Gene Symbol | si:dkey-97m3.1 |
Entrez Gene ID | 100034578 |
Full Name | si:dkey-97m3.1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » si:dkey-97m3.1 cDNA ORF clone
Gene Symbol | si:dkey-97m3.1 |
Entrez Gene ID | 100034578 |
Full Name | si:dkey-97m3.1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_005164445.3 | XP_005164502.1 | fatty acyl-CoA reductase 1 isoform X1 |
XM_009299940.2 | XP_009298215.1 | fatty acyl-CoA reductase 1 isoform X2 |
NM_001083089.1 | NP_001076558.1 | fatty acyl-CoA reductase 1 |
XM_005164445.4 | XP_005164502.1 | fatty acyl-CoA reductase 1 isoform X1 |
XM_009299940.3 | XP_009298215.1 | fatty acyl-CoA reductase 1 isoform X2 |
Pan troglodytes (chimpanzee) | FAR1 | XP_001171908.1 |
FAR1 | XP_001093916.1 | |
Drosophila melanogaster (fruit fly) | CG1443 | NP_651652.2 |
Homo sapiens (human) | FAR1 | NP_115604.1 |
Canis lupus familiaris (dog) | FAR1 | XP_534066.3 |
Mus musculus (house mouse) | Far1 | NP_081655.2 |
Gallus gallus (chicken) | FAR1 | NP_001026350.1 |
Danio rerio (zebrafish) | si:dkey-97m3.1 | NP_001076558.1 |
Arabidopsis thaliana (thale cress) | FAR5 | NP_190041.2 |
Arabidopsis thaliana (thale cress) | FAR4 | NP_190040.3 |
Arabidopsis thaliana (thale cress) | FAR7 | NP_197634.1 |
Oryza sativa (rice) | Os04g0354600 | NP_001052541.1 |
Arabidopsis thaliana (thale cress) | FAR1 | NP_197642.1 |
Arabidopsis thaliana (thale cress) | CER4 | NP_567936.5 |
Oryza sativa (rice) | Os08g0557800 | NP_001062488.1 |
Oryza sativa (rice) | Os04g0354400 | NP_001052540.1 |
Rattus norvegicus (Norway rat) | Far1 | NP_001011933.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP011736 | XP_320774.4 |
Bos taurus (cattle) | FAR1 | NP_001092502.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_02787 | XP_003720954.1 |
Arabidopsis thaliana (thale cress) | FAR8 | NP_190042.2 |
Oryza sativa (rice) | Os09g0567500 | NP_001063962.1 |
Xenopus tropicalis (tropical clawed frog) | far1 | NP_001090856.1 |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following si:dkey-97m3.1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the si:dkey-97m3.1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa09019 | |
Clone ID Related Accession (Same CDS sequence) | XM_005164445.3 , NM_001083089.1 , XM_005164445.4 | |
Accession Version | NM_001083089.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1548bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-11-23 | |
Organism | Danio rerio(zebrafish) | |
Product | fatty acyl-CoA reductase 1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CR749743.13. ##Evidence-Data-START## CDS exon combination :: GDQH01023326.1, GFIL01037773.1 [ECO:0000331] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGGGTCGA TCTCGGAGTG GTACGCGGGG AAGAACGTGC TGATCACGGG TGCCACAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001076558.1 |
CDS | 1..1548 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001083089.1 |
1 | ATGGGGTCGA TCTCGGAGTG GTACGCGGGG AAGAACGTGC TGATCACGGG TGCCACAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa09019 | |
Clone ID Related Accession (Same CDS sequence) | XM_005164445.3 , NM_001083089.1 , XM_005164445.4 | |
Accession Version | XM_005164445.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1548bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | fatty acyl-CoA reductase 1 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007115.6) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005164445.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGTCGA TCTCGGAGTG GTACGCGGGG AAGAACGTGC TGATCACGGG TGCCACAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005164502.1 |
CDS | 1287..2834 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005164445.3 |
1 | ATGGGGTCGA TCTCGGAGTG GTACGCGGGG AAGAACGTGC TGATCACGGG TGCCACAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa09019 | |
Clone ID Related Accession (Same CDS sequence) | XM_005164445.3 , NM_001083089.1 , XM_005164445.4 | |
Accession Version | XM_005164445.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1548bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | fatty acyl-CoA reductase 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007115.7) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005164445.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGTCGA TCTCGGAGTG GTACGCGGGG AAGAACGTGC TGATCACGGG TGCCACAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005164502.1 |
CDS | 221..1768 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005164445.4 |
1 | ATGGGGTCGA TCTCGGAGTG GTACGCGGGG AAGAACGTGC TGATCACGGG TGCCACAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa48395 | |
Clone ID Related Accession (Same CDS sequence) | XM_009299940.2 , XM_009299940.3 | |
Accession Version | XM_009299940.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1290bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | fatty acyl-CoA reductase 1 isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007115.6) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009299940.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCAGCCCG GTCTGGCCAT CAGTGCACAA GATGTAGAAA CACTCACTTC CCGTGTGCAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009298215.1 |
CDS | 614..1903 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009299940.2 |
1 | ATGCAGCCCG GTCTGGCCAT CAGTGCACAA GATGTAGAAA CACTCACTTC CCGTGTGCAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa48395 | |
Clone ID Related Accession (Same CDS sequence) | XM_009299940.2 , XM_009299940.3 | |
Accession Version | XM_009299940.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1290bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | fatty acyl-CoA reductase 1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007115.7) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_009299940.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCAGCCCG GTCTGGCCAT CAGTGCACAA GATGTAGAAA CACTCACTTC CCGTGTGCAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009298215.1 |
CDS | 598..1887 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009299940.3 |
1 | ATGCAGCCCG GTCTGGCCAT CAGTGCACAA GATGTAGAAA CACTCACTTC CCGTGTGCAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
RFX transcription factors are essential for hearing in mice. |