Gene Symbol |
PCYT1BA |
Entrez Gene ID |
100001552 |
Full Name |
phosphate cytidylyltransferase 1, choline, beta a |
Synonyms |
pcyt1b |
General protein information |
- Preferred Names
phosphate cytidylyltransferase 1, choline, beta a
Names
choline-phosphate cytidylyltransferase B
|
Gene Type |
protein-coding |
Organism |
Danio rerio(Zebrafish) |
mRNA and Protein(s)
mRNA |
Protein |
Name |
XM_005162665.4 |
XP_005162722.1 |
choline-phosphate cytidylyltransferase B isoform X1 |
XM_021470092.1 |
XP_021325767.1 |
choline-phosphate cytidylyltransferase B isoform X2 |
NM_001082946.1 |
NP_001076415.1 |
choline-phosphate cytidylyltransferase B |
XM_005162665.3 |
XP_005162722.1 |
choline-phosphate cytidylyltransferase B isoform X1 |
Bos taurus (cattle) |
PCYT1B |
NP_001179980.1 |
Oryza sativa (rice) |
Os10g0578900 |
NP_001065503.1 |
Xenopus tropicalis (tropical clawed frog) |
pcyt1b |
XP_004911814.1 |
Homo sapiens (human) |
PCYT1B |
NP_004836.2 |
Canis lupus familiaris (dog) |
PCYT1B |
XP_548900.2 |
Rattus norvegicus (Norway rat) |
Pcyt1b |
NP_775174.1 |
Danio rerio (zebrafish) |
pcyt1ba |
NP_001076415.1 |
Mus musculus (house mouse) |
Pcyt1b |
NP_997593.1 |
Oryza sativa (rice) |
Os08g0161800 |
NP_001061052.1 |
|
PCYT1B |
XP_001090055.2 |
Gallus gallus (chicken) |
PCYT1B |
XP_416793.4 |
Related articles in PubMed
Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)
Reconstruction of a 450-My-old ancestral vertebrate protokaryotype.
Kohn M, H?gel J, Vogel W, Minich P, Kehrer-Sawatzki H, Graves JA, Hameister H
Trends in genetics : TIG22(4)203-10(2006 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following PCYT1BA gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PCYT1BA cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
ODa32331 |
Clone ID Related Accession (Same CDS sequence) |
NM_001082946.1
|
Accession Version |
NM_001082946.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1032bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-01-26 |
Organism |
Danio rerio(zebrafish) |
Product |
choline-phosphate cytidylyltransferase B |
Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC133902.1. On Mar 15, 2007 this sequence version replaced XM_001338287.1.
##Evidence-Data-START##
Transcript exon combination :: BC133902.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348]
