chia.5 cDNA ORF clone, Danio rerio(zebrafish)
| Gene Symbol | chia.5 |
| Entrez Gene ID | 100003900 |
| Full Name | chitinase, acidic.5 |
| Synonyms | zgc:173927 |
| General protein information |
|
| Gene Type | protein-coding |
| Organism | Danio rerio(zebrafish) |
mRNA and Protein(s)
| mRNA | Protein | Name |
|---|---|---|
| NM_001110041.3 | NP_001103511.2 | uncharacterized protein LOC100003900 precursor |
| Danio rerio (zebrafish) | zgc:65788 | NP_955897.2 |
| Danio rerio (zebrafish) | chia.4 | NP_956740.1 |
| Magnaporthe oryzae (rice blast fungus) | MGG_01247 | XP_003714154.1 |
| Bos taurus (cattle) | CHIA | NP_777124.1 |
| Gallus gallus (chicken) | CHIA | NP_989760.1 |
| Danio rerio (zebrafish) | chia.3 | NP_998378.1 |
| Homo sapiens (human) | CHIA | NP_970615.2 |
| Xenopus tropicalis (tropical clawed frog) | chia | NP_001186489.1 |
| CHIA | XP_001104487.1 | |
| Canis lupus familiaris (dog) | CHIA | XP_537030.3 |
| Mus musculus (house mouse) | Chia1 | NP_075675.2 |
| Rattus norvegicus (Norway rat) | Chia | NP_997469.1 |
| Danio rerio (zebrafish) | zgc:173927 | NP_001103511.1 |
| Neurospora crassa | NCU03209 | XP_965309.2 |
Related articles in PubMed
Spatial and temporal expression patterns of chitinase genes in developing zebrafish embryos.
Koch BE, Stougaard J, Spaink HP
Gene expression patterns : GEP14(2)69-77(2014 Mar)
New paralogues and revised time line in the expansion of the vertebrate GH18 family.
Hussain M, Wilson JB
Journal of molecular evolution76(4)240-60(2013 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following chia.5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the chia.5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | ODa47857 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001110041.3 | |
| Accession Version | NM_001110041.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1446bp) Protein sequence SNP |
|
| Vector | pcDNA3.1+/C-(K)DYK or customized vector |  User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-11-09 | |
| Organism | Danio rerio(zebrafish) | |
| Product | uncharacterized protein LOC100003900 precursor | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CU234171.6. On Jun 18, 2015 this sequence version replaced NM_001110041.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments of non-reference strain transcripts. ##Evidence-Data-START## Transcript exon combination :: BC153462.1, GDQH01003421.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476821, SAMN06350657 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGAGCAGAT TCATTTTTAT AGCCAGCTTT TCACTGGCAT TGTGTCACTT TGGATTGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001103511.2 |
| CDS | 44..1489 |
| Translation |
Target ORF information:
Target ORF information:
|
 NM_001110041.3 |
ORF Insert Sequence:
1 | ATGAGCAGAT TCATTTTTAT AGCCAGCTTT TCACTGGCAT TGTGTCACTT TGGATTGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
Spatial and temporal expression patterns of chitinase genes in developing zebrafish embryos. |
|
New paralogues and revised time line in the expansion of the vertebrate GH18 family. |