Gene Symbol | KCTD1 |
Entrez Gene ID | 784587 |
Full Name | potassium channel tetramerization domain containing 1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » KCTD1 cDNA ORF clone
gRNAs
Gene Symbol | KCTD1 |
Entrez Gene ID | 784587 |
Full Name | potassium channel tetramerization domain containing 1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
XM_024984411.1 | XP_024840179.1 | BTB/POZ domain-containing protein KCTD1 isoform X3 |
NM_001080360.2 | NP_001073829.2 | BTB/POZ domain-containing protein KCTD1 |
XM_005224076.2 | XP_005224133.1 | BTB/POZ domain-containing protein KCTD1 isoform X1 |
XM_010818766.2 | XP_010817068.1 | BTB/POZ domain-containing protein KCTD1 isoform X2 |
XM_005224077.4 | XP_005224134.1 | BTB/POZ domain-containing protein KCTD1 isoform X4 |
NM_001080360.1 | NP_001073829.1 | BTB/POZ domain-containing protein KCTD1 |
XM_005224077.3 | XP_005224134.1 | BTB/POZ domain-containing protein KCTD1 isoform X3 |
XM_010818766.3 | XP_010817068.1 | BTB/POZ domain-containing protein KCTD1 isoform X2 |
XM_005224076.3 | XP_005224133.1 | BTB/POZ domain-containing protein KCTD1 isoform X1 |
Pan troglodytes (chimpanzee) | KCTD1 | XP_003339350.1 |
Canis lupus familiaris (dog) | KCTD1 | XP_003434972.1 |
Bos taurus (cattle) | KCTD1 | NP_001073829.1 |
Danio rerio (zebrafish) | kctd1 | XP_005160530.1 |
Mus musculus (house mouse) | Kctd1 | NP_001136203.1 |
Xenopus tropicalis (tropical clawed frog) | kctd1 | XP_004915264.1 |
Homo sapiens (human) | KCTD1 | NP_001136202.1 |
Rattus norvegicus (Norway rat) | Kctd1 | NP_001093986.1 |
Gallus gallus (chicken) | LOC101748669 | XP_004939867.1 |
PrPC interacts with potassium channel tetramerization domain containing 1 (KCTD1) protein through the PrP(51-136) region containing octapeptide repeats.
Huang T, Xu J, Xiang J, Lu Y, Chen R, Huang L, Xiao G, Sun G
Biochemical and biophysical research communications417(1)182-6(2012 Jan)
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
these results identify a novel PrP(C)-interacting protein KCTD1 and suggest a new approach to investigating the unidentified physiological cellular function of PrP(C).
Title: PrPC interacts with potassium channel tetramerization domain containing 1 (KCTD1) protein through the PrP(51-136) region containing octapeptide repeats.
The following KCTD1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the KCTD1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa32468 | |
Clone ID Related Accession (Same CDS sequence) | XM_005224077.4 , NM_001080360.1 , XM_005224077.3 | |
Accession Version | NM_001080360.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 774bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-16 | |
Organism | Bos taurus(cattle) | |
Product | BTB/POZ domain-containing protein KCTD1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC113314.1. On Jan 16, 2007 this sequence version replaced XM_001252858.1. ##Evidence-Data-START## Transcript exon combination :: BC113314.1, EH183242.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145412, SAMN03145413 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTCAAGAC CTCTGATCAC TAGATCTCCT GCATCTCCAC TGAACAATCA AGGCATTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001073829.1 |
CDS | 81..854 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTCAAGAC CTCTGATCAC TAGATCTCCT GCATCTCCAC TGAACAATCA AGGCATTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa32468 | |
Clone ID Related Accession (Same CDS sequence) | XM_005224077.4 , NM_001080360.1 , XM_005224077.3 | |
Accession Version | XM_005224077.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 774bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | BTB/POZ domain-containing protein KCTD1 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037351.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005224077.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCAAGAC CTCTGATCAC TAGATCTCCT GCATCTCCAC TGAACAATCA AGGCATTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005224134.1 |
CDS | 581..1354 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTCAAGAC CTCTGATCAC TAGATCTCCT GCATCTCCAC TGAACAATCA AGGCATTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa32468 | |
Clone ID Related Accession (Same CDS sequence) | XM_005224077.4 , NM_001080360.1 , XM_005224077.3 | |
Accession Version | XM_005224077.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 774bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | BTB/POZ domain-containing protein KCTD1 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104567.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005224077.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCAAGAC CTCTGATCAC TAGATCTCCT GCATCTCCAC TGAACAATCA AGGCATTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005224134.1 |
CDS | 581..1354 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTCAAGAC CTCTGATCAC TAGATCTCCT GCATCTCCAC TGAACAATCA AGGCATTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa57560 | |
