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ggact.3 cDNA ORF clone, Danio rerio(zebrafish)

Summary

Gene Symbol ggact.3
Entrez Gene ID 100038780
Full Name gamma-glutamylamine cyclotransferase, tandem duplicate 3
Synonyms GGACT,GGACT B,GGACT C,zgc:162208
General protein information
Preferred Names

gamma-glutamylamine cyclotransferase, tandem duplicate 3

Names

gamma-glutamylaminecyclotransferase C
AIG2-like domain-containing protein 1-B
AIG2-like domain-containing protein 1-C
UPF0131 protein B
gamma-glutamylamine cyclotransferase C
gamma-glutamylaminecyclotransferase B
Gene Type protein-coding
Organism Danio rerio(zebrafish)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_005168295.2 XP_005168352.1 gamma-glutamylaminecyclotransferase C isoform X1
XM_005168295.1 XP_005168352.1 gamma-glutamylaminecyclotransferase C isoform X1
NM_001089560.1 NP_001083029.1 gamma-glutamylaminecyclotransferase C

Pathways from BioSystems


Homologies


Homo sapiens (human) GGACT NP_149101.1
Canis lupus familiaris (dog) GGACT XP_005634110.1
Bos taurus (cattle) GGACT NP_001069039.1
Danio rerio (zebrafish) ggact.2 NP_001004544.1
Danio rerio (zebrafish) ggact.1 NP_001071185.1
Drosophila melanogaster (fruit fly) CG2811 NP_001246514.1
Danio rerio (zebrafish) ggact.3 NP_001083029.1
Caenorhabditis elegans (roundworm) F42A10.9 NP_001022574.1
GGACT XP_002800863.1
Gallus gallus (chicken) A2LD1 XP_004938623.1
Pan troglodytes (chimpanzee) GGACT XP_003314249.1
Mus musculus (house mouse) Ggact NP_663441.1
Rattus norvegicus (Norway rat) Ggact NP_001020805.1
Anopheles gambiae (African malaria mosquito) AgaP_AGAP010682 XP_311398.3
Xenopus tropicalis (tropical clawed frog) ggact XP_002937126.1

Gene Ontology


Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following ggact.3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ggact.3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa38710 NM_001089560.1
Latest version!		 Danio rerio gamma-glutamylamine cyclotransferase, tandem duplicate 3 (ggact.3), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $104.30
$149.00
ODa05367 XM_005168295.2
Latest version!		 Danio rerio gamma-glutamylamine cyclotransferase, tandem duplicate 3 (ggact.3), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $104.30
$149.00
View Old Accession Versions >>
ODa05367 XM_005168295.1 Danio rerio gamma-glutamylamine cyclotransferase, tandem duplicate 3 (ggact.3), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $104.30
$149.00
Hide Old Accession Versions >>

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID ODa38710
Clone ID Related Accession (Same CDS sequence) NM_001089560.1
Accession Version NM_001089560.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 459bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2017-10-30
Organism Danio rerio(zebrafish)
Product gamma-glutamylaminecyclotransferase C
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC133906.1. ##Evidence-Data-START## Transcript exon combination :: BC133906.1, EH440779.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
ATGAGCACCC ATCATGTATT TGTGTACGGC TCACTAAAGA AAGGCCAGCC AAACCACCAC 
GAACTCTTGA ACTCTAACAA TGGTCAAGCT GAGTTCATCA CCTGCGCCCA GACCAAAGAG 
CCATACCCGC TGGTTATTGC CACCAAACAC AACATTCCTT TTCTGCTGAA TGTGCCCGGC 
TCTGGAAAGC AGGTCTCTGG TGAGATCTAC AGCGTTGACC AGAAGATGCT GGAGTTCCTG 
GACTGGTTTG AGAAATGTCC AGACTGGTAC CAGCGCACTT CCATCCAGCT GGAGATCCTA 
AAGGGGAATG GAGAATCTGG AAGAATTGAG GAGGCTTCTG TCTACAGCAA AATAAATTTT 
GAACCCGACT GGCTCAACAA GCCCACACAT GAAAGTTATG ATACCAATGG TGACCATGGA 
CTGAAATTTG TGTGTCGAGA AGACAGGAAA GATGATTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001083029.1
CDS72..530
Misc Feature(1)87..416
Misc Feature(2)order(87..89,96..98,102..107,318..323,339..341)
Misc Feature(3)96..107
Misc Feature(4)order(243..248,252..254,339..353,357..359,408..410)
Misc Feature(5)321..323
Translation

