SSX2IP cDNA ORF clone, Calidris pugnax(ruff)

The following SSX2IP gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SSX2IP cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OCa63257 XM_014939534.1
Latest version!
Calidris pugnax synovial sarcoma, X breakpoint 2 interacting protein (SSX2IP), transcript variant X3, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $342.30
$489.00
OCa63257 XM_014939535.1
Latest version!
Calidris pugnax synovial sarcoma, X breakpoint 2 interacting protein (SSX2IP), transcript variant X4, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $342.30
$489.00
OCa63257 XM_014939532.1
Latest version!
Calidris pugnax synovial sarcoma, X breakpoint 2 interacting protein (SSX2IP), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $342.30
$489.00
OCa63257 XM_014939533.1
Latest version!
Calidris pugnax synovial sarcoma, X breakpoint 2 interacting protein (SSX2IP), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $342.30
$489.00
OCa63258 XM_014939536.1
Latest version!
Calidris pugnax synovial sarcoma, X breakpoint 2 interacting protein (SSX2IP), transcript variant X5, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $342.30
$489.00
OCa63259 XM_014939538.1
Latest version!
Calidris pugnax synovial sarcoma, X breakpoint 2 interacting protein (SSX2IP), transcript variant X6, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $342.30
$489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OCa63257
    Clone ID Related Accession (Same CDS sequence) XM_014939533.1 , XM_014939532.1 , XM_014939534.1 , XM_014939535.1
    Accession Version XM_014939533.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1683bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2015-12-08
    Organism Calidris pugnax(ruff)
    Product afadin- and alpha-actinin-binding protein isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015090812.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Calidris pugnax Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGGAGATT GGAAGACTAT TACTGTGCCA GTGCTGTCAT CAGATAGCAA AAATATTTTT 
    GAATATACCT CAGAAAAAAA GATATCTGCC CCAAGCATGA ACTCACAAGT GCTACGTTTG
    CCACTGCCTT CATCCAAAAA CATGCACAGC TTTTTCAGTG CCTTCTGCAC AGAAGAGAAT
    ATTGAACAGA GCATATCCTA TCTCGATAGG GAATTGACAA CGTTGGGCTT TCCTTCTATC
    TATATGGAGT CCAGAGAAAA AGAATTAAAC TTAATATCTA TCATAAATTG CATGAATGAA
    TTGCTTCTAC GGCAGCACAA GAACCTTCGA GCTCAGGAAG AAGTAGAAAT GCAGCATCTG
    AAACTGAGTA GTGATATGGA CCACTTACAG AACTGCTATG CTAAATTAAA GGAACAGTTG
    GAATTATCTA AAAGGGAAAT AGTTGGACTT CAGGAAAGAG ACAGACAACT GCAAAGCAAG
    AACAGAAATT TGCACCAGTT ACTTAAAAAT GAAAAGGATG AAGTACAAAA GTTACAGAAC
    ATAATTTCAA GTAGAGCTAC GCAGTACAAT CATGATATGA AGAGGAAAGA GAGAGAATAC
    AACAAATTAA AGGAACGCTT ACATCAATTA GTCATGAACA AAAAGGACAA AAAGATAGCT
    ATGGAAGTTC TAAATTATGT TGGTAGAGCT GATGGGAAGA GAGGTGCATG GAGGACTGAT
    AAGACAGAAG CCAGAAATGA AGAAGAAATG TACAAAGCTC TGTTAAGTGA TTATGAACAA
    CGCCAAAAAC AGCTTTTAGT GGAAAATGCT GAGCTGAAAA AAGTTCTTCA GCAAATGAAG
    AAAGAGATTA TTTCACTTCT GCCACCGCAG AAACAGAAAC CTAAAGAAAG GTCTGAAGAT
    GGGCCAGTGC TGTCAGACCT GGAGGAAGAC ATCGGAGAGT TAAATAAGGA GAATATGTGG
    GAACTGTCTT GTGAAACCGT TCGAGAGCAG CTTACCAACA GCATTAGAAA ACAATGGAGA
    ATGTTGAAAA ATCATGTTGA GAAGCTGGAT AACCAGGTGT CACGTGTACA TTCAGGAGCT
    TTGAATGAAA AAGATGTCAT TTCAAGAGAA GACCACGAGC TGCAAACTGA AAAGCTAGAG
    TTAGAGATTC AGCAGTGTAA AGAGATGATC AAAACTCAAC AACAGCTCTT ACAGCAACAG
    CTTATGTCTC CGTGTGACGA TGACACAACT CTGTTACTAC AGGACTGCTA TTTGTTGGAA
    GAAAGAGAGC GTCTTCAGGA GGAATGGACA CTATTTCGAG AACAAAAAAA GAATTTTGAG
    AAGGAACGAA GAAGTTTTAC AGAAGCTGCT ATTAGATTAG GACTTGAGAG AAAGGCATTT
    GAAGAAGATA GAGGAGCATG GCTGAAGCAA CAGTTCTTAA GTATGTCTAC TGATTACAAG
    CACTCTGAAA ATGTGACAAC TCCAAGTGCC TTCTTAGGAA GTTCTGACCA AGACAATCGG
    TTAGTGAAAT CTACATCTCA GCAAAGAAAA CCTCATTGTA CGTTGAGTGG TCCTGTTTCA
