chico cDNA ORF clone, Danio rerio(zebrafish)

  • Gene

  • Clones

  • gRNAs

The following chico gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the chico cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa07565 NM_130911.2
Latest version!
Danio rerio chico (chico), transcript variant 1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $104.30
$149.00
ODa07565 NM_001312685.1
Latest version!
Danio rerio chico (chico), transcript variant 2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $104.30
$149.00
ODa07566 XM_009298917.3
Latest version!
Danio rerio chico (chico), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $104.30
$149.00
View Old Accession Versions >>
ODa07566 XM_009298917.2 Danio rerio chico (chico), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $104.30
$149.00
Hide Old Accession Versions >>

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone 30% OFF
2-4 Clone 40% OFF
5 or more Clone 50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID ODa07565
    Clone ID Related Accession (Same CDS sequence) NM_130911.2 , NM_001312685.1
    Accession Version NM_130911.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 600bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-11-23
    Organism Danio rerio(zebrafish)
    Product chico
    Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CABZ01042148.1, CU571311.2 and CU570695.21. On Aug 18, 2015 this sequence version replaced NM_130911.1. Transcript Variant: This variant (1) represents the longer transcript. Variant 1 and 2 encode the same protein. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AF085218.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    ATGATGTTTC CACAAGCCAG GCACTCGGCT TCGTCTCAAT CGACACAGCC GCTGAAATTC 
    ACCACGTCAG ACTCTTGTGA TCGCATCAAG GATGAGTTTC AGTTCCTGCA GGCACAATAT
    CACAGCCTGA AGTTGGAATG TGATAAACTG GCAAGTGAGA AATCAGAAAT GCAGCGTCAT
    TACATAATGT ATTATGAGAT GTCGTATGGA CTCAACATCG AAATGCACAA ACAGGCGGAG
    ATTGTGAAGA GATTGAACGG GATCTGTGCT CAGGTGTTGC CGTACCTGTC TCAAGAGCAC
    CAGCAGCAGG TTCTAGGGGC GATTGAACGA GCCAAACAGG TCACCCCTCC TGAGATGAAC
    TCCATTATCC GGCAGCAGCT TCAGGTTCAC CAGCTCTCTC AGCTCCAGGG TTTGGCTTTA
    CCCATGACCC CTCTGCCCCT TGGCTTGACC CCACCGACCC TGCCCGCCGT CACCTCCAGC
    TCGGGCCTGC TGTCGCTGTC CAGCATCCTG GCCTCCCACG CACACCTCGC CAAAGAGGAC
    AAGAGCTCCC GCGACGCTGC CGACGGCCAC CGTGACGAGG ACGCAGACAA ATCCGACTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_570986.1
    CDS546..1145
    Translation

    Target ORF information:

    RefSeq Version NM_130911.2
    Organism Danio rerio(zebrafish)
    Definition Danio rerio chico (chico), transcript variant 1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    NM_130911.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    ATGATGTTTC CACAAGCCAG GCACTCGGCT TCGTCTCAAT CGACACAGCC GCTGAAATTC 
    ACCACGTCAG ACTCTTGTGA TCGCATCAAG GATGAGTTTC AGTTCCTGCA GGCACAATAT
    CACAGCCTGA AGTTGGAATG TGATAAACTG GCAAGTGAGA AATCAGAAAT GCAGCGTCAT
    TACATAATGT ATTATGAGAT GTCGTATGGA CTCAACATCG AAATGCACAA ACAGGCGGAG
    ATTGTGAAGA GATTGAACGG GATCTGTGCT CAGGTGTTGC CGTACCTGTC TCAAGAGCAC
    CAGCAGCAGG TTCTAGGGGC GATTGAACGA GCCAAACAGG TCACCCCTCC TGAGATGAAC
    TCCATTATCC GGCAGCAGCT TCAGGTTCAC CAGCTCTCTC AGCTCCAGGG TTTGGCTTTA
    CCCATGACCC CTCTGCCCCT TGGCTTGACC CCACCGACCC TGCCCGCCGT CACCTCCAGC
    TCGGGCCTGC TGTCGCTGTC CAGCATCCTG GCCTCCCACG CACACCTCGC CAAAGAGGAC
    AAGAGCTCCC GCGACGCTGC CGACGGCCAC CGTGACGAGG ACGCAGACAA ATCCGACTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID ODa07565
    Clone ID Related Accession (Same CDS sequence) NM_130911.2 , NM_001312685.1
    Accession Version NM_001312685.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 600bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-11-23
    Organism Danio rerio(zebrafish)
    Product chico
    Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CABZ01042148.1, CU571311.2 and CU570695.21. On Aug 18, 2015 this sequence version replaced XM_005171447.2. Transcript Variant: This variant (2) uses alternate splice sites in the 5' UTR compared to variant 1. Variants 1 and 2 encode the same protein. ##Evidence-Data-START## Transcript exon combination :: BC097097.1, CV121324.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    ATGATGTTTC CACAAGCCAG GCACTCGGCT TCGTCTCAAT CGACACAGCC GCTGAAATTC 
    ACCACGTCAG ACTCTTGTGA TCGCATCAAG GATGAGTTTC AGTTCCTGCA GGCACAATAT
    CACAGCCTGA AGTTGGAATG TGATAAACTG GCAAGTGAGA AATCAGAAAT GCAGCGTCAT
    TACATAATGT ATTATGAGAT GTCGTATGGA CTCAACATCG AAATGCACAA ACAGGCGGAG
    ATTGTGAAGA GATTGAACGG GATCTGTGCT CAGGTGTTGC CGTACCTGTC TCAAGAGCAC
    CAGCAGCAGG TTCTAGGGGC GATTGAACGA GCCAAACAGG TCACCCCTCC TGAGATGAAC
    TCCATTATCC GGCAGCAGCT TCAGGTTCAC CAGCTCTCTC AGCTCCAGGG TTTGGCTTTA
    CCCATGACCC CTCTGCCCCT TGGCTTGACC CCACCGACCC TGCCCGCCGT CACCTCCAGC
    TCGGGCCTGC TGTCGCTGTC CAGCATCCTG GCCTCCCACG CACACCTCGC CAAAGAGGAC
    AAGAGCTCCC GCGACGCTGC CGACGGCCAC CGTGACGAGG ACGCAGACAA ATCCGACTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001299614.1
    CDS297..896
    Translation

    Target ORF information:

    RefSeq Version NM_001312685.1
    Organism Danio rerio(zebrafish)
    Definition Danio rerio chico (chico), transcript variant 2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    NM_001312685.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    ATGATGTTTC CACAAGCCAG GCACTCGGCT TCGTCTCAAT CGACACAGCC GCTGAAATTC 
    ACCACGTCAG ACTCTTGTGA TCGCATCAAG GATGAGTTTC AGTTCCTGCA GGCACAATAT
    CACAGCCTGA AGTTGGAATG TGATAAACTG GCAAGTGAGA AATCAGAAAT GCAGCGTCAT
    TACATAATGT ATTATGAGAT GTCGTATGGA CTCAACATCG AAATGCACAA ACAGGCGGAG
    ATTGTGAAGA GATTGAACGG GATCTGTGCT CAGGTGTTGC CGTACCTGTC TCAAGAGCAC
    CAGCAGCAGG TTCTAGGGGC GATTGAACGA GCCAAACAGG TCACCCCTCC TGAGATGAAC
    TCCATTATCC GGCAGCAGCT TCAGGTTCAC CAGCTCTCTC AGCTCCAGGG TTTGGCTTTA
    CCCATGACCC CTCTGCCCCT TGGCTTGACC CCACCGACCC TGCCCGCCGT CACCTCCAGC
    TCGGGCCTGC TGTCGCTGTC CAGCATCCTG GCCTCCCACG CACACCTCGC CAAAGAGGAC
    AAGAGCTCCC GCGACGCTGC CGACGGCCAC CGTGACGAGG ACGCAGACAA ATCCGACTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID ODa07566
    Clone ID Related Accession (Same CDS sequence) XM_009298917.2 , XM_009298917.3
    Accession Version XM_009298917.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 597bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2016-06-23
    Organism Danio rerio(Zebrafish)
    Product chico isoform X1
    Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007113.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009298917.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    ATGATGTTTC CACAAGCCAG GCACTCGGCT TCGTCTCAAT CGACACAGCC GCTGAAATTC 
    ACCACGTCAG ACTCTTGTGA TCGCATCAAG GATGAGTTTC AGTTCCTGCA GGCACAATAT
    CACAGCCTGA AGTTGGAATG TGATAAACTG GCAAGTGAGA AATCAGAAAT GCAGCGTCAT
    TACATAATGT ATTATGAGAT GTCGTATGGA CTCAACATCG AAATGCACAA ACAGGCGGAG
    ATTGTGAAGA GATTGAACGG GATCTGTGCT CAGGTGTTGC CGTACCTGTC TCAAGAGCAC
    CAGCAGCAGG TTCTAGGGGC GATTGAACGA GCCAAACAGG TCACCCCTCC TGAGATGAAC
    TCCATTATCC GGCAGCTTCA GGTTCACCAG CTCTCTCAGC TCCAGGGTTT GGCTTTACCC
    ATGACCCCTC TGCCCCTTGG CTTGACCCCA CCGACCCTGC CCGCCGTCAC CTCCAGCTCG
    GGCCTGCTGT CGCTGTCCAG CATCCTGGCC TCCCACGCAC ACCTCGCCAA AGAGGACAAG
    AGCTCCCGCG ACGCTGCCGA CGGCCACCGT GACGAGGACG CAGACAAATC CGACTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_009297192.1
    CDS809..1405
    Translation