##Evidence-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGGAGGAGC TGGAACATAC CTGTCCGCTG CCACGAACGA CTCTTATAGA ACCGGCCATA TTTACTCCAG AGACGAGTTG TGAGTGTCGA GCGCCACATG AAAAGCTGAC TGTAGATCAA GCTAGCCATG GAACGCCAGT GGACCGACCG GTGCGAGTCT ACGCAGATGG CATCTTCGAT CTCTTTCATT CCGGTCACGC TCGTGCCCTC ATGCAGGCTA AGAATCTGTT CCCCAACACC TACCTTATAG TTGGAGTATG CAGCGATGAA CTTACACACA AGTACAAGGG CTTCACCGTC ATGACAGAAG ACGAGCGCTA TGAGGCATTA AGACACTGCC GATACGTCGA CGAGGTTTTG CGCGATGCTC CTTGGACTCT GACACAAGAC TTTTTAGAAA AACACAAGAT TGACTTTGTG GCACACGATG ACATCCCATA CTCCTCCGCT GGATCTGAGG ATGTGTACAA GCATATTAAG GAGGCAGGTA TGTTTGTGCC CACTAAAAGG ACAGAAGGGA TCTCTACGTC TGACCTGATC ACCCGGATAG TGAGAGACTA TGACGTCTAT GCTAGACGCA ACCTGCAGAG GGGCTACACC GCTAAAGAAC TGAACGTCAG TTACATTAAT GAGAAGAAGT ATCGTCTGCA GAATCAGGTG GACAGAATGA AGGAAAAAGT GCGGACCGTA GAGGAAAAGT CAAAGCACTT TGTGTACCGA GTGGAGGAGA AGAGCCATGA TCTGATCCAG AAGTGGGAAG AGAAATCAAG AGAGTTCATT GGGAATTTCC TGGAGCTCTT TGGCCCAGAT GGAACATGGA AGCAGATGTT TCAGGAGAGA AGCGGCCGTA TGATTCAGGC CTTTTCACCA CGTGGCTCAC CCAGCAGCAG CCCTCCAAGG GACTTTTCTC CATCCCGTTC CCCGTCGCCC CCGTCCCGCT GGGCAATGCC CCGAACATCA CCACCCTCAT CCCCGAAGGG CGCCTCCGCC TCCATCAGCA GCATGAGTGA AGGTGACGAG GACGAGAAGT GA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001076415.1 |
CDS | 105..1136 |
Translation | |
Target ORF information:
RefSeq Version | NM_001082946.1 |
Organism | Danio rerio(zebrafish) |
Definition | Danio rerio phosphate cytidylyltransferase 1, choline, beta a (pcyt1ba), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001082946.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGGAGGAGC TGGAACATAC CTGTCCGCTG CCACGAACGA CTCTTATAGA ACCGGCCATA TTTACTCCAG AGACGAGTTG TGAGTGTCGA GCGCCACATG AAAAGCTGAC TGTAGATCAA GCTAGCCATG GAACGCCAGT GGACCGACCG GTGCGAGTCT ACGCAGATGG CATCTTCGAT CTCTTTCATT CCGGTCACGC TCGTGCCCTC ATGCAGGCTA AGAATCTGTT CCCCAACACC TACCTTATAG TTGGAGTATG CAGCGATGAA CTTACACACA AGTACAAGGG CTTCACCGTC ATGACAGAAG ACGAGCGCTA TGAGGCATTA AGACACTGCC GATACGTCGA CGAGGTTTTG CGCGATGCTC CTTGGACTCT GACACAAGAC TTTTTAGAAA AACACAAGAT TGACTTTGTG GCACACGATG ACATCCCATA CTCCTCCGCT GGATCTGAGG ATGTGTACAA GCATATTAAG GAGGCAGGTA TGTTTGTGCC CACTAAAAGG ACAGAAGGGA TCTCTACGTC TGACCTGATC ACCCGGATAG TGAGAGACTA TGACGTCTAT GCTAGACGCA ACCTGCAGAG GGGCTACACC GCTAAAGAAC TGAACGTCAG TTACATTAAT GAGAAGAAGT ATCGTCTGCA GAATCAGGTG GACAGAATGA AGGAAAAAGT GCGGACCGTA GAGGAAAAGT CAAAGCACTT TGTGTACCGA GTGGAGGAGA AGAGCCATGA TCTGATCCAG AAGTGGGAAG AGAAATCAAG AGAGTTCATT GGGAATTTCC TGGAGCTCTT TGGCCCAGAT GGAACATGGA AGCAGATGTT TCAGGAGAGA AGCGGCCGTA TGATTCAGGC CTTTTCACCA CGTGGCTCAC CCAGCAGCAG CCCTCCAAGG GACTTTTCTC CATCCCGTTC CCCGTCGCCC CCGTCCCGCT GGGCAATGCC CCGAACATCA CCACCCTCAT CCCCGAAGGG CGCCTCCGCC TCCATCAGCA GCATGAGTGA AGGTGACGAG GACGAGAAGT GA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