    GCAGAACCTT GTCAGACACC TCAGTATATT ATACATAACA GTTCCAGCGC TGCATCGAAA
    AAGCCCGCAG GAGATAGCAA GCCAAATCAG TGGGTGGAAA GTGACAAAGA GGAAACCCAG
    TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_014795019.1
    CDS522..2204
    Translation

    Target ORF information:

    RefSeq Version XM_014939533.1
    Organism Calidris pugnax(ruff)
    Definition Calidris pugnax synovial sarcoma, X breakpoint 2 interacting protein (SSX2IP), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_014939533.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGGAGATT GGAAGACTAT TACTGTGCCA GTGCTGTCAT CAGATAGCAA AAATATTTTT 
    GAATATACCT CAGAAAAAAA GATATCTGCC CCAAGCATGA ACTCACAAGT GCTACGTTTG
    CCACTGCCTT CATCCAAAAA CATGCACAGC TTTTTCAGTG CCTTCTGCAC AGAAGAGAAT
    ATTGAACAGA GCATATCCTA TCTCGATAGG GAATTGACAA CGTTGGGCTT TCCTTCTATC
    TATATGGAGT CCAGAGAAAA AGAATTAAAC TTAATATCTA TCATAAATTG CATGAATGAA
    TTGCTTCTAC GGCAGCACAA GAACCTTCGA GCTCAGGAAG AAGTAGAAAT GCAGCATCTG
    AAACTGAGTA GTGATATGGA CCACTTACAG AACTGCTATG CTAAATTAAA GGAACAGTTG
    GAATTATCTA AAAGGGAAAT AGTTGGACTT CAGGAAAGAG ACAGACAACT GCAAAGCAAG
    AACAGAAATT TGCACCAGTT ACTTAAAAAT GAAAAGGATG AAGTACAAAA GTTACAGAAC
    ATAATTTCAA GTAGAGCTAC GCAGTACAAT CATGATATGA AGAGGAAAGA GAGAGAATAC
    AACAAATTAA AGGAACGCTT ACATCAATTA GTCATGAACA AAAAGGACAA AAAGATAGCT
    ATGGAAGTTC TAAATTATGT TGGTAGAGCT GATGGGAAGA GAGGTGCATG GAGGACTGAT
    AAGACAGAAG CCAGAAATGA AGAAGAAATG TACAAAGCTC TGTTAAGTGA TTATGAACAA
    CGCCAAAAAC AGCTTTTAGT GGAAAATGCT GAGCTGAAAA AAGTTCTTCA GCAAATGAAG
    AAAGAGATTA TTTCACTTCT GCCACCGCAG AAACAGAAAC CTAAAGAAAG GTCTGAAGAT
    GGGCCAGTGC TGTCAGACCT GGAGGAAGAC ATCGGAGAGT TAAATAAGGA GAATATGTGG
    GAACTGTCTT GTGAAACCGT TCGAGAGCAG CTTACCAACA GCATTAGAAA ACAATGGAGA
    ATGTTGAAAA ATCATGTTGA GAAGCTGGAT AACCAGGTGT CACGTGTACA TTCAGGAGCT
    TTGAATGAAA AAGATGTCAT TTCAAGAGAA GACCACGAGC TGCAAACTGA AAAGCTAGAG
    TTAGAGATTC AGCAGTGTAA AGAGATGATC AAAACTCAAC AACAGCTCTT ACAGCAACAG
    CTTATGTCTC CGTGTGACGA TGACACAACT CTGTTACTAC AGGACTGCTA TTTGTTGGAA
    GAAAGAGAGC GTCTTCAGGA GGAATGGACA CTATTTCGAG AACAAAAAAA GAATTTTGAG
    AAGGAACGAA GAAGTTTTAC AGAAGCTGCT ATTAGATTAG GACTTGAGAG AAAGGCATTT
    GAAGAAGATA GAGGAGCATG GCTGAAGCAA CAGTTCTTAA GTATGTCTAC TGATTACAAG
    CACTCTGAAA ATGTGACAAC TCCAAGTGCC TTCTTAGGAA GTTCTGACCA AGACAATCGG
    TTAGTGAAAT CTACATCTCA GCAAAGAAAA CCTCATTGTA CGTTGAGTGG TCCTGTTTCA
    GCAGAACCTT GTCAGACACC TCAGTATATT ATACATAACA GTTCCAGCGC TGCATCGAAA
    AAGCCCGCAG GAGATAGCAA GCCAAATCAG TGGGTGGAAA GTGACAAAGA GGAAACCCAG
    TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OCa63257
    Clone ID Related Accession (Same CDS sequence) XM_014939533.1 , XM_014939532.1 , XM_014939534.1 , XM_014939535.1
    Accession Version XM_014939532.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1683bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2015-12-08
    Organism Calidris pugnax(ruff)
    Product afadin- and alpha-actinin-binding protein isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015090812.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Calidris pugnax Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGGAGATT GGAAGACTAT TACTGTGCCA GTGCTGTCAT CAGATAGCAA AAATATTTTT 
    GAATATACCT CAGAAAAAAA GATATCTGCC CCAAGCATGA ACTCACAAGT GCTACGTTTG
    CCACTGCCTT CATCCAAAAA CATGCACAGC TTTTTCAGTG CCTTCTGCAC AGAAGAGAAT
    ATTGAACAGA GCATATCCTA TCTCGATAGG GAATTGACAA CGTTGGGCTT TCCTTCTATC
    TATATGGAGT CCAGAGAAAA AGAATTAAAC TTAATATCTA TCATAAATTG CATGAATGAA
    TTGCTTCTAC GGCAGCACAA GAACCTTCGA GCTCAGGAAG AAGTAGAAAT GCAGCATCTG
    AAACTGAGTA GTGATATGGA CCACTTACAG AACTGCTATG CTAAATTAAA GGAACAGTTG
    GAATTATCTA AAAGGGAAAT AGTTGGACTT CAGGAAAGAG ACAGACAACT GCAAAGCAAG
    AACAGAAATT TGCACCAGTT ACTTAAAAAT GAAAAGGATG AAGTACAAAA GTTACAGAAC
    ATAATTTCAA GTAGAGCTAC GCAGTACAAT CATGATATGA AGAGGAAAGA GAGAGAATAC
    AACAAATTAA AGGAACGCTT ACATCAATTA GTCATGAACA AAAAGGACAA AAAGATAGCT