    Target ORF information:

    RefSeq Version XM_009298917.2
    Organism Danio rerio(Zebrafish)
    Definition Danio rerio chico (chico), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_009298917.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    ATGATGTTTC CACAAGCCAG GCACTCGGCT TCGTCTCAAT CGACACAGCC GCTGAAATTC 
    ACCACGTCAG ACTCTTGTGA TCGCATCAAG GATGAGTTTC AGTTCCTGCA GGCACAATAT
    CACAGCCTGA AGTTGGAATG TGATAAACTG GCAAGTGAGA AATCAGAAAT GCAGCGTCAT
    TACATAATGT ATTATGAGAT GTCGTATGGA CTCAACATCG AAATGCACAA ACAGGCGGAG
    ATTGTGAAGA GATTGAACGG GATCTGTGCT CAGGTGTTGC CGTACCTGTC TCAAGAGCAC
    CAGCAGCAGG TTCTAGGGGC GATTGAACGA GCCAAACAGG TCACCCCTCC TGAGATGAAC
    TCCATTATCC GGCAGCTTCA GGTTCACCAG CTCTCTCAGC TCCAGGGTTT GGCTTTACCC
    ATGACCCCTC TGCCCCTTGG CTTGACCCCA CCGACCCTGC CCGCCGTCAC CTCCAGCTCG
    GGCCTGCTGT CGCTGTCCAG CATCCTGGCC TCCCACGCAC ACCTCGCCAA AGAGGACAAG
    AGCTCCCGCG ACGCTGCCGA CGGCCACCGT GACGAGGACG CAGACAAATC CGACTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID ODa07566
    Clone ID Related Accession (Same CDS sequence) XM_009298917.2 , XM_009298917.3
    Accession Version XM_009298917.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 597bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-06-14
    Organism Danio rerio(zebrafish)
    Product chico isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007113.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_009298917.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    ATGATGTTTC CACAAGCCAG GCACTCGGCT TCGTCTCAAT CGACACAGCC GCTGAAATTC 
    ACCACGTCAG ACTCTTGTGA TCGCATCAAG GATGAGTTTC AGTTCCTGCA GGCACAATAT
    CACAGCCTGA AGTTGGAATG TGATAAACTG GCAAGTGAGA AATCAGAAAT GCAGCGTCAT
    TACATAATGT ATTATGAGAT GTCGTATGGA CTCAACATCG AAATGCACAA ACAGGCGGAG
    ATTGTGAAGA GATTGAACGG GATCTGTGCT CAGGTGTTGC CGTACCTGTC TCAAGAGCAC
    CAGCAGCAGG TTCTAGGGGC GATTGAACGA GCCAAACAGG TCACCCCTCC TGAGATGAAC
    TCCATTATCC GGCAGCTTCA GGTTCACCAG CTCTCTCAGC TCCAGGGTTT GGCTTTACCC
    ATGACCCCTC TGCCCCTTGG CTTGACCCCA CCGACCCTGC CCGCCGTCAC CTCCAGCTCG
    GGCCTGCTGT CGCTGTCCAG CATCCTGGCC TCCCACGCAC ACCTCGCCAA AGAGGACAAG
    AGCTCCCGCG ACGCTGCCGA CGGCCACCGT GACGAGGACG CAGACAAATC CGACTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_009297192.1
    CDS586..1182
    Translation