ODa28506 |
Clone ID Related Accession (Same CDS sequence) |
XM_005162665.4
, XM_005162665.3
|
Accession Version |
XM_005162665.4 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1005bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2017-06-14 |
Organism |
Danio rerio(zebrafish) |
Product |
choline-phosphate cytidylyltransferase B isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007135.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jun 15, 2017 this sequence version replaced XM_005162665.3.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Danio rerio Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.4
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961
| ATGGAGGAGC TGGAACATAC CTGTCCGCTG CCACGAACGA CTCTTATAGA ACCGGCCATA TTTACTCCAG AGACGAGTTG TGAGTGTCGA GCGCCACATG AAAAGCTGAC TGTAGATCAA GCTAGCCATG GAACGCCAGT GGACCGACCG GTGCGAGTCT ACGCAGATGG CATCTTCGAT CTCTTTCATT CCGGTCACGC TCGTGCCCTC ATGCAGGCTA AGAATCTGTT CCCCAACACC TACCTTATAG TTGGAGTATG CAGCGATGAA CTTACACACA AGTACAAGGG CTTCACCGTC ATGACAGAAG ACGAGCGCTA TGAGGCATTA AGACACTGCC GATACGTCGA CGAGGTTTTG CGCGATGCTC CTTGGACTCT GACACAAGAC TTTTTAGAAA AACACAAGAT TGACTTTGTG GCACACGATG ACATCCCATA CTCCTCCGCT GGATCTGAGG ATGTGTACAA GCATATTAAG GAGGCAGAAG GGATCTCTAC GTCTGACCTG ATCACCCGGA TAGTGAGAGA CTATGACGTC TATGCTAGAC GCAACCTGCA GAGGGGCTAC ACCGCTAAAG AACTGAACGT CAGTTACATT AATGAGAAGA AGTATCGTCT GCAGAATCAG GTGGACAGAA TGAAGGAAAA AGTGCGGACC GTAGAGGAAA AGTCAAAGCA CTTTGTGTAC CGAGTGGAGG AGAAGAGCCA TGATCTGATC CAGAAGTGGG AAGAGAAATC AAGAGAGTTC ATTGGGAATT TCCTGGAGCT CTTTGGCCCA GATGGAACAT GGAAGCAGAT GTTTCAGGAG AGAAGCGGCC GTATGATTCA GGCCTTTTCA CCACGTGGCT CACCCAGCAG CAGCCCTCCA AGGGACTTTT CTCCATCCCG TTCCCCGTCG CCCCCGTCCC GCTGGGCAAT GCCCCGAACA TCACCACCCT CATCCCCGAA GGGCGCCTCC GCCTCCATCA GCAGCATGAG TGAAGGTGAC GAGGACGAGA AGTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_005162722.1 |
CDS | 1182..2186 |
Translation | |
Target ORF information:
RefSeq Version | XM_005162665.4 |
Organism | Danio rerio(zebrafish) |
Definition | Danio rerio phosphate cytidylyltransferase 1, choline, beta a (pcyt1ba), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_005162665.4 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961