    ATGGAAGTTC TAAATTATGT TGGTAGAGCT GATGGGAAGA GAGGTGCATG GAGGACTGAT
    AAGACAGAAG CCAGAAATGA AGAAGAAATG TACAAAGCTC TGTTAAGTGA TTATGAACAA
    CGCCAAAAAC AGCTTTTAGT GGAAAATGCT GAGCTGAAAA AAGTTCTTCA GCAAATGAAG
    AAAGAGATTA TTTCACTTCT GCCACCGCAG AAACAGAAAC CTAAAGAAAG GTCTGAAGAT
    GGGCCAGTGC TGTCAGACCT GGAGGAAGAC ATCGGAGAGT TAAATAAGGA GAATATGTGG
    GAACTGTCTT GTGAAACCGT TCGAGAGCAG CTTACCAACA GCATTAGAAA ACAATGGAGA
    ATGTTGAAAA ATCATGTTGA GAAGCTGGAT AACCAGGTGT CACGTGTACA TTCAGGAGCT
    TTGAATGAAA AAGATGTCAT TTCAAGAGAA GACCACGAGC TGCAAACTGA AAAGCTAGAG
    TTAGAGATTC AGCAGTGTAA AGAGATGATC AAAACTCAAC AACAGCTCTT ACAGCAACAG
    CTTATGTCTC CGTGTGACGA TGACACAACT CTGTTACTAC AGGACTGCTA TTTGTTGGAA
    GAAAGAGAGC GTCTTCAGGA GGAATGGACA CTATTTCGAG AACAAAAAAA GAATTTTGAG
    AAGGAACGAA GAAGTTTTAC AGAAGCTGCT ATTAGATTAG GACTTGAGAG AAAGGCATTT
    GAAGAAGATA GAGGAGCATG GCTGAAGCAA CAGTTCTTAA GTATGTCTAC TGATTACAAG
    CACTCTGAAA ATGTGACAAC TCCAAGTGCC TTCTTAGGAA GTTCTGACCA AGACAATCGG
    TTAGTGAAAT CTACATCTCA GCAAAGAAAA CCTCATTGTA CGTTGAGTGG TCCTGTTTCA
    GCAGAACCTT GTCAGACACC TCAGTATATT ATACATAACA GTTCCAGCGC TGCATCGAAA
    AAGCCCGCAG GAGATAGCAA GCCAAATCAG TGGGTGGAAA GTGACAAAGA GGAAACCCAG
    TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_014795018.1
    CDS401..2083
    Translation

    Target ORF information:

    RefSeq Version XM_014939532.1
    Organism Calidris pugnax(ruff)
    Definition Calidris pugnax synovial sarcoma, X breakpoint 2 interacting protein (SSX2IP), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_014939532.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGGAGATT GGAAGACTAT TACTGTGCCA GTGCTGTCAT CAGATAGCAA AAATATTTTT 
    GAATATACCT CAGAAAAAAA GATATCTGCC CCAAGCATGA ACTCACAAGT GCTACGTTTG
    CCACTGCCTT CATCCAAAAA CATGCACAGC TTTTTCAGTG CCTTCTGCAC AGAAGAGAAT
    ATTGAACAGA GCATATCCTA TCTCGATAGG GAATTGACAA CGTTGGGCTT TCCTTCTATC
    TATATGGAGT CCAGAGAAAA AGAATTAAAC TTAATATCTA TCATAAATTG CATGAATGAA
    TTGCTTCTAC GGCAGCACAA GAACCTTCGA GCTCAGGAAG AAGTAGAAAT GCAGCATCTG
    AAACTGAGTA GTGATATGGA CCACTTACAG AACTGCTATG CTAAATTAAA GGAACAGTTG
    GAATTATCTA AAAGGGAAAT AGTTGGACTT CAGGAAAGAG ACAGACAACT GCAAAGCAAG
    AACAGAAATT TGCACCAGTT ACTTAAAAAT GAAAAGGATG AAGTACAAAA GTTACAGAAC
    ATAATTTCAA GTAGAGCTAC GCAGTACAAT CATGATATGA AGAGGAAAGA GAGAGAATAC
    AACAAATTAA AGGAACGCTT ACATCAATTA GTCATGAACA AAAAGGACAA AAAGATAGCT
    ATGGAAGTTC TAAATTATGT TGGTAGAGCT GATGGGAAGA GAGGTGCATG GAGGACTGAT
    AAGACAGAAG CCAGAAATGA AGAAGAAATG TACAAAGCTC TGTTAAGTGA TTATGAACAA
    CGCCAAAAAC AGCTTTTAGT GGAAAATGCT GAGCTGAAAA AAGTTCTTCA GCAAATGAAG
    AAAGAGATTA TTTCACTTCT GCCACCGCAG AAACAGAAAC CTAAAGAAAG GTCTGAAGAT
    GGGCCAGTGC TGTCAGACCT GGAGGAAGAC ATCGGAGAGT TAAATAAGGA GAATATGTGG
    GAACTGTCTT GTGAAACCGT TCGAGAGCAG CTTACCAACA GCATTAGAAA ACAATGGAGA
    ATGTTGAAAA ATCATGTTGA GAAGCTGGAT AACCAGGTGT CACGTGTACA TTCAGGAGCT
    TTGAATGAAA AAGATGTCAT TTCAAGAGAA GACCACGAGC TGCAAACTGA AAAGCTAGAG
    TTAGAGATTC AGCAGTGTAA AGAGATGATC AAAACTCAAC AACAGCTCTT ACAGCAACAG
    CTTATGTCTC CGTGTGACGA TGACACAACT CTGTTACTAC AGGACTGCTA TTTGTTGGAA
    GAAAGAGAGC GTCTTCAGGA GGAATGGACA CTATTTCGAG AACAAAAAAA GAATTTTGAG
    AAGGAACGAA GAAGTTTTAC AGAAGCTGCT ATTAGATTAG GACTTGAGAG AAAGGCATTT
    GAAGAAGATA GAGGAGCATG GCTGAAGCAA CAGTTCTTAA GTATGTCTAC TGATTACAAG
    CACTCTGAAA ATGTGACAAC TCCAAGTGCC TTCTTAGGAA GTTCTGACCA AGACAATCGG
    TTAGTGAAAT CTACATCTCA GCAAAGAAAA CCTCATTGTA CGTTGAGTGG TCCTGTTTCA
    GCAGAACCTT GTCAGACACC TCAGTATATT ATACATAACA GTTCCAGCGC TGCATCGAAA
    AAGCCCGCAG GAGATAGCAA GCCAAATCAG TGGGTGGAAA GTGACAAAGA GGAAACCCAG
    TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OCa63257
    Clone ID Related Accession (Same CDS sequence) XM_014939533.1 , XM_014939532.1 , XM_014939534.1 , XM_014939535.1
