| Gene Symbol | comp |
| Entrez Gene ID | 100318854 |
| Full Name | cartilage oligomeric matrix protein |
| Synonyms | Tsp-4b,im:7154332,si:ch211-43f4.1,thbs5,wu:fb78h09 |
| General protein information |
|
| Gene Type | protein-coding |
| Organism | Danio rerio(zebrafish) |
The following comp gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the comp cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | ODa49116 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001326350.2 , NM_001326350.1 | |
| Accession Version | NM_001326350.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2250bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector |  User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-03-20 | |
| Organism | Danio rerio(zebrafish) | |
| Product | cartilage oligomeric matrix protein isoform 1 precursor | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from FQ976909.10. On Aug 16, 2018 this sequence version replaced NM_001326350.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. | |
1 | ATGCTGTGGA GTCTCTGCTT CAGCTGTTTC TTCTATCTGC ACAGCGCTCT GGTTTCTGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001313279.1 |
| CDS | 55..2304 |
| Translation |
Target ORF information:
Target ORF information:
|
 NM_001326350.2 |
1 | ATGCTGTGGA GTCTCTGCTT CAGCTGTTTC TTCTATCTGC ACAGCGCTCT GGTTTCTGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | ODa49116 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001326350.2 , NM_001326350.1 | |
| Accession Version | NM_001326350.1 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2250bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-08-05 | |
| Organism | Danio rerio(zebrafish) | |
| Product | cartilage oligomeric matrix protein precursor | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from FQ976909.10. On May 15, 2016 this sequence version replaced XM_009305818.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence because no single transcript was available for the full length of the gene. The extent of this transcript is supported by transcript alignments and orthologous data. ##Evidence-Data-START## CDS exon combination :: GFIL01013337.1 [ECO:0000331] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. | |
1 | ATGCTGTGGA GTCTCTGCTT CAGCTGTTTC TTCTATCTGC ACAGCGCTCT GGTTTCTGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001313279.1 |
| CDS | 55..2304 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001326350.1 |
1 | ATGCTGTGGA GTCTCTGCTT CAGCTGTTTC TTCTATCTGC ACAGCGCTCT GGTTTCTGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | ODa54245 | |
| Clone ID Related Accession (Same CDS sequence) | XM_017358194.2 , NM_001365303.1 , XM_017358194.1 | |
| Accession Version | NM_001365303.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2247bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-03-20 | |
| Organism | Danio rerio(zebrafish) | |
| Product | cartilage oligomeric matrix protein isoform 2 precursor | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from FQ976909.10. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END## ##RefSeq-Attributes-START## inferred exon combination :: based on alignments, homology ##RefSeq-Attributes-END## | |
1 | ATGCTGTGGA GTCTCTGCTT CAGCTGTTTC TTCTATCTGC ACAGCGCTCT GGTTTCTGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001352232.1 |
| CDS | 55..2301 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001365303.1 |
1 | ATGCTGTGGA GTCTCTGCTT CAGCTGTTTC TTCTATCTGC ACAGCGCTCT GGTTTCTGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | ODa54245 | |
| Clone ID Related Accession (Same CDS sequence) | XM_017358194.2 , NM_001365303.1 , XM_017358194.1 | |
| Accession Version | XM_017358194.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2247bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-06-14 | |
| Organism | Danio rerio(zebrafish) | |
| Product | cartilage oligomeric matrix protein isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007122.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_017358194.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCTGTGGA GTCTCTGCTT CAGCTGTTTC TTCTATCTGC ACAGCGCTCT GGTTTCTGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_017213683.1 |
| CDS | 120..2366 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_017358194.2 |
1 | ATGCTGTGGA GTCTCTGCTT CAGCTGTTTC TTCTATCTGC ACAGCGCTCT GGTTTCTGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | ODa54245 | |
| Clone ID Related Accession (Same CDS sequence) | XM_017358194.2 , NM_001365303.1 , XM_017358194.1 | |
| Accession Version | XM_017358194.1 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2247bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-06-23 | |
| Organism | Danio rerio(Zebrafish) | |
| Product | cartilage oligomeric matrix protein isoform X1 | |
| Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007122.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCTGTGGA GTCTCTGCTT CAGCTGTTTC TTCTATCTGC ACAGCGCTCT GGTTTCTGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_017213683.1 |
| CDS | 172..2418 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_017358194.1 |
1 | ATGCTGTGGA GTCTCTGCTT CAGCTGTTTC TTCTATCTGC ACAGCGCTCT GGTTTCTGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
sdf1 Expression reveals a source of perivascular-derived mesenchymal stem cells in zebrafish. |
Phylogenomic analysis of vertebrate thrombospondins reveals fish-specific paralogues, ancestral gene relationships and a tetrapod innovation. |
