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CXCL12 cDNA ORF clone, Bos taurus(cattle)

Summary

Gene Symbol CXCL12
Entrez Gene ID 613811
Full Name C-X-C motif chemokine ligand 12
Synonyms SDF1
General protein information
Preferred Names

C-X-C motif chemokine ligand 12

Names

stromal cell-derived factor 1
chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1)
chemokine C-X-C motif ligand 12
Gene Type protein-coding
Organism Bos taurus(cattle)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_001113174.1 NP_001106645.1 stromal cell-derived factor 1 precursor
XM_005226616.2 XP_005226673.1 stromal cell-derived factor 1 isoform X2
XM_005226615.3 XP_005226672.1 stromal cell-derived factor 1 isoform X1
XM_005226615.4 XP_005226672.1 stromal cell-derived factor 1 isoform X1
XM_005226618.3 XP_005226675.1 stromal cell-derived factor 1 isoform X4
XM_005226618.4 XP_005226675.1 stromal cell-derived factor 1 isoform X4
XM_005226616.1 XP_005226673.1 stromal cell-derived factor 1 isoform X2
XM_005226617.1 XP_005226674.1 stromal cell-derived factor 1 isoform X3
XM_005226617.2 XP_005226674.1 stromal cell-derived factor 1 isoform X3

Pathways from BioSystems


Homologies


Homo sapiens (human) CXCL12 NP_001171605.1
Rattus norvegicus (Norway rat) Cxcl12 NP_001029055.1
Mus musculus (house mouse) Cxcl12 NP_001012495.1
Gallus gallus (chicken) CXCL12 NP_989841.1
Bos taurus (cattle) CXCL12 NP_001106645.1
Pan troglodytes (chimpanzee) LOC741624 XP_001157443.2
CXCL12 NP_001028106.1
Canis lupus familiaris (dog) CXCL12 NP_001121569.1
Xenopus tropicalis (tropical clawed frog) cxcl12 NP_001015764.1

Gene Ontology


Bibliography

Related articles in PubMed

SDF-1 in Mammary Fibroblasts of Bovine with Mastitis Induces EMT and Inflammatory Response of Epithelial Cells.
He G, Ma M, Yang W, Wang H, Zhang Y, Gao MQ
International journal of biological sciences13(5)604-614(2017)

Expression and regulation of stromal cell-derived factor-1 (SDF1) and chemokine CXC motif receptor 4 (CXCR4) in equine and bovine preovulatory follicles.
Sayasith K, Sirois J
Molecular and cellular endocrinology391(1-2)10-21(2014 Jun)

[Polymorphism of intron 2 of the SDF1 gene in Galloway, Hereford, and Russian Black Pied cattle].
Iudin NS, Nefedova MV, Kobzev VF, Romashenko AG, Voevoda MI
Genetika47(2)279-83(2011 Feb)

A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)

An ordered comparative map of the cattle and human genomes.
Band MR, Larson JH, Rebeiz M, Green CA, Heyen DW, Donovan J, Windish R, Steining C, Mahyuddin P, Womack JE, Lewin HA
Genome research10(9)1359-68(2000 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

There is a potential link between follicular SDF1/CXCR4 activation and the regulation of ovulation-related genes in cows and horses.
Title: Expression and regulation of stromal cell-derived factor-1 (SDF1) and chemokine CXC motif receptor 4 (CXCR4) in equine and bovine preovulatory follicles.

Polymorphism of intron 2 of the SDF1 gene in Galloway, Hereford, and Russian Black Pied cattle
Title: [Polymorphism of intron 2 of the SDF1 gene in Galloway, Hereford, and Russian Black Pied cattle].