    Accession Version XM_014939534.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1683bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2015-12-08
    Organism Calidris pugnax(ruff)
    Product afadin- and alpha-actinin-binding protein isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015090812.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Calidris pugnax Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGGAGATT GGAAGACTAT TACTGTGCCA GTGCTGTCAT CAGATAGCAA AAATATTTTT 
    GAATATACCT CAGAAAAAAA GATATCTGCC CCAAGCATGA ACTCACAAGT GCTACGTTTG
    CCACTGCCTT CATCCAAAAA CATGCACAGC TTTTTCAGTG CCTTCTGCAC AGAAGAGAAT
    ATTGAACAGA GCATATCCTA TCTCGATAGG GAATTGACAA CGTTGGGCTT TCCTTCTATC
    TATATGGAGT CCAGAGAAAA AGAATTAAAC TTAATATCTA TCATAAATTG CATGAATGAA
    TTGCTTCTAC GGCAGCACAA GAACCTTCGA GCTCAGGAAG AAGTAGAAAT GCAGCATCTG
    AAACTGAGTA GTGATATGGA CCACTTACAG AACTGCTATG CTAAATTAAA GGAACAGTTG
    GAATTATCTA AAAGGGAAAT AGTTGGACTT CAGGAAAGAG ACAGACAACT GCAAAGCAAG
    AACAGAAATT TGCACCAGTT ACTTAAAAAT GAAAAGGATG AAGTACAAAA GTTACAGAAC
    ATAATTTCAA GTAGAGCTAC GCAGTACAAT CATGATATGA AGAGGAAAGA GAGAGAATAC
    AACAAATTAA AGGAACGCTT ACATCAATTA GTCATGAACA AAAAGGACAA AAAGATAGCT
    ATGGAAGTTC TAAATTATGT TGGTAGAGCT GATGGGAAGA GAGGTGCATG GAGGACTGAT
    AAGACAGAAG CCAGAAATGA AGAAGAAATG TACAAAGCTC TGTTAAGTGA TTATGAACAA
    CGCCAAAAAC AGCTTTTAGT GGAAAATGCT GAGCTGAAAA AAGTTCTTCA GCAAATGAAG
    AAAGAGATTA TTTCACTTCT GCCACCGCAG AAACAGAAAC CTAAAGAAAG GTCTGAAGAT
    GGGCCAGTGC TGTCAGACCT GGAGGAAGAC ATCGGAGAGT TAAATAAGGA GAATATGTGG
    GAACTGTCTT GTGAAACCGT TCGAGAGCAG CTTACCAACA GCATTAGAAA ACAATGGAGA
    ATGTTGAAAA ATCATGTTGA GAAGCTGGAT AACCAGGTGT CACGTGTACA TTCAGGAGCT
    TTGAATGAAA AAGATGTCAT TTCAAGAGAA GACCACGAGC TGCAAACTGA AAAGCTAGAG
    TTAGAGATTC AGCAGTGTAA AGAGATGATC AAAACTCAAC AACAGCTCTT ACAGCAACAG
    CTTATGTCTC CGTGTGACGA TGACACAACT CTGTTACTAC AGGACTGCTA TTTGTTGGAA
    GAAAGAGAGC GTCTTCAGGA GGAATGGACA CTATTTCGAG AACAAAAAAA GAATTTTGAG
    AAGGAACGAA GAAGTTTTAC AGAAGCTGCT ATTAGATTAG GACTTGAGAG AAAGGCATTT
    GAAGAAGATA GAGGAGCATG GCTGAAGCAA CAGTTCTTAA GTATGTCTAC TGATTACAAG
    CACTCTGAAA ATGTGACAAC TCCAAGTGCC TTCTTAGGAA GTTCTGACCA AGACAATCGG
    TTAGTGAAAT CTACATCTCA GCAAAGAAAA CCTCATTGTA CGTTGAGTGG TCCTGTTTCA
    GCAGAACCTT GTCAGACACC TCAGTATATT ATACATAACA GTTCCAGCGC TGCATCGAAA
    AAGCCCGCAG GAGATAGCAA GCCAAATCAG TGGGTGGAAA GTGACAAAGA GGAAACCCAG
    TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_014795020.1
    CDS361..2043
    Translation

    Target ORF information:

    RefSeq Version XM_014939534.1
    Organism Calidris pugnax(ruff)
    Definition Calidris pugnax synovial sarcoma, X breakpoint 2 interacting protein (SSX2IP), transcript variant X3, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_014939534.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGGAGATT GGAAGACTAT TACTGTGCCA GTGCTGTCAT CAGATAGCAA AAATATTTTT 
    GAATATACCT CAGAAAAAAA GATATCTGCC CCAAGCATGA ACTCACAAGT GCTACGTTTG
    CCACTGCCTT CATCCAAAAA CATGCACAGC TTTTTCAGTG CCTTCTGCAC AGAAGAGAAT
    ATTGAACAGA GCATATCCTA TCTCGATAGG GAATTGACAA CGTTGGGCTT TCCTTCTATC
    TATATGGAGT CCAGAGAAAA AGAATTAAAC TTAATATCTA TCATAAATTG CATGAATGAA
    TTGCTTCTAC GGCAGCACAA GAACCTTCGA GCTCAGGAAG AAGTAGAAAT GCAGCATCTG
    AAACTGAGTA GTGATATGGA CCACTTACAG AACTGCTATG CTAAATTAAA GGAACAGTTG
    GAATTATCTA AAAGGGAAAT AGTTGGACTT CAGGAAAGAG ACAGACAACT GCAAAGCAAG
    AACAGAAATT TGCACCAGTT ACTTAAAAAT GAAAAGGATG AAGTACAAAA GTTACAGAAC
    ATAATTTCAA GTAGAGCTAC GCAGTACAAT CATGATATGA AGAGGAAAGA GAGAGAATAC
    AACAAATTAA AGGAACGCTT ACATCAATTA GTCATGAACA AAAAGGACAA AAAGATAGCT
    ATGGAAGTTC TAAATTATGT TGGTAGAGCT GATGGGAAGA GAGGTGCATG GAGGACTGAT
    AAGACAGAAG CCAGAAATGA AGAAGAAATG TACAAAGCTC TGTTAAGTGA TTATGAACAA
    CGCCAAAAAC AGCTTTTAGT GGAAAATGCT GAGCTGAAAA AAGTTCTTCA GCAAATGAAG
    AAAGAGATTA TTTCACTTCT GCCACCGCAG AAACAGAAAC CTAAAGAAAG GTCTGAAGAT
    GGGCCAGTGC TGTCAGACCT GGAGGAAGAC ATCGGAGAGT TAAATAAGGA GAATATGTGG