    Target ORF information:

    RefSeq Version XM_009298917.3
    Organism Danio rerio(zebrafish)
    Definition Danio rerio chico (chico), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_009298917.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    ATGATGTTTC CACAAGCCAG GCACTCGGCT TCGTCTCAAT CGACACAGCC GCTGAAATTC 
    ACCACGTCAG ACTCTTGTGA TCGCATCAAG GATGAGTTTC AGTTCCTGCA GGCACAATAT
    CACAGCCTGA AGTTGGAATG TGATAAACTG GCAAGTGAGA AATCAGAAAT GCAGCGTCAT
    TACATAATGT ATTATGAGAT GTCGTATGGA CTCAACATCG AAATGCACAA ACAGGCGGAG
    ATTGTGAAGA GATTGAACGG GATCTGTGCT CAGGTGTTGC CGTACCTGTC TCAAGAGCAC
    CAGCAGCAGG TTCTAGGGGC GATTGAACGA GCCAAACAGG TCACCCCTCC TGAGATGAAC
    TCCATTATCC GGCAGCTTCA GGTTCACCAG CTCTCTCAGC TCCAGGGTTT GGCTTTACCC
    ATGACCCCTC TGCCCCTTGG CTTGACCCCA CCGACCCTGC CCGCCGTCAC CTCCAGCTCG
    GGCCTGCTGT CGCTGTCCAG CATCCTGGCC TCCCACGCAC ACCTCGCCAA AGAGGACAAG
    AGCTCCCGCG ACGCTGCCGA CGGCCACCGT GACGAGGACG CAGACAAATC CGACTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    RFX transcription factors are essential for hearing in mice.
    Nature communications68549(2015 Oct)
    Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R


    Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.
    Briefings in bioinformatics12(5)449-62(2011 Sep)
    Gaudet P,Livstone MS,Lewis SE,Thomas PD


    Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.
    Proceedings of the National Academy of Sciences of the United States of America99(26)16899-903(2002 Dec)
    Strausberg RL,Feingold EA,Grouse LH,Derge JG,Klausner RD,Collins FS,Wagner L,Shenmen CM,Schuler GD,Altschul SF,Zeeberg B,Buetow KH,Schaefer CF,Bhat NK,Hopkins RF,Jordan H,Moore T,Max SI,Wang J,Hsieh F,Diatchenko L,Marusina K,Farmer AA,Rubin GM,Hong L,Stapleton M,Soares MB,Bonaldo MF,Casavant TL,Scheetz TE,Brownstein MJ,Usdin TB,Toshiyuki S,Carninci P,Prange C,Raha SS,Loquellano NA,Peters GJ,Abramson RD,Mullahy SJ,Bosak SA,McEwan PJ,McKernan KJ,Malek JA,Gunaratne PH,Richards S,Worley KC,Hale S,Garcia AM,Gay LJ,Hulyk SW,Villalon DK,Muzny DM,Sodergren EJ,Lu X,Gibbs RA,Fahey J,Helton E,Ketteman M,Madan A,Rodrigues S,Sanchez A,Whiting M,Madan A,Young AC,Shevchenko Y,Bouffard GG,Blakesley RW,Touchman JW,Green ED,Dickson MC,Rodriguez AC,Grimwood J,Schmutz J,Myers RM,Butterfield YS,Krzywinski MI,Skalska U,Smailus DE,Schnerch A,Schein JE,Jones SJ,Marra MA,