| ATGGAGGAGC TGGAACATAC CTGTCCGCTG CCACGAACGA CTCTTATAGA ACCGGCCATA TTTACTCCAG AGACGAGTTG TGAGTGTCGA GCGCCACATG AAAAGCTGAC TGTAGATCAA GCTAGCCATG GAACGCCAGT GGACCGACCG GTGCGAGTCT ACGCAGATGG CATCTTCGAT CTCTTTCATT CCGGTCACGC TCGTGCCCTC ATGCAGGCTA AGAATCTGTT CCCCAACACC TACCTTATAG TTGGAGTATG CAGCGATGAA CTTACACACA AGTACAAGGG CTTCACCGTC ATGACAGAAG ACGAGCGCTA TGAGGCATTA AGACACTGCC GATACGTCGA CGAGGTTTTG CGCGATGCTC CTTGGACTCT GACACAAGAC TTTTTAGAAA AACACAAGAT TGACTTTGTG GCACACGATG ACATCCCATA CTCCTCCGCT GGATCTGAGG ATGTGTACAA GCATATTAAG GAGGCAGAAG GGATCTCTAC GTCTGACCTG ATCACCCGGA TAGTGAGAGA CTATGACGTC TATGCTAGAC GCAACCTGCA GAGGGGCTAC ACCGCTAAAG AACTGAACGT CAGTTACATT AATGAGAAGA AGTATCGTCT GCAGAATCAG GTGGACAGAA TGAAGGAAAA AGTGCGGACC GTAGAGGAAA AGTCAAAGCA CTTTGTGTAC CGAGTGGAGG AGAAGAGCCA TGATCTGATC CAGAAGTGGG AAGAGAAATC AAGAGAGTTC ATTGGGAATT TCCTGGAGCT CTTTGGCCCA GATGGAACAT GGAAGCAGAT GTTTCAGGAG AGAAGCGGCC GTATGATTCA GGCCTTTTCA CCACGTGGCT CACCCAGCAG CAGCCCTCCA AGGGACTTTT CTCCATCCCG TTCCCCGTCG CCCCCGTCCC GCTGGGCAAT GCCCCGAACA TCACCACCCT CATCCCCGAA GGGCGCCTCC GCCTCCATCA GCAGCATGAG TGAAGGTGAC GAGGACGAGA AGTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
ODa28506 |
Clone ID Related Accession (Same CDS sequence) |
XM_005162665.4
, XM_005162665.3
|
Accession Version |
XM_005162665.3 |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1005bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-06-23 |
Organism |
Danio rerio(Zebrafish) |
Product |
choline-phosphate cytidylyltransferase B isoform X1 |
Comment |
MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007135.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jun 24, 2016 this sequence version replaced XM_005162665.2.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Danio rerio Annotation Release 105
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961
| ATGGAGGAGC TGGAACATAC CTGTCCGCTG CCACGAACGA CTCTTATAGA ACCGGCCATA TTTACTCCAG AGACGAGTTG TGAGTGTCGA GCGCCACATG AAAAGCTGAC TGTAGATCAA GCTAGCCATG GAACGCCAGT GGACCGACCG GTGCGAGTCT ACGCAGATGG CATCTTCGAT CTCTTTCATT CCGGTCACGC TCGTGCCCTC ATGCAGGCTA AGAATCTGTT CCCCAACACC TACCTTATAG TTGGAGTATG CAGCGATGAA CTTACACACA AGTACAAGGG CTTCACCGTC ATGACAGAAG ACGAGCGCTA TGAGGCATTA AGACACTGCC GATACGTCGA CGAGGTTTTG CGCGATGCTC CTTGGACTCT GACACAAGAC TTTTTAGAAA AACACAAGAT TGACTTTGTG GCACACGATG ACATCCCATA CTCCTCCGCT GGATCTGAGG ATGTGTACAA GCATATTAAG GAGGCAGAAG GGATCTCTAC GTCTGACCTG ATCACCCGGA TAGTGAGAGA CTATGACGTC TATGCTAGAC GCAACCTGCA GAGGGGCTAC ACCGCTAAAG AACTGAACGT CAGTTACATT AATGAGAAGA AGTATCGTCT GCAGAATCAG GTGGACAGAA TGAAGGAAAA AGTGCGGACC GTAGAGGAAA AGTCAAAGCA CTTTGTGTAC CGAGTGGAGG AGAAGAGCCA TGATCTGATC CAGAAGTGGG AAGAGAAATC AAGAGAGTTC ATTGGGAATT TCCTGGAGCT CTTTGGCCCA GATGGAACAT GGAAGCAGAT GTTTCAGGAG AGAAGCGGCC GTATGATTCA GGCCTTTTCA CCACGTGGCT CACCCAGCAG CAGCCCTCCA AGGGACTTTT CTCCATCCCG TTCCCCGTCG CCCCCGTCCC GCTGGGCAAT GCCCCGAACA TCACCACCCT CATCCCCGAA GGGCGCCTCC GCCTCCATCA GCAGCATGAG TGAAGGTGAC GAGGACGAGA AGTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_005162722.1 |