    GAACTGTCTT GTGAAACCGT TCGAGAGCAG CTTACCAACA GCATTAGAAA ACAATGGAGA
    ATGTTGAAAA ATCATGTTGA GAAGCTGGAT AACCAGGTGT CACGTGTACA TTCAGGAGCT
    TTGAATGAAA AAGATGTCAT TTCAAGAGAA GACCACGAGC TGCAAACTGA AAAGCTAGAG
    TTAGAGATTC AGCAGTGTAA AGAGATGATC AAAACTCAAC AACAGCTCTT ACAGCAACAG
    CTTATGTCTC CGTGTGACGA TGACACAACT CTGTTACTAC AGGACTGCTA TTTGTTGGAA
    GAAAGAGAGC GTCTTCAGGA GGAATGGACA CTATTTCGAG AACAAAAAAA GAATTTTGAG
    AAGGAACGAA GAAGTTTTAC AGAAGCTGCT ATTAGATTAG GACTTGAGAG AAAGGCATTT
    GAAGAAGATA GAGGAGCATG GCTGAAGCAA CAGTTCTTAA GTATGTCTAC TGATTACAAG
    CACTCTGAAA ATGTGACAAC TCCAAGTGCC TTCTTAGGAA GTTCTGACCA AGACAATCGG
    TTAGTGAAAT CTACATCTCA GCAAAGAAAA CCTCATTGTA CGTTGAGTGG TCCTGTTTCA
    GCAGAACCTT GTCAGACACC TCAGTATATT ATACATAACA GTTCCAGCGC TGCATCGAAA
    AAGCCCGCAG GAGATAGCAA GCCAAATCAG TGGGTGGAAA GTGACAAAGA GGAAACCCAG
    TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OCa63257
    Clone ID Related Accession (Same CDS sequence) XM_014939533.1 , XM_014939532.1 , XM_014939534.1 , XM_014939535.1
    Accession Version XM_014939535.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1683bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2015-12-08
    Organism Calidris pugnax(ruff)
    Product afadin- and alpha-actinin-binding protein isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015090812.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Calidris pugnax Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGGAGATT GGAAGACTAT TACTGTGCCA GTGCTGTCAT CAGATAGCAA AAATATTTTT 
    GAATATACCT CAGAAAAAAA GATATCTGCC CCAAGCATGA ACTCACAAGT GCTACGTTTG
    CCACTGCCTT CATCCAAAAA CATGCACAGC TTTTTCAGTG CCTTCTGCAC AGAAGAGAAT
    ATTGAACAGA GCATATCCTA TCTCGATAGG GAATTGACAA CGTTGGGCTT TCCTTCTATC
    TATATGGAGT CCAGAGAAAA AGAATTAAAC TTAATATCTA TCATAAATTG CATGAATGAA
    TTGCTTCTAC GGCAGCACAA GAACCTTCGA GCTCAGGAAG AAGTAGAAAT GCAGCATCTG
    AAACTGAGTA GTGATATGGA CCACTTACAG AACTGCTATG CTAAATTAAA GGAACAGTTG
    GAATTATCTA AAAGGGAAAT AGTTGGACTT CAGGAAAGAG ACAGACAACT GCAAAGCAAG
    AACAGAAATT TGCACCAGTT ACTTAAAAAT GAAAAGGATG AAGTACAAAA GTTACAGAAC
    ATAATTTCAA GTAGAGCTAC GCAGTACAAT CATGATATGA AGAGGAAAGA GAGAGAATAC
    AACAAATTAA AGGAACGCTT ACATCAATTA GTCATGAACA AAAAGGACAA AAAGATAGCT
    ATGGAAGTTC TAAATTATGT TGGTAGAGCT GATGGGAAGA GAGGTGCATG GAGGACTGAT
    AAGACAGAAG CCAGAAATGA AGAAGAAATG TACAAAGCTC TGTTAAGTGA TTATGAACAA
    CGCCAAAAAC AGCTTTTAGT GGAAAATGCT GAGCTGAAAA AAGTTCTTCA GCAAATGAAG
    AAAGAGATTA TTTCACTTCT GCCACCGCAG AAACAGAAAC CTAAAGAAAG GTCTGAAGAT
    GGGCCAGTGC TGTCAGACCT GGAGGAAGAC ATCGGAGAGT TAAATAAGGA GAATATGTGG
    GAACTGTCTT GTGAAACCGT TCGAGAGCAG CTTACCAACA GCATTAGAAA ACAATGGAGA
    ATGTTGAAAA ATCATGTTGA GAAGCTGGAT AACCAGGTGT CACGTGTACA TTCAGGAGCT
    TTGAATGAAA AAGATGTCAT TTCAAGAGAA GACCACGAGC TGCAAACTGA AAAGCTAGAG
    TTAGAGATTC AGCAGTGTAA AGAGATGATC AAAACTCAAC AACAGCTCTT ACAGCAACAG
    CTTATGTCTC CGTGTGACGA TGACACAACT CTGTTACTAC AGGACTGCTA TTTGTTGGAA
    GAAAGAGAGC GTCTTCAGGA GGAATGGACA CTATTTCGAG AACAAAAAAA GAATTTTGAG
    AAGGAACGAA GAAGTTTTAC AGAAGCTGCT ATTAGATTAG GACTTGAGAG AAAGGCATTT
    GAAGAAGATA GAGGAGCATG GCTGAAGCAA CAGTTCTTAA GTATGTCTAC TGATTACAAG
    CACTCTGAAA ATGTGACAAC TCCAAGTGCC TTCTTAGGAA GTTCTGACCA AGACAATCGG
    TTAGTGAAAT CTACATCTCA GCAAAGAAAA CCTCATTGTA CGTTGAGTGG TCCTGTTTCA
    GCAGAACCTT GTCAGACACC TCAGTATATT ATACATAACA GTTCCAGCGC TGCATCGAAA
    AAGCCCGCAG GAGATAGCAA GCCAAATCAG TGGGTGGAAA GTGACAAAGA GGAAACCCAG
    TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_014795021.1
    CDS298..1980
    Translation

    Target ORF information:

    RefSeq Version XM_014939535.1
    Organism Calidris pugnax(ruff)
    Definition Calidris pugnax synovial sarcoma, X breakpoint 2 interacting protein (SSX2IP), transcript variant X4, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_014939535.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGGAGATT GGAAGACTAT TACTGTGCCA GTGCTGTCAT CAGATAGCAA AAATATTTTT 