The following CXCL12 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CXCL12 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OBa40774 NM_001113174.1
Latest version!		 Bos taurus C-X-C motif chemokine ligand 12 (CXCL12), mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $104.30
$149.00
OBa34376 XM_005226615.4
Latest version!		 Bos taurus C-X-C motif chemokine ligand 12 (CXCL12), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $104.30
$149.00
OBa34377 XM_005226616.1
Latest version!		 Bos taurus chemokine (C-X-C motif) ligand 12 (CXCL12), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $104.30
$149.00
OBa34378 XM_005226617.2
Latest version!		 Bos taurus C-X-C motif chemokine ligand 12 (CXCL12), transcript variant X3, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $104.30
$149.00
OBa34379 XM_005226618.4
Latest version!		 Bos taurus C-X-C motif chemokine ligand 12 (CXCL12), transcript variant X4, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $104.30
$149.00
OBa231669 XM_005226616.2
Latest version!		 Bos taurus C-X-C motif chemokine ligand 12 (CXCL12), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00
View Old Accession Versions >>
OBa34376 XM_005226615.3 Bos taurus chemokine (C-X-C motif) ligand 12 (CXCL12), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $104.30
$149.00
OBa34379 XM_005226618.3 Bos taurus chemokine (C-X-C motif) ligand 12 (CXCL12), transcript variant X4, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $104.30
$149.00
OBa34378 XM_005226617.1 Bos taurus chemokine (C-X-C motif) ligand 12 (CXCL12), transcript variant X3, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $104.30
$149.00
Hide Old Accession Versions >>

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone 30% OFF
2-4 Clone 40% OFF
5 or more Clone 50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OBa40774
Clone ID Related Accession (Same CDS sequence) NM_001113174.1
Accession Version NM_001113174.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 270bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-05-13
Organism Bos taurus(cattle)
Product stromal cell-derived factor 1 precursor
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC119979.1. On or before Dec 25, 2007 this sequence version replaced XM_001250631.1, XM_864886.2, XM_874568.2. ##Evidence-Data-START## Transcript exon combination :: BC119979.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145415, SAMN03145426 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
ATGGATGCCA AGGTCTTCGT CGTGCTGGCC CTCGTGCTGA CTGCGCTGTG CCTCAGCGAC 
GCGAAACCGG TCAGCCTGAG CTACAGATGC CCTTGCCGAT TCTTTGAGAG CCATGTCGCC 
AAAGCCAACG TCAAGCACCT CAAAATCCTC AACACTCCAA ACTGCTCCCT TCAGATCGTG 
GCAAGGCTGA AGAACAACAA TAGGCAAGTG TGCATTGACC CGAAATTGAA GTGGATTCAG 
GAATACCTGG ACAAAGCTTT AAACAAGTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001106645.1
CDS37..306
Translation

Target ORF information:

RefSeq Version NM_001113174.1
Organism Bos taurus(cattle)
Definition Bos taurus C-X-C motif chemokine ligand 12 (CXCL12), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001113174.1

ORF Insert Sequence:

1
61
121
181
241
ATGGATGCCA AGGTCTTCGT CGTGCTGGCC CTCGTGCTGA CTGCGCTGTG CCTCAGCGAC 
GCGAAACCGG TCAGCCTGAG CTACAGATGC CCTTGCCGAT TCTTTGAGAG CCATGTCGCC 
AAAGCCAACG TCAAGCACCT CAAAATCCTC AACACTCCAA ACTGCTCCCT TCAGATCGTG 
GCAAGGCTGA AGAACAACAA TAGGCAAGTG TGCATTGACC CGAAATTGAA GTGGATTCAG 
GAATACCTGG ACAAAGCTTT AAACAAGTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OBa34376
Clone ID Related Accession (Same CDS sequence) XM_005226615.3 , XM_005226615.4
Accession Version XM_005226615.3 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 360bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-01-25
Organism Bos taurus(cattle)
Product stromal cell-derived factor 1 isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104627.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005226615.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
ATGGATGCCA AGGTCTTCGT CGTGCTGGCC CTCGTGCTGA CTGCGCTGTG CCTCAGCGAC 
GCGAAACCGG TCAGCCTGAG CTACAGATGC CCTTGCCGAT TCTTTGAGAG CCATGTCGCC 
AAAGCCAACG TCAAGCACCT CAAAATCCTC AACACTCCAA ACTGCTCCCT TCAGATCGTG 
GCAAGGCTGA AGAACAACAA TAGGCAAGTG TGCATTGACC CGAAATTGAA GTGGATTCAG 
GAATACCTGG ACAAAGCTTT AAACAAGGGG AGCAGAGAAG AAAAAGTGGG GAAAAAAGAA 
AAGATAGGAA AAAAGAAGCG ACAGAAGAAG AGAAAGGCTG CTCAGAAAAG GAAAATCTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005226672.1
CDS101..460
Translation

Target ORF information:

RefSeq Version XM_005226615.3
Organism Bos taurus(cattle)
Definition Bos taurus chemokine (C-X-C motif) ligand 12 (CXCL12), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_005226615.3

ORF Insert Sequence:

1
61
121
181
241
301
ATGGATGCCA AGGTCTTCGT CGTGCTGGCC CTCGTGCTGA CTGCGCTGTG CCTCAGCGAC 
GCGAAACCGG TCAGCCTGAG CTACAGATGC CCTTGCCGAT TCTTTGAGAG CCATGTCGCC 
AAAGCCAACG TCAAGCACCT CAAAATCCTC AACACTCCAA ACTGCTCCCT TCAGATCGTG 
GCAAGGCTGA AGAACAACAA TAGGCAAGTG TGCATTGACC CGAAATTGAA GTGGATTCAG 
GAATACCTGG ACAAAGCTTT AAACAAGGGG AGCAGAGAAG AAAAAGTGGG GAAAAAAGAA 
AAGATAGGAA AAAAGAAGCG ACAGAAGAAG AGAAAGGCTG CTCAGAAAAG GAAAATCTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OBa34376
Clone ID Related Accession (Same CDS sequence) XM_005226615.3 , XM_005226615.4
Accession Version XM_005226615.4 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 360bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-05-06
Organism Bos taurus(cattle)
Product stromal cell-derived factor 1 isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037355.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005226615.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
ATGGATGCCA AGGTCTTCGT CGTGCTGGCC CTCGTGCTGA CTGCGCTGTG CCTCAGCGAC 
GCGAAACCGG TCAGCCTGAG CTACAGATGC CCTTGCCGAT TCTTTGAGAG CCATGTCGCC 
AAAGCCAACG TCAAGCACCT CAAAATCCTC AACACTCCAA ACTGCTCCCT TCAGATCGTG 
GCAAGGCTGA AGAACAACAA TAGGCAAGTG TGCATTGACC CGAAATTGAA GTGGATTCAG 
GAATACCTGG ACAAAGCTTT AAACAAGGGG AGCAGAGAAG AAAAAGTGGG GAAAAAAGAA 
AAGATAGGAA AAAAGAAGCG ACAGAAGAAG AGAAAGGCTG CTCAGAAAAG GAAAATCTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005226672.1
CDS101..460
Translation

Target ORF information:

RefSeq Version XM_005226615.4
Organism Bos taurus(cattle)
Definition Bos taurus C-X-C motif chemokine ligand 12 (CXCL12), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_005226615.4

ORF Insert Sequence:

1
61
121
181
241
301
ATGGATGCCA AGGTCTTCGT CGTGCTGGCC CTCGTGCTGA CTGCGCTGTG CCTCAGCGAC 
GCGAAACCGG TCAGCCTGAG CTACAGATGC CCTTGCCGAT TCTTTGAGAG CCATGTCGCC 
AAAGCCAACG TCAAGCACCT CAAAATCCTC AACACTCCAA ACTGCTCCCT TCAGATCGTG 
GCAAGGCTGA AGAACAACAA TAGGCAAGTG TGCATTGACC CGAAATTGAA GTGGATTCAG 
GAATACCTGG ACAAAGCTTT AAACAAGGGG AGCAGAGAAG AAAAAGTGGG GAAAAAAGAA 
AAGATAGGAA AAAAGAAGCG ACAGAAGAAG AGAAAGGCTG CTCAGAAAAG GAAAATCTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OBa34377
Clone ID Related Accession (Same CDS sequence) XM_005226616.1
Accession Version XM_005226616.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 354bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-01-25
Organism Bos taurus(cattle)
Product stromal cell-derived factor 1 isoform X2
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104627.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
ATGGATGCCA AGGTCTTCGT CGTGCTGGCC CTCGTGCTGA CTGCGCTGTG CCTCAGCGAC 
GCGAAACCGG TCAGCCTGAG CTACAGATGC CCTTGCCGAT TCTTTGAGAG CCATGTCGCC 
AAAGCCAACG TCAAGCACCT CAAAATCCTC AACACTCCAA ACTGCTCCCT TCAGATCGTG 
GCAAGGCTGA AGAACAACAA TAGGCAAGTG TGCATTGACC CGAAATTGAA GTGGATTCAG 
GAATACCTGG ACAAAGCTTT AAACAAACCC AGCCCTACTC TCTCGGGCCT GACCTCTGCC 
CTGGGAACTG ACCCGGCCAG GACTACTGTC GGCGTCACCA GCAGCGGGAG CTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005226673.1
CDS101..454
Translation

