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vps-2 cDNA ORF clone, Caenorhabditis elegans

Summary

Gene Symbol vps-2
Entrez Gene ID 174908
Full Name related to yeast Vacuolar Protein Sorting factor
Gene Type protein-coding
Organism Caenorhabditis elegans

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_064316.4 NP_496717.1 related to yeast Vacuolar Protein Sorting factor
NM_064316.5 NP_496717.1 related to yeast Vacuolar Protein Sorting factor

Pathways from BioSystems


Homologies


Xenopus tropicalis (tropical clawed frog) chmp2a NP_001005008.1
Homo sapiens (human) CHMP2A NP_940818.1
Canis lupus familiaris (dog) CHMP2A XP_850536.1
Anopheles gambiae (African malaria mosquito) AgaP_AGAP001285 XP_321862.3
Caenorhabditis elegans (roundworm) vps-2 NP_496717.1
Schizosaccharomyces pombe (fission yeast) did4 NP_593871.3
Oryza sativa (rice) Os07g0236800 NP_001059248.1
Bos taurus (cattle) CHMP2A NP_001029722.1
Mus musculus (house mouse) Chmp2a NP_081161.1
Rattus norvegicus (Norway rat) Chmp2a NP_001102376.1
Danio rerio (zebrafish) bc2 NP_998682.1
Neurospora crassa NCU00435 XP_956699.1
Pan troglodytes (chimpanzee) CHMP2A XP_003316813.1
CHMP2A XP_001099219.1
Gallus gallus (chicken) CHMP2A NP_001074361.1
Drosophila melanogaster (fruit fly) vps2 NP_651455.1
Magnaporthe oryzae (rice blast fungus) MGG_05208 XP_003712753.1
Saccharomyces cerevisiae (baker's yeast) DID4 NP_012924.2
Kluyveromyces lactis KLLA0B13343g XP_452125.1
Eremothecium gossypii AGOS_ABR002C NP_982948.1
Arabidopsis thaliana (thale cress) VPS2.1 NP_565336.1

Gene Ontology


Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following vps-2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the vps-2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OCa338298 NM_064316.5
Latest version!		 Caenorhabditis elegans related to yeast Vacuolar Protein Sorting factor (vps-2), partial mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $139.30
$199.00
View Old Accession Versions >>
OCa338298 NM_064316.4 Caenorhabditis elegans related to yeast Vacuolar Protein Sorting factor (vps-2), partial mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $174.30
$249.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OCa338298
Clone ID Related Accession (Same CDS sequence) NM_064316.4 , NM_064316.5
Accession Version NM_064316.4 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 714bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-04-08
Organism Caenorhabditis elegans
Product related to yeast Vacuolar Protein Sorting factor
Comment Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003280). On Jun 26, 2012 this sequence version replaced NM_064316.3. COMPLETENESS: incomplete on both ends. 

1
61
121
181
241
301
361
421
481
541
601
661
ATGGATTTCC TGTTCGGACG CCGCAAGACG CCAGCCGAGC TTCTTCGACA GAATCAGAGG 
GCTCTGAACA AGGCCATCCG AGAGCTGGAC CGCGAGAGAG CTCGTATGGA GGCTCAGGAG 
AAGAAGGTTA TCGCGGATAT CAAGAATATG GCAAAGAAGA ATCAAATGGA CTCTGTAAAA 
GTGATGGCCA AGGATCTGGT GCGAACTCGT CGTTATATCA AGAAATTTAT CGTTATGAAG 
GCAAATATTC AGGCGGTCTC CCTGAAAGTT CAAACCCTGA AATCGCAAGA TGCGATGGCG 
TCGGCGATGA AAGGAGTGAC AAAAGCGATG CAATCGATGA ATCGGCAGCT GAATCTTCCA 
CAAATCCAGA AAATTATGAT GGAATTCGAG AAACAGAGCG AAATCATGGA TATGAAGGAG 
GAGGTGATGG GCGACGCGAT CGATGATGCT CTTGGAGACG CCGGCGATGA GGAGGAGACC 
GATCAGATCG TTAATCAGGT TCTCGACGAG TTAGGCATAC AAATGGGCGA AGAAATGGCC 
GGGCTCCCGT CGGCGGCCGG TGGACTCAAT GCTGGTGGAG AACGGATCGG CGGTCGCCAA 
GCTGTTGCAG CTGGAGGTAG CGGTGGAGCT CATCATGGAG CCGGTGGAGC CGGTGGTGGA 
AATGATGTTG ACGATGATCT TCAGGCCCGT CTTGATCAGC TTAGAAGAGA ATGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_496717.1
CDS1..714
Translation

Target ORF information:

RefSeq Version NM_064316.4
Organism Caenorhabditis elegans
Definition Caenorhabditis elegans related to yeast Vacuolar Protein Sorting factor (vps-2), partial mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_064316.4

