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smd-1 cDNA ORF clone, Caenorhabditis elegans

Summary

Gene Symbol smd-1
Entrez Gene ID 173269
Full Name S-adenosylmethionine decarboxylase beta chain
Gene Type protein-coding
Organism Caenorhabditis elegans

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_061047.6 NP_493448.1 S-adenosylmethionine decarboxylase beta chain
NM_061047.5 NP_493448.1 S-adenosylmethionine decarboxylase beta chain

Pathways from BioSystems


Homologies


Mus musculus (house mouse) Amd2 NP_031470.3
Rattus norvegicus (Norway rat) Amd1 NP_112273.2
Danio rerio (zebrafish) amd1 NP_001155073.1
Drosophila melanogaster (fruit fly) SamDC NP_477223.2
Oryza sativa (rice) Os04g0498600 NP_001053213.1
Homo sapiens (human) AMD1 NP_001625.2
Gallus gallus (chicken) AMD1 NP_001012587.1
Schizosaccharomyces pombe (fission yeast) spe2 NP_596179.1
Neurospora crassa NCU01083 XP_961695.1
Arabidopsis thaliana (thale cress) AT5G15950 NP_001031888.1
Arabidopsis thaliana (thale cress) SAMDC NP_186896.1
Pan troglodytes (chimpanzee) AMD1 XP_001155870.1
Anopheles gambiae (African malaria mosquito) AgaP_AGAP009619 XP_318648.4
Saccharomyces cerevisiae (baker's yeast) SPE2 NP_014590.1
Canis lupus familiaris (dog) AMD1 XP_539081.2
Bos taurus (cattle) AMD1 NP_776415.1
Mus musculus (house mouse) Amd1 NP_033795.1
Kluyveromyces lactis KLLA0C14410g XP_452845.1
Eremothecium gossypii AGOS_ABL061C NP_982886.1
Magnaporthe oryzae (rice blast fungus) MGG_14297 XP_003710731.1
Arabidopsis thaliana (thale cress) AT3G25570 NP_189184.1
Oryza sativa (rice) Os09g0424300 NP_001063217.1
Xenopus tropicalis (tropical clawed frog) amd1 NP_001017143.1
Caenorhabditis elegans (roundworm) smd-1 NP_493448.1
Oryza sativa (rice) Os02g0611200 NP_001047404.1

Gene Ontology


Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following smd-1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the smd-1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OCa335988 NM_061047.6
Latest version!		 Caenorhabditis elegans S-adenosylmethionine decarboxylase beta chain (smd-1), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
View Old Accession Versions >>
OCa335988 NM_061047.5 Caenorhabditis elegans S-adenosylmethionine decarboxylase beta chain (smd-1), partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $258.30
$369.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OCa335988
Clone ID Related Accession (Same CDS sequence) NM_061047.6 , NM_061047.5
Accession Version NM_061047.6 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1107bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-10-17
Organism Caenorhabditis elegans
Product S-adenosylmethionine decarboxylase beta chain
Comment Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003279). On Sep 4, 2019 this sequence version replaced NM_061047.5. 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
ATGTCTGCCA CGTCTGCCAC CAACTTTGCC GTTCAAACCC ATCCGGTCAA GGCTCCGGAT 
GAGGAGTACT TCTTCGAAGG TGCCGAGAAG CTTCTGGAGC TCTGGTTCTG CTCGAGCACA 
CAGAATGAGA CTCGCTCCCT CCGAATCATC CCAAGAGAGG AGATCGATGC AATGCTTGAC 
ATCGCTCGCT GTAAGATCCT CCACTCCAAG CACAACGAGT CCATCGACTC TTACGTGCTC 
AGCGAGTCCT CTCTGTTCAT CTCGGACAAC CGTGTGATCC TCAAGACCTG TGGCACAACT 
CGCTTGCTGG CTGCCCTTCC AGTGATCATG CAGCTAGCCG GGGCCTACGC CGGGCTGGAT 
CAAGTCCAAT CCGTCTACTA CTCCAGGAAG AACTTCTTGC GCCCGGATCT TCAACCATCG 
CTTCATAAGA ACTTTGATGC GGAGGTGGAG TATCTGGATA GTTTTTTTGT GGATGGTCAT 
GCGTACTGTC TTGGATCCCT CAAACAGGAT AGATGGTACC TTTACACATT CCACAGAGAA 
GTTGAGTTCC CAGCTCACAA GCAACCCGAT CACACCTTGG AGATCTTGAT GAGCGATCTG 
GATGAGGAGG TGCTCCACAA GTTTACCAAA GACTATGCGG TGGATGGCAA TGACTGCTTC 
ATGCGAGCCG GTATTGACAA GATCATCCCG GCAGGTGCAG ATGTTCACGA CGAGCTGTTC 
GACCCGTGCG GCTACAGTAT GAACGCTTAT ATGAATGACA CTGACCAATA CGCAACCATC 
CACGTGACTC CCGAGAAGGC ATTCAGCTTC GCTTCCTTCG AGACCAACCA GGACTTGGTC 
TGCCTGTACT CGCAGACTCG GAAGGTTCTT CAGTGTTTCA GACCAAATAA GATCTTGATG 
ACAGTCTTTG CCAATGACAT TTCGGAGAAG GGGAAGGATG CCCAGCAGCA GTTGTGGGAC 
CGCGAGCTGC CGGGGTATAG AAGGACCAAT GTGCAGTTTG TGAGACTTGA GACGGAAACC 
CTAGTCTACG CTCATTTCGT GCGCAAGGCC TCCACCGGTC AAGATTCATC ATCGAGCGAC 
GAGGACGACG GCGAACGCTC CGATTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_493448.1
CDS455..1561
Translation