Target ORF information:

RefSeq Version XM_005226616.1
Organism Bos taurus(cattle)
Definition Bos taurus chemokine (C-X-C motif) ligand 12 (CXCL12), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_005226616.1

ORF Insert Sequence:

1
61
121
181
241
301
ATGGATGCCA AGGTCTTCGT CGTGCTGGCC CTCGTGCTGA CTGCGCTGTG CCTCAGCGAC 
GCGAAACCGG TCAGCCTGAG CTACAGATGC CCTTGCCGAT TCTTTGAGAG CCATGTCGCC 
AAAGCCAACG TCAAGCACCT CAAAATCCTC AACACTCCAA ACTGCTCCCT TCAGATCGTG 
GCAAGGCTGA AGAACAACAA TAGGCAAGTG TGCATTGACC CGAAATTGAA GTGGATTCAG 
GAATACCTGG ACAAAGCTTT AAACAAACCC AGCCCTACTC TCTCGGGCCT GACCTCTGCC 
CTGGGAACTG ACCCGGCCAG GACTACTGTC GGCGTCACCA GCAGCGGGAG CTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OBa34378
Clone ID Related Accession (Same CDS sequence) XM_005226617.1 , XM_005226617.2
Accession Version XM_005226617.1 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 282bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-01-25
Organism Bos taurus(cattle)
Product stromal cell-derived factor 1 isoform X3
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104627.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
ATGGATGCCA AGGTCTTCGT CGTGCTGGCC CTCGTGCTGA CTGCGCTGTG CCTCAGCGAC 
GCGAAACCGG TCAGCCTGAG CTACAGATGC CCTTGCCGAT TCTTTGAGAG CCATGTCGCC 
AAAGCCAACG TCAAGCACCT CAAAATCCTC AACACTCCAA ACTGCTCCCT TCAGATCGTG 
GCAAGGCTGA AGAACAACAA TAGGCAAGTG TGCATTGACC CGAAATTGAA GTGGATTCAG 
GAATACCTGG ACAAAGCTTT AAACAAGAGG TTCAAGATGT GA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005226674.1
CDS101..382
Translation

Target ORF information:

RefSeq Version XM_005226617.1
Organism Bos taurus(cattle)
Definition Bos taurus chemokine (C-X-C motif) ligand 12 (CXCL12), transcript variant X3, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_005226617.1

ORF Insert Sequence:

1
61
121
181
241
ATGGATGCCA AGGTCTTCGT CGTGCTGGCC CTCGTGCTGA CTGCGCTGTG CCTCAGCGAC 
GCGAAACCGG TCAGCCTGAG CTACAGATGC CCTTGCCGAT TCTTTGAGAG CCATGTCGCC 
AAAGCCAACG TCAAGCACCT CAAAATCCTC AACACTCCAA ACTGCTCCCT TCAGATCGTG 
GCAAGGCTGA AGAACAACAA TAGGCAAGTG TGCATTGACC CGAAATTGAA GTGGATTCAG 
GAATACCTGG ACAAAGCTTT AAACAAGAGG TTCAAGATGT GA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OBa34378
Clone ID Related Accession (Same CDS sequence) XM_005226617.1 , XM_005226617.2
Accession Version XM_005226617.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 282bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-05-06
Organism Bos taurus(cattle)
Product stromal cell-derived factor 1 isoform X3
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037355.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005226617.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
ATGGATGCCA AGGTCTTCGT CGTGCTGGCC CTCGTGCTGA CTGCGCTGTG CCTCAGCGAC 
GCGAAACCGG TCAGCCTGAG CTACAGATGC CCTTGCCGAT TCTTTGAGAG CCATGTCGCC 
AAAGCCAACG TCAAGCACCT CAAAATCCTC AACACTCCAA ACTGCTCCCT TCAGATCGTG 
GCAAGGCTGA AGAACAACAA TAGGCAAGTG TGCATTGACC CGAAATTGAA GTGGATTCAG 
GAATACCTGG ACAAAGCTTT AAACAAGAGG TTCAAGATGT GA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005226674.1
CDS159..440
Translation