    GAATATACCT CAGAAAAAAA GATATCTGCC CCAAGCATGA ACTCACAAGT GCTACGTTTG
    CCACTGCCTT CATCCAAAAA CATGCACAGC TTTTTCAGTG CCTTCTGCAC AGAAGAGAAT
    ATTGAACAGA GCATATCCTA TCTCGATAGG GAATTGACAA CGTTGGGCTT TCCTTCTATC
    TATATGGAGT CCAGAGAAAA AGAATTAAAC TTAATATCTA TCATAAATTG CATGAATGAA
    TTGCTTCTAC GGCAGCACAA GAACCTTCGA GCTCAGGAAG AAGTAGAAAT GCAGCATCTG
    AAACTGAGTA GTGATATGGA CCACTTACAG AACTGCTATG CTAAATTAAA GGAACAGTTG
    GAATTATCTA AAAGGGAAAT AGTTGGACTT CAGGAAAGAG ACAGACAACT GCAAAGCAAG
    AACAGAAATT TGCACCAGTT ACTTAAAAAT GAAAAGGATG AAGTACAAAA GTTACAGAAC
    ATAATTTCAA GTAGAGCTAC GCAGTACAAT CATGATATGA AGAGGAAAGA GAGAGAATAC
    AACAAATTAA AGGAACGCTT ACATCAATTA GTCATGAACA AAAAGGACAA AAAGATAGCT
    ATGGAAGTTC TAAATTATGT TGGTAGAGCT GATGGGAAGA GAGGTGCATG GAGGACTGAT
    AAGACAGAAG CCAGAAATGA AGAAGAAATG TACAAAGCTC TGTTAAGTGA TTATGAACAA
    CGCCAAAAAC AGCTTTTAGT GGAAAATGCT GAGCTGAAAA AAGTTCTTCA GCAAATGAAG
    AAAGAGATTA TTTCACTTCT GCCACCGCAG AAACAGAAAC CTAAAGAAAG GTCTGAAGAT
    GGGCCAGTGC TGTCAGACCT GGAGGAAGAC ATCGGAGAGT TAAATAAGGA GAATATGTGG
    GAACTGTCTT GTGAAACCGT TCGAGAGCAG CTTACCAACA GCATTAGAAA ACAATGGAGA
    ATGTTGAAAA ATCATGTTGA GAAGCTGGAT AACCAGGTGT CACGTGTACA TTCAGGAGCT
    TTGAATGAAA AAGATGTCAT TTCAAGAGAA GACCACGAGC TGCAAACTGA AAAGCTAGAG
    TTAGAGATTC AGCAGTGTAA AGAGATGATC AAAACTCAAC AACAGCTCTT ACAGCAACAG
    CTTATGTCTC CGTGTGACGA TGACACAACT CTGTTACTAC AGGACTGCTA TTTGTTGGAA
    GAAAGAGAGC GTCTTCAGGA GGAATGGACA CTATTTCGAG AACAAAAAAA GAATTTTGAG
    AAGGAACGAA GAAGTTTTAC AGAAGCTGCT ATTAGATTAG GACTTGAGAG AAAGGCATTT
    GAAGAAGATA GAGGAGCATG GCTGAAGCAA CAGTTCTTAA GTATGTCTAC TGATTACAAG
    CACTCTGAAA ATGTGACAAC TCCAAGTGCC TTCTTAGGAA GTTCTGACCA AGACAATCGG
    TTAGTGAAAT CTACATCTCA GCAAAGAAAA CCTCATTGTA CGTTGAGTGG TCCTGTTTCA
    GCAGAACCTT GTCAGACACC TCAGTATATT ATACATAACA GTTCCAGCGC TGCATCGAAA
    AAGCCCGCAG GAGATAGCAA GCCAAATCAG TGGGTGGAAA GTGACAAAGA GGAAACCCAG
    TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OCa63258
    Clone ID Related Accession (Same CDS sequence) XM_014939536.1
    Accession Version XM_014939536.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1623bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2015-12-08
    Organism Calidris pugnax(ruff)
    Product afadin- and alpha-actinin-binding protein isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015090812.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Calidris pugnax Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGGGAGATT GGAAGACTAT TACTGTGCCA GTGCTGTCAT CAGATAGCAA AAATATTTTT 
    GAATATACCT CAGAAAAAAA GATATCTGCC CCAAGCATGA ACTCACAAGT GCTACGTTTG
    CCACTGCCTT CATCCAAAAA CATGCACAGC TTTTTCAGTG CCTTCTGCAC AGAAGAGAAT
    ATTGAACAGA GCATATCCTA TCTCGATAGG GAATTGACAA CGTTGGGCTT TCCTTCTATC
    TATATGGAGT CCAGAGAAAA AGAATTAAAC TTAATATCTA TCATAAATTG CATGAATGAA
    TTGCTTCTAC GGCAGCACAA GAACCTTCGA GCTCAGGAAG AAGTAGAAAT GCAGCATCTG
    AAACTGAGTA GTGATATGGA CCACTTACAG AACTGCTATG CTAAATTAAA GGAACAGTTG
    GAATTATCTA AAAGGGAAAT AGTTGGACTT CAGGAAAGAG ACAGACAACT GCAAAGCAAG
    AACAGAAATT TGCACCAGTT ACTTAAAAAT GAAAAGGATG AAGTACAAAA GTTACAGAAC
    ATAATTTCAA GTAGAGCTAC GCAGTACAAT CATGATATGA AGAGGAAAGA GAGAGAATAC
    AACAAATTAA AGGAACGCTT ACATCAATTA GTCATGAACA AAAAGGACAA AAAGATAGCT
    ATGGAAGTTC TAAATTATGT TGGTAGAGCT GATGGGAAGA GAGGTGCATG GAGGACTGAT
    AAGACAGAAG CCAGAAATGA AGAAGAAATG TACAAAGCTC TGTTAAGTGA TTATGAACAA
    CGCCAAAAAC AGCTTTTAGT GGAAAATGCT GAGCTGAAAA AAGTTCTTCA GCAAATGAAG
    AAAGAGATTA TTTCACTTCT GCCACCGCAG AAACAGAAAC CTAAAGAAAG GTCTGAAGAT
    GGGCCAGTGC TGTCAGACCT GGAGGAAGAC ATCGGAGAGT TAAATAAGGA GAATATGTGG
    GAACTGTCTT GTGAAACCGT TCGAGAGCAG CTTACCAACA GCATTAGAAA ACAATGGAGA
    ATGTTGAAAA ATCATGTTGA GAAGCTGGAT AACCAGGTGT CACGTGTACA TTCAGGAGCT