Clone ID Related Accession (Same CDS sequence) | XM_010818766.2 , XM_010818766.3 | |
Accession Version | XM_010818766.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 873bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | BTB/POZ domain-containing protein KCTD1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104567.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_010818766.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGGAGTT TCAGAAGAAA CGTGCATTCC CAGTCTTGCC TGGACATGTG GTTAATGCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_010817068.1 |
CDS | 909..1781 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCGGAGTT TCAGAAGAAA CGTGCATTCC CAGTCTTGCC TGGACATGTG GTTAATGCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa57560 | |
Clone ID Related Accession (Same CDS sequence) | XM_010818766.2 , XM_010818766.3 | |
Accession Version | XM_010818766.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 873bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | BTB/POZ domain-containing protein KCTD1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037351.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_010818766.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGGAGTT TCAGAAGAAA CGTGCATTCC CAGTCTTGCC TGGACATGTG GTTAATGCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_010817068.1 |
CDS | 183..1055 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCGGAGTT TCAGAAGAAA CGTGCATTCC CAGTCTTGCC TGGACATGTG GTTAATGCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa230000 | |
Clone ID Related Accession (Same CDS sequence) | XM_024984411.1 | |
Accession Version | XM_024984411.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 798bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | BTB/POZ domain-containing protein KCTD1 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037351.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTTCAGG ACAGTCGGCC CAATATGTCA AGACCTCTGA TCACTAGATC TCCTGCATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024840179.1 |
CDS | 288..1085 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTTTCAGG ACAGTCGGCC CAATATGTCA AGACCTCTGA TCACTAGATC TCCTGCATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa32467 | |
Clone ID Related Accession (Same CDS sequence) | NM_001080360.2 , XM_005224076.2 , XM_005224076.3 | |
Accession Version | NM_001080360.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2586bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2020-01-04 | |
Organism | Bos taurus(cattle) | |
Product | BTB/POZ domain-containing protein KCTD1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from NKLS02000024.1. On or before Aug 5, 2019 this sequence version replaced XM_005224076.3, NM_001080360.1. ##Evidence-Data-START## Transcript exon combination :: BC113314.1, GGVA01100889.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145412, SAMN03145413 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCGAGAA TGCCTGGCAG CGGGGACTGT AACACCAGCG CGGGCGGCAG CGCCGCCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001073829.2 |
CDS | 269..2854 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCGAGAA TGCCTGGCAG CGGGGACTGT AACACCAGCG CGGGCGGCAG CGCCGCCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa32467 | |
Clone ID Related Accession (Same CDS sequence) | NM_001080360.2 , XM_005224076.2 , XM_005224076.3 | |
Accession Version | XM_005224076.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2586bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | BTB/POZ domain-containing protein KCTD1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104567.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005224076.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGAGAA TGCCTGGCAG CGGGGACTGT AACACCAGCG CGGGCGGCAG CGCCGCCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005224133.1 |
CDS | 282..2867 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCGAGAA TGCCTGGCAG CGGGGACTGT AACACCAGCG CGGGCGGCAG CGCCGCCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa32467 | |
Clone ID Related Accession (Same CDS sequence) | NM_001080360.2 , XM_005224076.2 , XM_005224076.3 | |
Accession Version | XM_005224076.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2586bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | BTB/POZ domain-containing protein KCTD1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037351.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005224076.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGAGAA TGCCTGGCAG CGGGGACTGT AACACCAGCG CGGGCGGCAG CGCCGCCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005224133.1 |
CDS | 269..2854 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCGAGAA TGCCTGGCAG CGGGGACTGT AACACCAGCG CGGGCGGCAG CGCCGCCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
PrPC interacts with potassium channel tetramerization domain containing 1 (KCTD1) protein through the PrP(51-136) region containing octapeptide repeats. |
A whole-genome assembly of the domestic cow, Bos taurus. |