Target ORF information:

RefSeq Version XM_005226617.2
Organism Bos taurus(cattle)
Definition Bos taurus C-X-C motif chemokine ligand 12 (CXCL12), transcript variant X3, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_005226617.2

ORF Insert Sequence:

1
61
121
181
241
ATGGATGCCA AGGTCTTCGT CGTGCTGGCC CTCGTGCTGA CTGCGCTGTG CCTCAGCGAC 
GCGAAACCGG TCAGCCTGAG CTACAGATGC CCTTGCCGAT TCTTTGAGAG CCATGTCGCC 
AAAGCCAACG TCAAGCACCT CAAAATCCTC AACACTCCAA ACTGCTCCCT TCAGATCGTG 
GCAAGGCTGA AGAACAACAA TAGGCAAGTG TGCATTGACC CGAAATTGAA GTGGATTCAG 
GAATACCTGG ACAAAGCTTT AAACAAGAGG TTCAAGATGT GA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OBa34379
Clone ID Related Accession (Same CDS sequence) XM_005226618.3 , XM_005226618.4
Accession Version XM_005226618.3 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 273bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-01-25
Organism Bos taurus(cattle)
Product stromal cell-derived factor 1 isoform X4
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104627.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005226618.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
ATGGATGCCA AGGTCTTCGT CGTGCTGGCC CTCGTGCTGA CTGCGCTGTG CCTCAGCGAC 
GCGAAACCGG TCAGCCTGAG CTACAGATGC CCTTGCCGAT TCTTTGAGAG CCATGTCGCC 
AAAGCCAACG TCAAGCACCT CAAAATCCTC AACACTCCAA ACTGCTCCCT TCAGATCGTG 
GCAAGGCTGA AGAACAACAA TAGGCAAGTG TGCATTGACC CGAAATTGAA GTGGATTCAG 
GAATACCTGG ACAAAGCTTT AAACAAACGC TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005226675.1
CDS101..373
Translation

Target ORF information:

RefSeq Version XM_005226618.3
Organism Bos taurus(cattle)
Definition Bos taurus chemokine (C-X-C motif) ligand 12 (CXCL12), transcript variant X4, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_005226618.3

ORF Insert Sequence:

1
61
121
181
241
ATGGATGCCA AGGTCTTCGT CGTGCTGGCC CTCGTGCTGA CTGCGCTGTG CCTCAGCGAC 
GCGAAACCGG TCAGCCTGAG CTACAGATGC CCTTGCCGAT TCTTTGAGAG CCATGTCGCC 
AAAGCCAACG TCAAGCACCT CAAAATCCTC AACACTCCAA ACTGCTCCCT TCAGATCGTG 
GCAAGGCTGA AGAACAACAA TAGGCAAGTG TGCATTGACC CGAAATTGAA GTGGATTCAG 
GAATACCTGG ACAAAGCTTT AAACAAACGC TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OBa34379
Clone ID Related Accession (Same CDS sequence) XM_005226618.3 , XM_005226618.4
Accession Version XM_005226618.4 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 273bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-05-06
Organism Bos taurus(cattle)
Product stromal cell-derived factor 1 isoform X4
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037355.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005226618.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
ATGGATGCCA AGGTCTTCGT CGTGCTGGCC CTCGTGCTGA CTGCGCTGTG CCTCAGCGAC 
GCGAAACCGG TCAGCCTGAG CTACAGATGC CCTTGCCGAT TCTTTGAGAG CCATGTCGCC 
AAAGCCAACG TCAAGCACCT CAAAATCCTC AACACTCCAA ACTGCTCCCT TCAGATCGTG 
GCAAGGCTGA AGAACAACAA TAGGCAAGTG TGCATTGACC CGAAATTGAA GTGGATTCAG 
GAATACCTGG ACAAAGCTTT AAACAAACGC TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005226675.1
CDS101..373
Translation

Target ORF information:

RefSeq Version XM_005226618.4
Organism Bos taurus(cattle)
Definition Bos taurus C-X-C motif chemokine ligand 12 (CXCL12), transcript variant X4, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_005226618.4

ORF Insert Sequence:

1
61
121
181
241
ATGGATGCCA AGGTCTTCGT CGTGCTGGCC CTCGTGCTGA CTGCGCTGTG CCTCAGCGAC 
GCGAAACCGG TCAGCCTGAG CTACAGATGC CCTTGCCGAT TCTTTGAGAG CCATGTCGCC 
AAAGCCAACG TCAAGCACCT CAAAATCCTC AACACTCCAA ACTGCTCCCT TCAGATCGTG 
GCAAGGCTGA AGAACAACAA TAGGCAAGTG TGCATTGACC CGAAATTGAA GTGGATTCAG 
GAATACCTGG ACAAAGCTTT AAACAAACGC TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OBa231669
Clone ID Related Accession (Same CDS sequence) XM_005226616.2
Accession Version XM_005226616.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 354bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-05-06
Organism Bos taurus(cattle)
Product stromal cell-derived factor 1 isoform X2
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037355.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005226616.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
ATGGATGCCA AGGTCTTCGT CGTGCTGGCC CTCGTGCTGA CTGCGCTGTG CCTCAGCGAC 
GCGAAACCGG TCAGCCTGAG CTACAGATGC CCTTGCCGAT TCTTTGAGAG CCATGTCGCC 
AAAGCCAACG TCAAGCACCT CAAAATCCTC AACACTCCAA ACTGCTCCCT TCAGATCGTG 
GCAAGGCTGA AGAACAACAA TAGGCAAGTG TGCATTGACC CGAAATTGAA GTGGATTCAG 
GAATACCTGG ACAAAGCTTT AAACAAACCC AGCCCTACTC TCTCGGGCCT GACCTCTGCC 
CTGGGAACCG ACCCGGCCAG GACTACTGTC GGCGTCACCA GCAGCGGGAG CTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005226673.1
CDS101..454
Translation

Target ORF information:

RefSeq Version XM_005226616.2
Organism Bos taurus(cattle)
Definition Bos taurus C-X-C motif chemokine ligand 12 (CXCL12), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_005226616.2

ORF Insert Sequence:

1
61
121
181
241
301
ATGGATGCCA AGGTCTTCGT CGTGCTGGCC CTCGTGCTGA CTGCGCTGTG CCTCAGCGAC 
GCGAAACCGG TCAGCCTGAG CTACAGATGC CCTTGCCGAT TCTTTGAGAG CCATGTCGCC 
AAAGCCAACG TCAAGCACCT CAAAATCCTC AACACTCCAA ACTGCTCCCT TCAGATCGTG 
GCAAGGCTGA AGAACAACAA TAGGCAAGTG TGCATTGACC CGAAATTGAA GTGGATTCAG 
GAATACCTGG ACAAAGCTTT AAACAAACCC AGCCCTACTC TCTCGGGCCT GACCTCTGCC 
CTGGGAACCG ACCCGGCCAG GACTACTGTC GGCGTCACCA GCAGCGGGAG CTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

SDF-1 in Mammary Fibroblasts of Bovine with Mastitis Induces EMT and Inflammatory Response of Epithelial Cells.
International journal of biological sciences13(5)604-614(2017)
He G,Ma M,Yang W,Wang H,Zhang Y,Gao MQ


book

Expression and regulation of stromal cell-derived factor-1 (SDF1) and chemokine CXC motif receptor 4 (CXCR4) in equine and bovine preovulatory follicles.
Molecular and cellular endocrinology391(1-2)10-21(2014 Jun)
Sayasith K,Sirois J


book

[Polymorphism of intron 2 of the SDF1 gene in Galloway, Hereford, and Russian Black Pied cattle].
Genetika47(2)279-83(2011 Feb)
Iudin NS,Nefedova MV,Kobzev VF,Romashenko AG,Voevoda MI


book

A whole-genome assembly of the domestic cow, Bos taurus.
Genome biology10(4)R42(2009)
Zimin AV,Delcher AL,Florea L,Kelley DR,Schatz MC,Puiu D,Hanrahan F,Pertea G,Van Tassell CP,Sonstegard TS,Mar?ais G,Roberts M,Subramanian P,Yorke JA,Salzberg SL


book

An ordered comparative map of the cattle and human genomes.
Genome research10(9)1359-68(2000 Sep)
Band MR,Larson JH,Rebeiz M,Green CA,Heyen DW,Donovan J,Windish R,Steining C,Mahyuddin P,Womack JE,Lewin HA