Gene Symbol | sec22bb |
Entrez Gene ID | 327277 |
Full Name | SEC22 homolog B, vesicle trafficking protein b |
Synonyms | sec22l1b,wu:fd20b06 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » sec22bb cDNA ORF clone
Gene Symbol | sec22bb |
Entrez Gene ID | 327277 |
Full Name | SEC22 homolog B, vesicle trafficking protein b |
Synonyms | sec22l1b,wu:fd20b06 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
NM_201302.2 | NP_958459.1 | vesicle-trafficking protein SEC22b-B isoform 2 precursor |
NM_001328526.1 | NP_001315455.1 | vesicle-trafficking protein SEC22b-B isoform 1 precursor |
Rattus norvegicus (Norway rat) | Sec22b | NP_001020857.1 |
Danio rerio (zebrafish) | sec22bb | NP_958459.1 |
Saccharomyces cerevisiae (baker's yeast) | SEC22 | NP_013370.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_04050 | XP_003719791.1 |
Neurospora crassa | NCU06708 | XP_960888.1 |
Arabidopsis thaliana (thale cress) | SEC22 | NP_172653.1 |
Oryza sativa (rice) | Os03g0791500 | NP_001051520.2 |
Xenopus tropicalis (tropical clawed frog) | sec22b | NP_989156.1 |
Canis lupus familiaris (dog) | LOC475816 | XP_533025.1 |
Danio rerio (zebrafish) | LOC100535340 | XP_003199112.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP012717 | XP_307637.2 |
Caenorhabditis elegans (roundworm) | sec-22 | NP_508198.1 |
Homo sapiens (human) | SEC22B | NP_004883.3 |
Mus musculus (house mouse) | Sec22b | NP_035472.1 |
Drosophila melanogaster (fruit fly) | Sec22 | NP_001259103.1 |
Kluyveromyces lactis | KLLA0F20251g | XP_455989.1 |
Eremothecium gossypii | AGOS_AGR267W | NP_986933.2 |
SEC22B | XP_001114286.1 | |
Bos taurus (cattle) | LOC614775 | NP_001069811.1 |
Gallus gallus (chicken) | SEC22B | NP_001026437.1 |
Schizosaccharomyces pombe (fission yeast) | sec22 | NP_596218.2 |
Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)
The BH3-only SNARE BNip1 mediates photoreceptor apoptosis in response to vesicular fusion defects.
Nishiwaki Y, Yoshizawa A, Kojima Y, Oguri E, Nakamura S, Suzuki S, Yuasa-Kawada J, Kinoshita-Kawada M, Mochizuki T, Masai I
Developmental cell25(4)374-87(2013 May)
The zebrafish retinoid-related orphan receptor (ror) gene family.
Flores MV, Hall C, Jury A, Crosier K, Crosier P
Gene expression patterns : GEP7(5)535-43(2007 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following sec22bb gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the sec22bb cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa14102 | |
Clone ID Related Accession (Same CDS sequence) | NM_001328526.1 | |
Accession Version | NM_001328526.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 660bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-01-26 | |
Organism | Danio rerio(zebrafish) | |
Product | vesicle-trafficking protein SEC22b-B isoform 1 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CT573380.7, EH489983.1, EH528230.1, EH596279.1 and EH493956.1. On Jun 17, 2016 this sequence version replaced XM_009303887.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: GFIL01018508.1, BC152220.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGTGCTGT TGACGATGAT CGCGCGGCTG GCGGACGGAC TCCCGCTTGC GGCTTCAATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001315455.1 |
CDS | 142..801 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001328526.1 |
1 | ATGGTGCTGT TGACGATGAT CGCGCGGCTG GCGGACGGAC TCCCGCTTGC GGCTTCAATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa14103 | |
Clone ID Related Accession (Same CDS sequence) | NM_201302.2 | |
Accession Version | NM_201302.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 648bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-01-26 | |
Organism | Danio rerio(zebrafish) | |
Product | vesicle-trafficking protein SEC22b-B isoform 2 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CT573380.7, EH489983.1, EH528230.1, EH596279.1 and EH493956.1. On Jun 17, 2016 this sequence version replaced NM_201302.1. ##Evidence-Data-START## Transcript exon combination :: GDQH01018547.1, GDQQ01001451.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGTGCTGT TGACGATGAT CGCGCGGCTG GCGGACGGAC TCCCGCTTGC GGCTTCAATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_958459.1 |
CDS | 142..789 |
Translation |
Target ORF information:
Target ORF information:
|
NM_201302.2 |
1 | ATGGTGCTGT TGACGATGAT CGCGCGGCTG GCGGACGGAC TCCCGCTTGC GGCTTCAATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Evolution of complexity in the zebrafish synapse proteome. |
The BH3-only SNARE BNip1 mediates photoreceptor apoptosis in response to vesicular fusion defects. |
The zebrafish retinoid-related orphan receptor (ror) gene family. |