CDS | 1194..2198 |
Translation | |
Target ORF information:
RefSeq Version | XM_005162665.3 |
Organism | Danio rerio(Zebrafish) |
Definition | Danio rerio phosphate cytidylyltransferase 1, choline, beta a (pcyt1ba), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_005162665.3 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961
| ATGGAGGAGC TGGAACATAC CTGTCCGCTG CCACGAACGA CTCTTATAGA ACCGGCCATA TTTACTCCAG AGACGAGTTG TGAGTGTCGA GCGCCACATG AAAAGCTGAC TGTAGATCAA GCTAGCCATG GAACGCCAGT GGACCGACCG GTGCGAGTCT ACGCAGATGG CATCTTCGAT CTCTTTCATT CCGGTCACGC TCGTGCCCTC ATGCAGGCTA AGAATCTGTT CCCCAACACC TACCTTATAG TTGGAGTATG CAGCGATGAA CTTACACACA AGTACAAGGG CTTCACCGTC ATGACAGAAG ACGAGCGCTA TGAGGCATTA AGACACTGCC GATACGTCGA CGAGGTTTTG CGCGATGCTC CTTGGACTCT GACACAAGAC TTTTTAGAAA AACACAAGAT TGACTTTGTG GCACACGATG ACATCCCATA CTCCTCCGCT GGATCTGAGG ATGTGTACAA GCATATTAAG GAGGCAGAAG GGATCTCTAC GTCTGACCTG ATCACCCGGA TAGTGAGAGA CTATGACGTC TATGCTAGAC GCAACCTGCA GAGGGGCTAC ACCGCTAAAG AACTGAACGT CAGTTACATT AATGAGAAGA AGTATCGTCT GCAGAATCAG GTGGACAGAA TGAAGGAAAA AGTGCGGACC GTAGAGGAAA AGTCAAAGCA CTTTGTGTAC CGAGTGGAGG AGAAGAGCCA TGATCTGATC CAGAAGTGGG AAGAGAAATC AAGAGAGTTC ATTGGGAATT TCCTGGAGCT CTTTGGCCCA GATGGAACAT GGAAGCAGAT GTTTCAGGAG AGAAGCGGCC GTATGATTCA GGCCTTTTCA CCACGTGGCT CACCCAGCAG CAGCCCTCCA AGGGACTTTT CTCCATCCCG TTCCCCGTCG CCCCCGTCCC GCTGGGCAAT GCCCCGAACA TCACCACCCT CATCCCCGAA GGGCGCCTCC GCCTCCATCA GCAGCATGAG TGAAGGTGAC GAGGACGAGA AGTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
ODa151649 |
Clone ID Related Accession (Same CDS sequence) |
XM_021470092.1
|
Accession Version |
XM_021470092.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 948bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2017-06-14 |
Organism |
Danio rerio(zebrafish) |
Product |
choline-phosphate cytidylyltransferase B isoform X2 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007135.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Danio rerio Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.4
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901