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
ATGGATTTCC TGTTCGGACG CCGCAAGACG CCAGCCGAGC TTCTTCGACA GAATCAGAGG 
GCTCTGAACA AGGCCATCCG AGAGCTGGAC CGCGAGAGAG CTCGTATGGA GGCTCAGGAG 
AAGAAGGTTA TCGCGGATAT CAAGAATATG GCAAAGAAGA ATCAAATGGA CTCTGTAAAA 
GTGATGGCCA AGGATCTGGT GCGAACTCGT CGTTATATCA AGAAATTTAT CGTTATGAAG 
GCAAATATTC AGGCGGTCTC CCTGAAAGTT CAAACCCTGA AATCGCAAGA TGCGATGGCG 
TCGGCGATGA AAGGAGTGAC AAAAGCGATG CAATCGATGA ATCGGCAGCT GAATCTTCCA 
CAAATCCAGA AAATTATGAT GGAATTCGAG AAACAGAGCG AAATCATGGA TATGAAGGAG 
GAGGTGATGG GCGACGCGAT CGATGATGCT CTTGGAGACG CCGGCGATGA GGAGGAGACC 
GATCAGATCG TTAATCAGGT TCTCGACGAG TTAGGCATAC AAATGGGCGA AGAAATGGCC 
GGGCTCCCGT CGGCGGCCGG TGGACTCAAT GCTGGTGGAG AACGGATCGG CGGTCGCCAA 
GCTGTTGCAG CTGGAGGTAG CGGTGGAGCT CATCATGGAG CCGGTGGAGC CGGTGGTGGA 
AATGATGTTG ACGATGATCT TCAGGCCCGT CTTGATCAGC TTAGAAGAGA ATGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OCa338298
Clone ID Related Accession (Same CDS sequence) NM_064316.4 , NM_064316.5
Accession Version NM_064316.5 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 714bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-10-17
Organism Caenorhabditis elegans
Product related to yeast Vacuolar Protein Sorting factor
Comment Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003280). On Sep 4, 2019 this sequence version replaced NM_064316.4. COMPLETENESS: incomplete on the 5' end. 

1
61
121
181
241
301
361
421
481
541
601
661
ATGGATTTCC TGTTCGGACG CCGCAAGACG CCAGCCGAGC TTCTTCGACA GAATCAGAGG 
GCTCTGAACA AGGCCATCCG AGAGCTGGAC CGCGAGAGAG CTCGTATGGA GGCTCAGGAG 
AAGAAGGTTA TCGCGGATAT CAAGAATATG GCAAAGAAGA ATCAAATGGA CTCTGTAAAA 
GTGATGGCCA AGGATCTGGT GCGAACTCGT CGTTATATCA AGAAATTTAT CGTTATGAAG 
GCAAATATTC AGGCGGTCTC CCTGAAAGTT CAAACCCTGA AATCGCAAGA TGCGATGGCG 
TCGGCGATGA AAGGAGTGAC AAAAGCGATG CAATCGATGA ATCGGCAGCT GAATCTTCCA 
CAAATCCAGA AAATTATGAT GGAATTCGAG AAACAGAGCG AAATCATGGA TATGAAGGAG 
GAGGTGATGG GCGACGCGAT CGATGATGCT CTTGGAGACG CCGGCGATGA GGAGGAGACC 
GATCAGATCG TTAATCAGGT TCTCGACGAG TTAGGCATAC AAATGGGCGA AGAAATGGCC 
GGGCTCCCGT CGGCGGCCGG TGGACTCAAT GCTGGTGGAG AACGGATCGG CGGTCGCCAA 
GCTGTTGCAG CTGGAGGTAG CGGTGGAGCT CATCATGGAG CCGGTGGAGC CGGTGGTGGA 
AATGATGTTG ACGATGATCT TCAGGCCCGT CTTGATCAGC TTAGAAGAGA ATGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_496717.1
CDS1..714
Translation

Target ORF information:

RefSeq Version NM_064316.5
Organism Caenorhabditis elegans
Definition Caenorhabditis elegans related to yeast Vacuolar Protein Sorting factor (vps-2), partial mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_064316.5

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
ATGGATTTCC TGTTCGGACG CCGCAAGACG CCAGCCGAGC TTCTTCGACA GAATCAGAGG 
GCTCTGAACA AGGCCATCCG AGAGCTGGAC CGCGAGAGAG CTCGTATGGA GGCTCAGGAG 
AAGAAGGTTA TCGCGGATAT CAAGAATATG GCAAAGAAGA ATCAAATGGA CTCTGTAAAA 
GTGATGGCCA AGGATCTGGT GCGAACTCGT CGTTATATCA AGAAATTTAT CGTTATGAAG 
GCAAATATTC AGGCGGTCTC CCTGAAAGTT CAAACCCTGA AATCGCAAGA TGCGATGGCG 
TCGGCGATGA AAGGAGTGAC AAAAGCGATG CAATCGATGA ATCGGCAGCT GAATCTTCCA 
CAAATCCAGA AAATTATGAT GGAATTCGAG AAACAGAGCG AAATCATGGA TATGAAGGAG 
GAGGTGATGG GCGACGCGAT CGATGATGCT CTTGGAGACG CCGGCGATGA GGAGGAGACC 
GATCAGATCG TTAATCAGGT TCTCGACGAG TTAGGCATAC AAATGGGCGA AGAAATGGCC 
GGGCTCCCGT CGGCGGCCGG TGGACTCAAT GCTGGTGGAG AACGGATCGG CGGTCGCCAA 
GCTGTTGCAG CTGGAGGTAG CGGTGGAGCT CATCATGGAG CCGGTGGAGC CGGTGGTGGA 
AATGATGTTG ACGATGATCT TCAGGCCCGT CTTGATCAGC TTAGAAGAGA ATGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Genome sequence of the nematode C. elegans: a platform for investigating biology.
Science (New York, N.Y.)282(5396)2012-8(1998 Dec)