Target ORF information:

RefSeq Version NM_001089560.1
Organism Danio rerio(zebrafish)
Definition Danio rerio gamma-glutamylamine cyclotransferase, tandem duplicate 3 (ggact.3), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001089560.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
ATGAGCACCC ATCATGTATT TGTGTACGGC TCACTAAAGA AAGGCCAGCC AAACCACCAC 
GAACTCTTGA ACTCTAACAA TGGTCAAGCT GAGTTCATCA CCTGCGCCCA GACCAAAGAG 
CCATACCCGC TGGTTATTGC CACCAAACAC AACATTCCTT TTCTGCTGAA TGTGCCCGGC 
TCTGGAAAGC AGGTCTCTGG TGAGATCTAC AGCGTTGACC AGAAGATGCT GGAGTTCCTG 
GACTGGTTTG AGAAATGTCC AGACTGGTAC CAGCGCACTT CCATCCAGCT GGAGATCCTA 
AAGGGGAATG GAGAATCTGG AAGAATTGAG GAGGCTTCTG TCTACAGCAA AATAAATTTT 
GAACCCGACT GGCTCAACAA GCCCACACAT GAAAGTTATG ATACCAATGG TGACCATGGA 
CTGAAATTTG TGTGTCGAGA AGACAGGAAA GATGATTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ODa05367
Clone ID Related Accession (Same CDS sequence) XM_005168295.2 , XM_005168295.1
Accession Version XM_005168295.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 564bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2017-06-15
Organism Danio rerio(zebrafish)
Product gamma-glutamylaminecyclotransferase C isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007112.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005168295.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
ATGAAGTTGT TGATCAAACA TTCCGTGAGA CCTTCACGAA AGAAAGGATT TTTTTCAATA 
TTATCGGTCT TAGTCATGAA CAGTACAATG AATACTACAG TCAGCATGAG CACCCATCAT 
GTATTTGTGT ACGGCTCACT AAAGAAAGGC CAGCCAAACC ACCACGAACT CTTGAACTCT 
AACAATGGTC AAGCTGAGTT CATCACCTGC GCCCAGACCA AAGAGCCATA CCCGCTGGTT 
ATTGCCACCA AACACAACAT TCCTTTTCTG CTGAATGTGC CCGGCTCTGG AAAGCAGGTC 
TCTGGTGAGA TCTACAGCGT TGACCAGAAG ATGCTGGAGT TCCTGGACTG GTTTGAGAAA 
TGTCCAGACT GGTACCAGCG CACTTCCATC CAGCTGGAGA TCCTAAAGGG GAATGGAGAA 
TCTGGAAGAA TTGAGGAGGC TTCTGTCTAC AGCAAAATAA ATTTTGAACC CGACTGGCTC 
AACAAGCCCA CACATGAAAG TTATGATACC AATGGTGACC ATGGACTGAA ATTTGTGTGT 
CGAGAAGACA GGAAAGATGA TTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005168352.1
CDS122..685
Misc Feature(1)242..571
Misc Feature(2)order(242..244,251..253,257..262,473..478,494..496)
Misc Feature(3)order(398..403,407..409,494..508,512..514,563..565)
Misc Feature(4)476..478
Translation

Target ORF information:

RefSeq Version XM_005168295.2
Organism Danio rerio(zebrafish)
Definition Danio rerio gamma-glutamylamine cyclotransferase, tandem duplicate 3 (ggact.3), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_005168295.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
ATGAAGTTGT TGATCAAACA TTCCGTGAGA CCTTCACGAA AGAAAGGATT TTTTTCAATA 
TTATCGGTCT TAGTCATGAA CAGTACAATG AATACTACAG TCAGCATGAG CACCCATCAT 
GTATTTGTGT ACGGCTCACT AAAGAAAGGC CAGCCAAACC ACCACGAACT CTTGAACTCT 
AACAATGGTC AAGCTGAGTT CATCACCTGC GCCCAGACCA AAGAGCCATA CCCGCTGGTT 
ATTGCCACCA AACACAACAT TCCTTTTCTG CTGAATGTGC CCGGCTCTGG AAAGCAGGTC 
TCTGGTGAGA TCTACAGCGT TGACCAGAAG ATGCTGGAGT TCCTGGACTG GTTTGAGAAA 
TGTCCAGACT GGTACCAGCG CACTTCCATC CAGCTGGAGA TCCTAAAGGG GAATGGAGAA 
TCTGGAAGAA TTGAGGAGGC TTCTGTCTAC AGCAAAATAA ATTTTGAACC CGACTGGCTC 
AACAAGCCCA CACATGAAAG TTATGATACC AATGGTGACC ATGGACTGAA ATTTGTGTGT 
CGAGAAGACA GGAAAGATGA TTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ODa05367
Clone ID Related Accession (Same CDS sequence) XM_005168295.2 , XM_005168295.1
Accession Version XM_005168295.1 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 564bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-06-24
Organism Danio rerio(Zebrafish)
Product gamma-glutamylaminecyclotransferase C isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007112.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
ATGAAGTTGT TGATCAAACA TTCCGTGAGA CCTTCACGAA AGAAAGGATT TTTTTCAATA 
TTATCGGTCT TAGTCATGAA CAGTACAATG AATACTACAG TCAGCATGAG CACCCATCAT 
GTATTTGTGT ACGGCTCACT AAAGAAAGGC CAGCCAAACC ACCACGAACT CTTGAACTCT 
AACAATGGTC AAGCTGAGTT CATCACCTGC GCCCAGACCA AAGAGCCATA CCCGCTGGTT 
ATTGCCACCA AACACAACAT TCCTTTTCTG CTGAATGTGC CCGGCTCTGG AAAGCAGGTC 
TCTGGTGAGA TCTACAGCGT TGACCAGAAG ATGCTGGAGT TCCTGGACTG GTTTGAGAAA 
TGTCCAGACT GGTACCAGCG CACTTCCATC CAGCTGGAGA TCCTAAAGGG GAATGGAGAA 
TCTGGAAGAA TTGAGGAGGC TTCTGTCTAC AGCAAAATAA ATTTTGAACC CGACTGGCTC 
AACAAGCCCA CACATGAAAG TTATGATACC AATGGTGACC ATGGACTGAA ATTTGTGTGT 
CGAGAAGACA GGAAAGATGA TTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005168352.1
CDS27..590
Misc Feature(1)147..476
Misc Feature(2)order(147..149,156..158,162..167,378..383,399..401)
Misc Feature(3)order(303..308,312..314,399..413,417..419,468..470)
Misc Feature(4)381..383
Translation

Target ORF information:

RefSeq Version XM_005168295.1
Organism Danio rerio(Zebrafish)
Definition Danio rerio gamma-glutamylamine cyclotransferase, tandem duplicate 3 (ggact.3), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_005168295.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
ATGAAGTTGT TGATCAAACA TTCCGTGAGA CCTTCACGAA AGAAAGGATT TTTTTCAATA 
TTATCGGTCT TAGTCATGAA CAGTACAATG AATACTACAG TCAGCATGAG CACCCATCAT 
GTATTTGTGT ACGGCTCACT AAAGAAAGGC CAGCCAAACC ACCACGAACT CTTGAACTCT 
AACAATGGTC AAGCTGAGTT CATCACCTGC GCCCAGACCA AAGAGCCATA CCCGCTGGTT 
ATTGCCACCA AACACAACAT TCCTTTTCTG CTGAATGTGC CCGGCTCTGG AAAGCAGGTC 
TCTGGTGAGA TCTACAGCGT TGACCAGAAG ATGCTGGAGT TCCTGGACTG GTTTGAGAAA 
TGTCCAGACT GGTACCAGCG CACTTCCATC CAGCTGGAGA TCCTAAAGGG GAATGGAGAA 
TCTGGAAGAA TTGAGGAGGC TTCTGTCTAC AGCAAAATAA ATTTTGAACC CGACTGGCTC 
AACAAGCCCA CACATGAAAG TTATGATACC AATGGTGACC ATGGACTGAA ATTTGTGTGT 
CGAGAAGACA GGAAAGATGA TTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J