    TTGAATGAAA AAGATGTCAT TTCAAGAGAA GACCACGAGC TGCAAACTGA AAAGCTAGAG
    TTAGAGATTC AGCAGTGTAA AGAGATGATC AAAACTCAAC AACAGCTCTT ACAGCAACAG
    CTTATGTCTC CGTGTGACGA TGACACAACT CTGTTACTAC AGGACTGCTA TTTGTTGGAA
    GAAAGAGAGC GTCTTCAGGA GGAATGGACA CTATTTCGAG AACAAAAAAA GAATTTTGAG
    AAGGAACGAA GAAGTTTTAC AGAAGCTGCT ATTAGATTAG GACTTGAGAG AAAGGCATTT
    GAAGAAGATA GAGGAGCATG GCTGAAGCAA CAGTTCTTAA GTTCTGACCA AGACAATCGG
    TTAGTGAAAT CTACATCTCA GCAAAGAAAA CCTCATTGTA CGTTGAGTGG TCCTGTTTCA
    GCAGAACCTT GTCAGACACC TCAGTATATT ATACATAACA GTTCCAGCGC TGCATCGAAA
    AAGCCCGCAG GAGATAGCAA GCCAAATCAG TGGGTGGAAA GTGACAAAGA GGAAACCCAG
    TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_014795022.1
    CDS361..1983
    Translation

    Target ORF information:

    RefSeq Version XM_014939536.1
    Organism Calidris pugnax(ruff)
    Definition Calidris pugnax synovial sarcoma, X breakpoint 2 interacting protein (SSX2IP), transcript variant X5, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_014939536.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGGGAGATT GGAAGACTAT TACTGTGCCA GTGCTGTCAT CAGATAGCAA AAATATTTTT 
    GAATATACCT CAGAAAAAAA GATATCTGCC CCAAGCATGA ACTCACAAGT GCTACGTTTG
    CCACTGCCTT CATCCAAAAA CATGCACAGC TTTTTCAGTG CCTTCTGCAC AGAAGAGAAT
    ATTGAACAGA GCATATCCTA TCTCGATAGG GAATTGACAA CGTTGGGCTT TCCTTCTATC
    TATATGGAGT CCAGAGAAAA AGAATTAAAC TTAATATCTA TCATAAATTG CATGAATGAA
    TTGCTTCTAC GGCAGCACAA GAACCTTCGA GCTCAGGAAG AAGTAGAAAT GCAGCATCTG
    AAACTGAGTA GTGATATGGA CCACTTACAG AACTGCTATG CTAAATTAAA GGAACAGTTG
    GAATTATCTA AAAGGGAAAT AGTTGGACTT CAGGAAAGAG ACAGACAACT GCAAAGCAAG
    AACAGAAATT TGCACCAGTT ACTTAAAAAT GAAAAGGATG AAGTACAAAA GTTACAGAAC
    ATAATTTCAA GTAGAGCTAC GCAGTACAAT CATGATATGA AGAGGAAAGA GAGAGAATAC
    AACAAATTAA AGGAACGCTT ACATCAATTA GTCATGAACA AAAAGGACAA AAAGATAGCT
    ATGGAAGTTC TAAATTATGT TGGTAGAGCT GATGGGAAGA GAGGTGCATG GAGGACTGAT
    AAGACAGAAG CCAGAAATGA AGAAGAAATG TACAAAGCTC TGTTAAGTGA TTATGAACAA
    CGCCAAAAAC AGCTTTTAGT GGAAAATGCT GAGCTGAAAA AAGTTCTTCA GCAAATGAAG
    AAAGAGATTA TTTCACTTCT GCCACCGCAG AAACAGAAAC CTAAAGAAAG GTCTGAAGAT
    GGGCCAGTGC TGTCAGACCT GGAGGAAGAC ATCGGAGAGT TAAATAAGGA GAATATGTGG
    GAACTGTCTT GTGAAACCGT TCGAGAGCAG CTTACCAACA GCATTAGAAA ACAATGGAGA
    ATGTTGAAAA ATCATGTTGA GAAGCTGGAT AACCAGGTGT CACGTGTACA TTCAGGAGCT
    TTGAATGAAA AAGATGTCAT TTCAAGAGAA GACCACGAGC TGCAAACTGA AAAGCTAGAG
    TTAGAGATTC AGCAGTGTAA AGAGATGATC AAAACTCAAC AACAGCTCTT ACAGCAACAG
    CTTATGTCTC CGTGTGACGA TGACACAACT CTGTTACTAC AGGACTGCTA TTTGTTGGAA
    GAAAGAGAGC GTCTTCAGGA GGAATGGACA CTATTTCGAG AACAAAAAAA GAATTTTGAG
    AAGGAACGAA GAAGTTTTAC AGAAGCTGCT ATTAGATTAG GACTTGAGAG AAAGGCATTT
    GAAGAAGATA GAGGAGCATG GCTGAAGCAA CAGTTCTTAA GTTCTGACCA AGACAATCGG
    TTAGTGAAAT CTACATCTCA GCAAAGAAAA CCTCATTGTA CGTTGAGTGG TCCTGTTTCA
    GCAGAACCTT GTCAGACACC TCAGTATATT ATACATAACA GTTCCAGCGC TGCATCGAAA
    AAGCCCGCAG GAGATAGCAA GCCAAATCAG TGGGTGGAAA GTGACAAAGA GGAAACCCAG
    TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OCa63259
    Clone ID Related Accession (Same CDS sequence) XM_014939538.1
    Accession Version XM_014939538.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1587bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2015-12-08
    Organism Calidris pugnax(ruff)
    Product afadin- and alpha-actinin-binding protein isoform X3
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015090812.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Calidris pugnax Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGAACTCAC AAGTGCTACG TTTGCCACTG CCTTCATCCA AAAACATGCA CAGCTTTTTC 
    AGTGCCTTCT GCACAGAAGA GAATATTGAA CAGAGCATAT CCTATCTCGA TAGGGAATTG
    ACAACGTTGG GCTTTCCTTC TATCTATATG GAGTCCAGAG AAAAAGAATT AAACTTAATA
    TCTATCATAA ATTGCATGAA TGAATTGCTT CTACGGCAGC ACAAGAACCT TCGAGCTCAG
    GAAGAAGTAG AAATGCAGCA TCTGAAACTG AGTAGTGATA TGGACCACTT ACAGAACTGC