| ATGAAGCTAA AATACAGCTC ATCACCAAGT AATGAATACC AAGTCAAAAA AACAATGGAC CGACCGGTGC GAGTCTACGC AGATGGCATC TTCGATCTCT TTCATTCCGG TCACGCTCGT GCCCTCATGC AGGCTAAGAA TCTGTTCCCC AACACCTACC TTATAGTTGG AGTATGCAGC GATGAACTTA CACACAAGTA CAAGGGCTTC ACCGTCATGA CAGAAGACGA GCGCTATGAG GCATTAAGAC ACTGCCGATA CGTCGACGAG GTTTTGCGCG ATGCTCCTTG GACTCTGACA CAAGACTTTT TAGAAAAACA CAAGATTGAC TTTGTGGCAC ACGATGACAT CCCATACTCC TCCGCTGGAT CTGAGGATGT GTACAAGCAT ATTAAGGAGG CAGGTATGTT TGTGCCCACT AAAAGGACAG AAGGGATCTC TACGTCTGAC CTGATCACCC GGATAGTGAG AGACTATGAC GTCTATGCTA GACGCAACCT GCAGAGGGGC TACACCGCTA AAGAACTGAA CGTCAGTTAC ATTAATGAGA AGAAGTATCG TCTGCAGAAT CAGGTGGACA GAATGAAGGA AAAAGTGCGG ACCGTAGAGG AAAAGTCAAA GCACTTTGTG TACCGAGTGG AGGAGAAGAG CCATGATCTG ATCCAGAAGT GGGAAGAGAA ATCAAGAGAG TTCATTGGGA ATTTCCTGGA GCTCTTTGGC CCAGATGGAA CATGGAAGCA GATGTTTCAG GAGAGAAGCG GCCGTATGAT TCAGGCCTTT TCACCACGTG GCTCACCCAG CAGCAGCCCT CCAAGGGACT TTTCTCCATC CCGTTCCCCG TCGCCCCCGT CCCGCTGGGC AATGCCCCGA ACATCACCAC CCTCATCCCC GAAGGGCGCC TCCGCCTCCA TCAGCAGCAT GAGTGAAGGT GACGAGGACG AGAAGTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_021325767.1 |
CDS | 133..1080 |
Translation | |
Target ORF information:
RefSeq Version | XM_021470092.1 |
Organism | Danio rerio(zebrafish) |
Definition | Danio rerio phosphate cytidylyltransferase 1, choline, beta a (pcyt1ba), transcript variant X2, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_021470092.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901
| ATGAAGCTAA AATACAGCTC ATCACCAAGT AATGAATACC AAGTCAAAAA AACAATGGAC CGACCGGTGC GAGTCTACGC AGATGGCATC TTCGATCTCT TTCATTCCGG TCACGCTCGT GCCCTCATGC AGGCTAAGAA TCTGTTCCCC AACACCTACC TTATAGTTGG AGTATGCAGC GATGAACTTA CACACAAGTA CAAGGGCTTC ACCGTCATGA CAGAAGACGA GCGCTATGAG GCATTAAGAC ACTGCCGATA CGTCGACGAG GTTTTGCGCG ATGCTCCTTG GACTCTGACA CAAGACTTTT TAGAAAAACA CAAGATTGAC TTTGTGGCAC ACGATGACAT CCCATACTCC TCCGCTGGAT CTGAGGATGT GTACAAGCAT ATTAAGGAGG CAGGTATGTT TGTGCCCACT AAAAGGACAG AAGGGATCTC TACGTCTGAC CTGATCACCC GGATAGTGAG AGACTATGAC GTCTATGCTA GACGCAACCT GCAGAGGGGC TACACCGCTA AAGAACTGAA CGTCAGTTAC ATTAATGAGA AGAAGTATCG TCTGCAGAAT CAGGTGGACA GAATGAAGGA AAAAGTGCGG ACCGTAGAGG AAAAGTCAAA GCACTTTGTG TACCGAGTGG AGGAGAAGAG CCATGATCTG ATCCAGAAGT GGGAAGAGAA ATCAAGAGAG TTCATTGGGA ATTTCCTGGA GCTCTTTGGC CCAGATGGAA CATGGAAGCA GATGTTTCAG GAGAGAAGCG GCCGTATGAT TCAGGCCTTT TCACCACGTG GCTCACCCAG CAGCAGCCCT CCAAGGGACT TTTCTCCATC CCGTTCCCCG TCGCCCCCGT CCCGCTGGGC AATGCCCCGA ACATCACCAC CCTCATCCCC GAAGGGCGCC TCCGCCTCCA TCAGCAGCAT GAGTGAAGGT GACGAGGACG AGAAGTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J |
 |
RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R |