Gene Symbol | ddx55 |
Entrez Gene ID | 286745 |
Full Name | DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 |
Synonyms | chunp6861,fc32a12,kiaa1595,wu:fc32a12 |
General protein information |
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Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » ddx55 cDNA ORF clone
gRNAs
Gene Symbol | ddx55 |
Entrez Gene ID | 286745 |
Full Name | DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 |
Synonyms | chunp6861,fc32a12,kiaa1595,wu:fc32a12 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_017357925.1 | XP_017213414.1 | ATP-dependent RNA helicase DDX55 isoform X1 |
NM_173229.2 | NP_775336.2 | ATP-dependent RNA helicase DDX55 |
Homo sapiens (human) | DDX55 | NP_065987.1 |
Pan troglodytes (chimpanzee) | DDX55 | XP_001170267.1 |
Mus musculus (house mouse) | Ddx55 | NP_080685.2 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP001223 | XP_321934.5 |
Neurospora crassa | NCU03380 | XP_956827.1 |
Xenopus tropicalis (tropical clawed frog) | ddx55 | NP_001120242.1 |
Bos taurus (cattle) | DDX55 | NP_001039472.1 |
Rattus norvegicus (Norway rat) | Ddx55 | NP_001258255.1 |
Kluyveromyces lactis | KLLA0E14367g | XP_454597.1 |
Eremothecium gossypii | AGOS_AGL004C | NP_986662.1 |
Saccharomyces cerevisiae (baker's yeast) | SPB4 | NP_116654.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_02417 | XP_003709203.1 |
Arabidopsis thaliana (thale cress) | AT5G05450 | NP_196164.1 |
Arabidopsis thaliana (thale cress) | AT1G71370 | NP_177293.1 |
Oryza sativa (rice) | Os01g0164500 | NP_001042102.1 |
DDX55 | XP_002798866.1 | |
Canis lupus familiaris (dog) | DDX55 | XP_543371.2 |
Arabidopsis thaliana (thale cress) | AT1G71280 | NP_177284.1 |
Gallus gallus (chicken) | DDX55 | NP_001006185.1 |
Danio rerio (zebrafish) | ddx55 | NP_775336.1 |
Drosophila melanogaster (fruit fly) | CG9630 | NP_649777.1 |
Schizosaccharomyces pombe (fission yeast) | SPBC24C6.02 | NP_595956.1 |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)
Evolution of JAK-STAT pathway components: mechanisms and role in immune system development.
Liongue C, O'Sullivan LA, Trengove MC, Ward AC
PloS one7(3)e32777(2012)
Insertional mutagenesis in zebrafish rapidly identifies genes essential for early vertebrate development.
Golling G, Amsterdam A, Sun Z, Antonelli M, Maldonado E, Chen W, Burgess S, Haldi M, Artzt K, Farrington S, Lin SY, Nissen RM, Hopkins N
Nature genetics31(2)135-40(2002 Jun)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following ddx55 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ddx55 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa53998 | |
Clone ID Related Accession (Same CDS sequence) | XM_017357925.1 | |
Accession Version | XM_017357925.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1341bp) Protein sequence SNP |
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Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | ATP-dependent RNA helicase DDX55 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007121.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTTAGGA GGAAGGCTGA TGGACTTGAT TTGGCCACGG CTGTGAAGTC TCTAGATGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017213414.1 |
CDS | 185..1525 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTTTAGGA GGAAGGCTGA TGGACTTGAT TTGGCCACGG CTGTGAAGTC TCTAGATGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa98474 | |
Clone ID Related Accession (Same CDS sequence) | NM_173229.2 | |
Accession Version | NM_173229.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1782bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-11-23 | |
Organism | Danio rerio(zebrafish) | |
Product | ATP-dependent RNA helicase DDX55 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH508850.1, EH441837.1, CU570980.3, EH467724.1 and EH534985.1. On Sep 1, 2015 this sequence version replaced NM_173229.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AF506203.1, GFIL01008482.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAAAACA TTACCGATGG AAAATGGGGG AGTCTGCCGG TGAAATTACA TGACAACATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_775336.2 |
CDS | 82..1863 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGAAAACA TTACCGATGG AAAATGGGGG AGTCTGCCGG TGAAATTACA TGACAACATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
RFX transcription factors are essential for hearing in mice. |
Evolution of JAK-STAT pathway components: mechanisms and role in immune system development. |
Insertional mutagenesis in zebrafish rapidly identifies genes essential for early vertebrate development. |