Target ORF information:

RefSeq Version NM_061047.6
Organism Caenorhabditis elegans
Definition Caenorhabditis elegans S-adenosylmethionine decarboxylase beta chain (smd-1), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_061047.6

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
ATGTCTGCCA CGTCTGCCAC CAACTTTGCC GTTCAAACCC ATCCGGTCAA GGCTCCGGAT 
GAGGAGTACT TCTTCGAAGG TGCCGAGAAG CTTCTGGAGC TCTGGTTCTG CTCGAGCACA 
CAGAATGAGA CTCGCTCCCT CCGAATCATC CCAAGAGAGG AGATCGATGC AATGCTTGAC 
ATCGCTCGCT GTAAGATCCT CCACTCCAAG CACAACGAGT CCATCGACTC TTACGTGCTC 
AGCGAGTCCT CTCTGTTCAT CTCGGACAAC CGTGTGATCC TCAAGACCTG TGGCACAACT 
CGCTTGCTGG CTGCCCTTCC AGTGATCATG CAGCTAGCCG GGGCCTACGC CGGGCTGGAT 
CAAGTCCAAT CCGTCTACTA CTCCAGGAAG AACTTCTTGC GCCCGGATCT TCAACCATCG 
CTTCATAAGA ACTTTGATGC GGAGGTGGAG TATCTGGATA GTTTTTTTGT GGATGGTCAT 
GCGTACTGTC TTGGATCCCT CAAACAGGAT AGATGGTACC TTTACACATT CCACAGAGAA 
GTTGAGTTCC CAGCTCACAA GCAACCCGAT CACACCTTGG AGATCTTGAT GAGCGATCTG 
GATGAGGAGG TGCTCCACAA GTTTACCAAA GACTATGCGG TGGATGGCAA TGACTGCTTC 
ATGCGAGCCG GTATTGACAA GATCATCCCG GCAGGTGCAG ATGTTCACGA CGAGCTGTTC 
GACCCGTGCG GCTACAGTAT GAACGCTTAT ATGAATGACA CTGACCAATA CGCAACCATC 
CACGTGACTC CCGAGAAGGC ATTCAGCTTC GCTTCCTTCG AGACCAACCA GGACTTGGTC 
TGCCTGTACT CGCAGACTCG GAAGGTTCTT CAGTGTTTCA GACCAAATAA GATCTTGATG 
ACAGTCTTTG CCAATGACAT TTCGGAGAAG GGGAAGGATG CCCAGCAGCA GTTGTGGGAC 
CGCGAGCTGC CGGGGTATAG AAGGACCAAT GTGCAGTTTG TGAGACTTGA GACGGAAACC 
CTAGTCTACG CTCATTTCGT GCGCAAGGCC TCCACCGGTC AAGATTCATC ATCGAGCGAC 
GAGGACGACG GCGAACGCTC CGATTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OCa335988
Clone ID Related Accession (Same CDS sequence) NM_061047.6 , NM_061047.5
Accession Version NM_061047.5 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1107bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-04-08
Organism Caenorhabditis elegans
Product S-adenosylmethionine decarboxylase beta chain
Comment Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003279). On Jun 26, 2012 this sequence version replaced NM_061047.4. COMPLETENESS: incomplete on both ends. 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
ATGTCTGCCA CGTCTGCCAC CAACTTTGCC GTTCAAACCC ATCCGGTCAA GGCTCCGGAT 
GAGGAGTACT TCTTCGAAGG TGCCGAGAAG CTTCTGGAGC TCTGGTTCTG CTCGAGCACA 
CAGAATGAGA CTCGCTCCCT CCGAATCATC CCAAGAGAGG AGATCGATGC AATGCTTGAC 
ATCGCTCGCT GTAAGATCCT CCACTCCAAG CACAACGAGT CCATCGACTC TTACGTGCTC 
AGCGAGTCCT CTCTGTTCAT CTCGGACAAC CGTGTGATCC TCAAGACCTG TGGCACAACT 
CGCTTGCTGG CTGCCCTTCC AGTGATCATG CAGCTAGCCG GGGCCTACGC CGGGCTGGAT 
CAAGTCCAAT CCGTCTACTA CTCCAGGAAG AACTTCTTGC GCCCGGATCT TCAACCATCG 
CTTCATAAGA ACTTTGATGC GGAGGTGGAG TATCTGGATA GTTTTTTTGT GGATGGTCAT 
GCGTACTGTC TTGGATCCCT CAAACAGGAT AGATGGTACC TTTACACATT CCACAGAGAA 
GTTGAGTTCC CAGCTCACAA GCAACCCGAT CACACCTTGG AGATCTTGAT GAGCGATCTG 
GATGAGGAGG TGCTCCACAA GTTTACCAAA GACTATGCGG TGGATGGCAA TGACTGCTTC 
ATGCGAGCCG GTATTGACAA GATCATCCCG GCAGGTGCAG ATGTTCACGA CGAGCTGTTC 
GACCCGTGCG GCTACAGTAT GAACGCTTAT ATGAATGACA CTGACCAATA CGCAACCATC 
CACGTGACTC CCGAGAAGGC ATTCAGCTTC GCTTCCTTCG AGACCAACCA GGACTTGGTC 
TGCCTGTACT CGCAGACTCG GAAGGTTCTT CAGTGTTTCA GACCAAATAA GATCTTGATG 
ACAGTCTTTG CCAATGACAT TTCGGAGAAG GGGAAGGATG CCCAGCAGCA GTTGTGGGAC 
CGCGAGCTGC CGGGGTATAG AAGGACCAAT GTGCAGTTTG TGAGACTTGA GACGGAAACC 
CTAGTCTACG CTCATTTCGT GCGCAAGGCC TCCACCGGTC AAGATTCATC ATCGAGCGAC 
GAGGACGACG GCGAACGCTC CGATTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_493448.1
CDS1..1107
Translation

