AL,Florea L,Kelley DR,Schatz MC,Puiu D,Hanrahan F,Pertea G,Van Tassell CP,Sonstegard TS,Mar?ais G,Roberts M,Subramanian P,Yorke JA,Salzberg SL |