    TATGCTAAAT TAAAGGAACA GTTGGAATTA TCTAAAAGGG AAATAGTTGG ACTTCAGGAA
    AGAGACAGAC AACTGCAAAG CAAGAACAGA AATTTGCACC AGTTACTTAA AAATGAAAAG
    GATGAAGTAC AAAAGTTACA GAACATAATT TCAAGTAGAG CTACGCAGTA CAATCATGAT
    ATGAAGAGGA AAGAGAGAGA ATACAACAAA TTAAAGGAAC GCTTACATCA ATTAGTCATG
    AACAAAAAGG ACAAAAAGAT AGCTATGGAA GTTCTAAATT ATGTTGGTAG AGCTGATGGG
    AAGAGAGGTG CATGGAGGAC TGATAAGACA GAAGCCAGAA ATGAAGAAGA AATGTACAAA
    GCTCTGTTAA GTGATTATGA ACAACGCCAA AAACAGCTTT TAGTGGAAAA TGCTGAGCTG
    AAAAAAGTTC TTCAGCAAAT GAAGAAAGAG ATTATTTCAC TTCTGCCACC GCAGAAACAG
    AAACCTAAAG AAAGGTCTGA AGATGGGCCA GTGCTGTCAG ACCTGGAGGA AGACATCGGA
    GAGTTAAATA AGGAGAATAT GTGGGAACTG TCTTGTGAAA CCGTTCGAGA GCAGCTTACC
    AACAGCATTA GAAAACAATG GAGAATGTTG AAAAATCATG TTGAGAAGCT GGATAACCAG
    GTGTCACGTG TACATTCAGG AGCTTTGAAT GAAAAAGATG TCATTTCAAG AGAAGACCAC
    GAGCTGCAAA CTGAAAAGCT AGAGTTAGAG ATTCAGCAGT GTAAAGAGAT GATCAAAACT
    CAACAACAGC TCTTACAGCA ACAGCTTATG TCTCCGTGTG ACGATGACAC AACTCTGTTA
    CTACAGGACT GCTATTTGTT GGAAGAAAGA GAGCGTCTTC AGGAGGAATG GACACTATTT
    CGAGAACAAA AAAAGAATTT TGAGAAGGAA CGAAGAAGTT TTACAGAAGC TGCTATTAGA
    TTAGGACTTG AGAGAAAGGC ATTTGAAGAA GATAGAGGAG CATGGCTGAA GCAACAGTTC
    TTAAGTATGT CTACTGATTA CAAGCACTCT GAAAATGTGA CAACTCCAAG TGCCTTCTTA
    GGAAGTTCTG ACCAAGACAA TCGGTTAGTG AAATCTACAT CTCAGCAAAG AAAACCTCAT
    TGTACGTTGA GTGGTCCTGT TTCAGCAGAA CCTTGTCAGA CACCTCAGTA TATTATACAT
    AACAGTTCCA GCGCTGCATC GAAAAAGCCC GCAGGAGATA GCAAGCCAAA TCAGTGGGTG
    GAAAGTGACA AAGAGGAAAC CCAGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_014795024.1
    CDS391..1977
    Translation

    Target ORF information:

    RefSeq Version XM_014939538.1
    Organism Calidris pugnax(ruff)
    Definition Calidris pugnax synovial sarcoma, X breakpoint 2 interacting protein (SSX2IP), transcript variant X6, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_014939538.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGAACTCAC AAGTGCTACG TTTGCCACTG CCTTCATCCA AAAACATGCA CAGCTTTTTC 
    AGTGCCTTCT GCACAGAAGA GAATATTGAA CAGAGCATAT CCTATCTCGA TAGGGAATTG
    ACAACGTTGG GCTTTCCTTC TATCTATATG GAGTCCAGAG AAAAAGAATT AAACTTAATA
    TCTATCATAA ATTGCATGAA TGAATTGCTT CTACGGCAGC ACAAGAACCT TCGAGCTCAG
    GAAGAAGTAG AAATGCAGCA TCTGAAACTG AGTAGTGATA TGGACCACTT ACAGAACTGC
    TATGCTAAAT TAAAGGAACA GTTGGAATTA TCTAAAAGGG AAATAGTTGG ACTTCAGGAA
    AGAGACAGAC AACTGCAAAG CAAGAACAGA AATTTGCACC AGTTACTTAA AAATGAAAAG
    GATGAAGTAC AAAAGTTACA GAACATAATT TCAAGTAGAG CTACGCAGTA CAATCATGAT
    ATGAAGAGGA AAGAGAGAGA ATACAACAAA TTAAAGGAAC GCTTACATCA ATTAGTCATG
    AACAAAAAGG ACAAAAAGAT AGCTATGGAA GTTCTAAATT ATGTTGGTAG AGCTGATGGG
    AAGAGAGGTG CATGGAGGAC TGATAAGACA GAAGCCAGAA ATGAAGAAGA AATGTACAAA
    GCTCTGTTAA GTGATTATGA ACAACGCCAA AAACAGCTTT TAGTGGAAAA TGCTGAGCTG
    AAAAAAGTTC TTCAGCAAAT GAAGAAAGAG ATTATTTCAC TTCTGCCACC GCAGAAACAG
    AAACCTAAAG AAAGGTCTGA AGATGGGCCA GTGCTGTCAG ACCTGGAGGA AGACATCGGA
    GAGTTAAATA AGGAGAATAT GTGGGAACTG TCTTGTGAAA CCGTTCGAGA GCAGCTTACC
    AACAGCATTA GAAAACAATG GAGAATGTTG AAAAATCATG TTGAGAAGCT GGATAACCAG
    GTGTCACGTG TACATTCAGG AGCTTTGAAT GAAAAAGATG TCATTTCAAG AGAAGACCAC
    GAGCTGCAAA CTGAAAAGCT AGAGTTAGAG ATTCAGCAGT GTAAAGAGAT GATCAAAACT
    CAACAACAGC TCTTACAGCA ACAGCTTATG TCTCCGTGTG ACGATGACAC AACTCTGTTA
    CTACAGGACT GCTATTTGTT GGAAGAAAGA GAGCGTCTTC AGGAGGAATG GACACTATTT
    CGAGAACAAA AAAAGAATTT TGAGAAGGAA CGAAGAAGTT TTACAGAAGC TGCTATTAGA
    TTAGGACTTG AGAGAAAGGC ATTTGAAGAA GATAGAGGAG CATGGCTGAA GCAACAGTTC
    TTAAGTATGT CTACTGATTA CAAGCACTCT GAAAATGTGA CAACTCCAAG TGCCTTCTTA
    GGAAGTTCTG ACCAAGACAA TCGGTTAGTG AAATCTACAT CTCAGCAAAG AAAACCTCAT
    TGTACGTTGA GTGGTCCTGT TTCAGCAGAA CCTTGTCAGA CACCTCAGTA TATTATACAT
    AACAGTTCCA GCGCTGCATC GAAAAAGCCC GCAGGAGATA GCAAGCCAAA TCAGTGGGTG
    GAAAGTGACA AAGAGGAAAC CCAGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.