Target ORF information:

RefSeq Version NM_061047.5
Organism Caenorhabditis elegans
Definition Caenorhabditis elegans S-adenosylmethionine decarboxylase beta chain (smd-1), partial mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_061047.5

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
ATGTCTGCCA CGTCTGCCAC CAACTTTGCC GTTCAAACCC ATCCGGTCAA GGCTCCGGAT 
GAGGAGTACT TCTTCGAAGG TGCCGAGAAG CTTCTGGAGC TCTGGTTCTG CTCGAGCACA 
CAGAATGAGA CTCGCTCCCT CCGAATCATC CCAAGAGAGG AGATCGATGC AATGCTTGAC 
ATCGCTCGCT GTAAGATCCT CCACTCCAAG CACAACGAGT CCATCGACTC TTACGTGCTC 
AGCGAGTCCT CTCTGTTCAT CTCGGACAAC CGTGTGATCC TCAAGACCTG TGGCACAACT 
CGCTTGCTGG CTGCCCTTCC AGTGATCATG CAGCTAGCCG GGGCCTACGC CGGGCTGGAT 
CAAGTCCAAT CCGTCTACTA CTCCAGGAAG AACTTCTTGC GCCCGGATCT TCAACCATCG 
CTTCATAAGA ACTTTGATGC GGAGGTGGAG TATCTGGATA GTTTTTTTGT GGATGGTCAT 
GCGTACTGTC TTGGATCCCT CAAACAGGAT AGATGGTACC TTTACACATT CCACAGAGAA 
GTTGAGTTCC CAGCTCACAA GCAACCCGAT CACACCTTGG AGATCTTGAT GAGCGATCTG 
GATGAGGAGG TGCTCCACAA GTTTACCAAA GACTATGCGG TGGATGGCAA TGACTGCTTC 
ATGCGAGCCG GTATTGACAA GATCATCCCG GCAGGTGCAG ATGTTCACGA CGAGCTGTTC 
GACCCGTGCG GCTACAGTAT GAACGCTTAT ATGAATGACA CTGACCAATA CGCAACCATC 
CACGTGACTC CCGAGAAGGC ATTCAGCTTC GCTTCCTTCG AGACCAACCA GGACTTGGTC 
TGCCTGTACT CGCAGACTCG GAAGGTTCTT CAGTGTTTCA GACCAAATAA GATCTTGATG 
ACAGTCTTTG CCAATGACAT TTCGGAGAAG GGGAAGGATG CCCAGCAGCA GTTGTGGGAC 
CGCGAGCTGC CGGGGTATAG AAGGACCAAT GTGCAGTTTG TGAGACTTGA GACGGAAACC 
CTAGTCTACG CTCATTTCGT GCGCAAGGCC TCCACCGGTC AAGATTCATC ATCGAGCGAC 
GAGGACGACG GCGAACGCTC CGATTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Genome sequence of the nematode C. elegans: a platform for investigating biology.
Science (New York, N.Y.)282(5396)2012-8(1998 Dec)