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PJVK cDNA ORF clone, Bos taurus(cattle)

Summary

Gene Symbol PJVK
Entrez Gene ID 618114
Full Name pejvakin
Synonyms DFNB59
General protein information
Preferred Names

pejvakin

Names

pejvakin
deafness, autosomal recessive 59
Gene Type protein-coding
Organism Bos taurus(cattle)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_001193183.1 NP_001180112.1 pejvakin
XM_024978243.1 XP_024834011.1 pejvakin isoform X1

Pathways from BioSystems


Homologies


Homo sapiens (human) DFNB59 NP_001036167.1
Pan troglodytes (chimpanzee) DFNB59 XP_515941.2
Mus musculus (house mouse) Dfnb59 NP_001074180.1
Danio rerio (zebrafish) dfnb59 XP_001340677.2
Xenopus tropicalis (tropical clawed frog) dfnb59 XP_002935728.1
LOC708668 XP_001097155.2
Canis lupus familiaris (dog) DFNB59 XP_535979.2
Rattus norvegicus (Norway rat) Dfnb59 XP_006234488.1
Gallus gallus (chicken) DFNB59 XP_426573.2
Bos taurus (cattle) DFNB59 NP_001180112.1

Gene Ontology


Bibliography

Related articles in PubMed

A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following PJVK gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PJVK cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OBa37675 NM_001193183.1
Latest version!		 Bos taurus pejvakin (PJVK), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $258.30
$369.00
OBa227579 XM_024978243.1
Latest version!		 Bos taurus pejvakin (PJVK), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $69.30
$99.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone 30% OFF
2-4 Clone 40% OFF
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OBa37675
Clone ID Related Accession (Same CDS sequence) NM_001193183.1
Accession Version NM_001193183.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1059bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-05-28
Organism Bos taurus(cattle)
Product pejvakin
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from NKLS02000002.1. On Jul 17, 2010 this sequence version replaced XM_870440.4. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMN03145413, SAMN03145415 [ECO:0000350] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
ATGTTTGCTG CTGCTACCAA GAGCTTTGTC AAACAAGTTG GAGATGGAGG GAGATTAGTT 
CCTGTTCCAA GCCTCAGTGA GGCTGACAAA TACCAACCTC TAAGTCTGGT GGTAAAAAAG 
AAGCGATGTT TTCTGTTTCC TAGATATAAA TTTACCTCAA CACCTTTTAC ACTGAAAGAT 
ATTCTTCTAG GAAACAGAGA AATTTCAGCT GGTATTTCAT CTTATCAGCT ACTGAATTAT 
GAAGATGAAT CAGACGTTTC ACTCTATGGA AGACGAGGCA ACCATATTGT GAGTGATGTT 
GGGATTAACG TTACTGGATC AGATTCCATT GCTGTAAAAG CTTCATTTGG TGTAGTAACC 
AAACATGAAG TGGAAGTATC AACGTTACTC AAGGAAATTA CTACACGAAA AATTAATTTT 
GACCACAGTT TGATACGTCA GTCAAGGAGC AGCAGAAAGG CAGTGTTGTG TGTGGTCATG 
GAAAGCATCC GAACCACACG GCAGTGCTCA CTGTCTGTGC ACGCTGGAAT TCGTGGGGAA 
GCCATGAGGT TTCATTTTAT GGATGAACAG AATCCCAAGG GAAGGGACAA AGCTATTGTT 
TTTCCAGCAC ATACAACCAT AGCTTTCAGT GTTTTTGAAC TCTTCATTTA CTTGGATGGT 
GCCTTTGACC TTTGTGTCAC TTCAGTGTCA AAAGGAGGAT TTGAAAGGGA AGAAACAGCA 
ACATTTGCAC TGCTCTACAG ATTGAGAAAT ATACTATTTG AAAGAAATAG AAGAGTGATG 
GATGCCATTT CTCGTTCACA GCTTTACTTA GATGATCTTT TTTCTGACTA TTATGACAAA 
CCTCTCAGCA TGAGTGATAT TTCACTCAAA GAAGGTACTC ACATCCGTGT TAACTTACTT 
AATCACAACA TTCCAAAAGG ACCTTGCATA CTCTGTGGAA TGGGGAACTT TAAAAGGGAG 
ACAGTTTACG GGTGTTTTCA GTGCTCTGTT GATGGGCAGA AGTACGTGCG ACTTCATGCA 
GTTCCTTGTT TTGATATTTG GCACAAGAGA ATGAAATAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001180112.1
CDS1..1059
Translation

Target ORF information:

RefSeq Version NM_001193183.1
Organism Bos taurus(cattle)
Definition Bos taurus pejvakin (PJVK), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001193183.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
ATGTTTGCTG CTGCTACCAA GAGCTTTGTC AAACAAGTTG GAGATGGAGG GAGATTAGTT 
CCTGTTCCAA GCCTCAGTGA GGCTGACAAA TACCAACCTC TAAGTCTGGT GGTAAAAAAG 
AAGCGATGTT TTCTGTTTCC TAGATATAAA TTTACCTCAA CACCTTTTAC ACTGAAAGAT 
ATTCTTCTAG GAAACAGAGA AATTTCAGCT GGTATTTCAT CTTATCAGCT ACTGAATTAT 
GAAGATGAAT CAGACGTTTC ACTCTATGGA AGACGAGGCA ACCATATTGT GAGTGATGTT 
GGGATTAACG TTACTGGATC AGATTCCATT GCTGTAAAAG CTTCATTTGG TGTAGTAACC 
AAACATGAAG TGGAAGTATC AACGTTACTC AAGGAAATTA CTACACGAAA AATTAATTTT 
GACCACAGTT TGATACGTCA GTCAAGGAGC AGCAGAAAGG CAGTGTTGTG TGTGGTCATG 
GAAAGCATCC GAACCACACG GCAGTGCTCA CTGTCTGTGC ACGCTGGAAT TCGTGGGGAA 
GCCATGAGGT TTCATTTTAT GGATGAACAG AATCCCAAGG GAAGGGACAA AGCTATTGTT 
TTTCCAGCAC ATACAACCAT AGCTTTCAGT GTTTTTGAAC TCTTCATTTA CTTGGATGGT 
GCCTTTGACC TTTGTGTCAC TTCAGTGTCA AAAGGAGGAT TTGAAAGGGA AGAAACAGCA 
ACATTTGCAC TGCTCTACAG ATTGAGAAAT ATACTATTTG AAAGAAATAG AAGAGTGATG 
GATGCCATTT CTCGTTCACA GCTTTACTTA GATGATCTTT TTTCTGACTA TTATGACAAA 
CCTCTCAGCA TGAGTGATAT TTCACTCAAA GAAGGTACTC ACATCCGTGT TAACTTACTT 
AATCACAACA TTCCAAAAGG ACCTTGCATA CTCTGTGGAA TGGGGAACTT TAAAAGGGAG 
ACAGTTTACG GGTGTTTTCA GTGCTCTGTT GATGGGCAGA AGTACGTGCG ACTTCATGCA 
GTTCCTTGTT TTGATATTTG GCACAAGAGA ATGAAATAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OBa227579
Clone ID Related Accession (Same CDS sequence) XM_024978243.1
Accession Version XM_024978243.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 582bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-05-06
Organism Bos taurus(cattle)
Product pejvakin isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037329.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
ATGGAAAGCA TCCGAACCAC ACGGCAGTGC TCACTGTCTG TGCACGCTGG AATTCGTGGG 
GAAGCCATGA GGTTTCATTT TATGGATGAA CAGAATCCCA AGGGAAGGGA CAAAGCTATT 
GTTTTTCCAG CACATACAAC CATAGCTTTC AGTGTTTTTG AACTCTTCAT TTACTTGGAT 
GGTGCCTTTG ACCTTTGTGT CACTTCAGTG TCAAAAGGAG GATTTGAAAG GGAAGAAACA 
GCAACATTTG CACTGCTCTA CAGATTGAGA AATATACTAT TTGAAAGAAA TAGAAGAGTG 
ATGGATGCCA TTTCTCGTTC ACAGCTTTAC TTAGATGATC TTTTTTCTGA CTATTATGAC 
AAACCTCTCA GCATGAGTGA TATTTCACTC AAAGAAGGTA CTCACATCCG TGTTAACTTA 
CTTAATCACA ACATTCCAAA AGGACCTTGC ATACTCTGTG GAATGGGGAA CTTTAAAAGG 
GAGACAGTTT ACGGGTGTTT TCAGTGCTCT GTTGATGGGC AGAAGTACGT GCGACTTCAT 
GCAGTTCCTT GTTTTGATAT TTGGCACAAG AGAATGAAAT AA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_024834011.1
CDS376..957
Translation

Target ORF information:

RefSeq Version XM_024978243.1
Organism Bos taurus(cattle)
Definition Bos taurus pejvakin (PJVK), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_024978243.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
ATGGAAAGCA TCCGAACCAC ACGGCAGTGC TCACTGTCTG TGCACGCTGG AATTCGTGGG 
GAAGCCATGA GGTTTCATTT TATGGATGAA CAGAATCCCA AGGGAAGGGA CAAAGCTATT 
GTTTTTCCAG CACATACAAC CATAGCTTTC AGTGTTTTTG AACTCTTCAT TTACTTGGAT 
GGTGCCTTTG ACCTTTGTGT CACTTCAGTG TCAAAAGGAG GATTTGAAAG GGAAGAAACA 
GCAACATTTG CACTGCTCTA CAGATTGAGA AATATACTAT TTGAAAGAAA TAGAAGAGTG 
ATGGATGCCA TTTCTCGTTC ACAGCTTTAC TTAGATGATC TTTTTTCTGA CTATTATGAC 
AAACCTCTCA GCATGAGTGA TATTTCACTC AAAGAAGGTA CTCACATCCG TGTTAACTTA 
CTTAATCACA ACATTCCAAA AGGACCTTGC ATACTCTGTG GAATGGGGAA CTTTAAAAGG 
GAGACAGTTT ACGGGTGTTT TCAGTGCTCT GTTGATGGGC AGAAGTACGT GCGACTTCAT 
GCAGTTCCTT GTTTTGATAT TTGGCACAAG AGAATGAAAT AA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

A whole-genome assembly of the domestic cow, Bos taurus.
Genome biology10(4)R42(2009)
Zimin AV,Delcher AL,Florea L,Kelley DR,Schatz MC,Puiu D,Hanrahan F,Pertea G,Van Tassell CP,Sonstegard TS,Mar?ais G,Roberts M,Subramanian P,Yorke JA,Salzberg SL