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ORF cDNA Clones and Custom Clones » Species Summary » Danio rerio » si:busm1-104n07.3 cDNA ORF clone
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si:busm1-104n07.3 cDNA ORF clone, Danio rerio(zebrafish)

Summary

Gene Symbol si:busm1-104n07.3
Entrez Gene ID 368703
Full Name si:busm1-104n07.3
Synonyms si:dz104n07.3
General protein information
Preferred Names

si:busm1-104n07.3

Names

H-2 class II histocompatibility antigen, E-S beta chain
uncharacterized protein LOC368703
MHC class II
beta chain
Gene Type protein-coding
Organism Danio rerio(zebrafish)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_005167234.3 XP_005167291.1 H-2 class II histocompatibility antigen, E-S beta chain

Pathways from BioSystems


Homologies


Danio rerio (zebrafish) LOC100331463 XP_002667912.2
Danio rerio (zebrafish) mhc2dbb NP_001070245.1
Danio rerio (zebrafish) mhc2dcb NP_571781.1
Danio rerio (zebrafish) si:busm1-104n07.3 XP_005167291.1
Danio rerio (zebrafish) si:zfos-2070c2.3 XP_002663212.1
Danio rerio (zebrafish) mhc2dab NP_571551.2
Danio rerio (zebrafish) wu:fd58b11 XP_005168179.1
Danio rerio (zebrafish) si:dkey-33b17.3 XP_005165041.1
Danio rerio (zebrafish) si:busm1-228j01.6 NP_001001595.1
Danio rerio (zebrafish) si:busm1-194e12.12 NP_001007207.2

Gene Ontology

The following si:busm1-104n07.3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the si:busm1-104n07.3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa14439 XM_005167234.3
Latest version!		 Danio rerio si:busm1-104n07.3 (si:busm1-104n07.3), mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $174.30
$249.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID ODa14439
Clone ID Related Accession (Same CDS sequence) XM_005167234.3
Accession Version XM_005167234.3 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 753bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2017-06-14
Organism Danio rerio(zebrafish)
Product H-2 class II histocompatibility antigen, E-S beta chain
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007119.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005167234.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
ATGTCACTGC TTAGGCTTTT CTATGGTCAT CTCATATTGA CGTTGTCTGT ATTAATTGGA 
GCTGAAACAG CTAATGTATA TTACAGATAC ACTTGGATAC AATGCATCTC CAGCTCTAAA 
AATCTTAGTG ACATGGTGTT TATTGAGAGC CTTTATTTCA ATAAATATCT ATTTACACAG 
TTTAATAGTA ATATTGGAAA GTATGTGGGG TTTAGTGAGT ACGGCATTAG AAATGCAGAA 
TTTAGGAACA ATGACACCAA TTTACTGCTT AAAAAAAAAG CTGCGGTGAA CAAAGTCTGC 
AAAAATAATG CTATCAACCA TGACAAATTT ATTCGCAATA AAGCAGTGAA ACCAAAGGTT 
AAGCTCACTT TAGTGAAGCC AGCTGGTGGA AGACATCCTG CAGTTTTGAT GTGCAGCGCG 
TATGAATTTT ATCCTCCACA CATCAGAGTG TACTGGCTGA GAAATGGTGA AGTGATAACC 
TCTGATGTGA CATCAACTAT GGAGATGGCT GATGGAGACT GGTATTACCA GATTCACTCT 
GAGCTGGAGT ACAGCCCAAA ATCTGGAGAA AGGATCTCAT GTGGGATTGA ACATGCCAGC 
TCTAATAAAC CCATCATTAC AGAGTGGGAT TCATCTCGTC CTGCGTCTGA GAGGAATAAA 
ATCGCCATTG GGGCATCTGG TGTAGTTCTG GGAATCATCA TCCCAGCTAT ATGTTTTATT 
TACTACAAGA AAACTGCAGA AGCAGTTTTG TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005167291.1
CDS79..831
Translation

Target ORF information:

RefSeq Version XM_005167234.3
Organism Danio rerio(zebrafish)
Definition Danio rerio si:busm1-104n07.3 (si:busm1-104n07.3), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_005167234.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
ATGTCACTGC TTAGGCTTTT CTATGGTCAT CTCATATTGA CGTTGTCTGT ATTAATTGGA 
GCTGAAACAG CTAATGTATA TTACAGATAC ACTTGGATAC AATGCATCTC CAGCTCTAAA 
AATCTTAGTG ACATGGTGTT TATTGAGAGC CTTTATTTCA ATAAATATCT ATTTACACAG 
TTTAATAGTA ATATTGGAAA GTATGTGGGG TTTAGTGAGT ACGGCATTAG AAATGCAGAA 
TTTAGGAACA ATGACACCAA TTTACTGCTT AAAAAAAAAG CTGCGGTGAA CAAAGTCTGC 
AAAAATAATG CTATCAACCA TGACAAATTT ATTCGCAATA AAGCAGTGAA ACCAAAGGTT 
AAGCTCACTT TAGTGAAGCC AGCTGGTGGA AGACATCCTG CAGTTTTGAT GTGCAGCGCG 
TATGAATTTT ATCCTCCACA CATCAGAGTG TACTGGCTGA GAAATGGTGA AGTGATAACC 
TCTGATGTGA CATCAACTAT GGAGATGGCT GATGGAGACT GGTATTACCA GATTCACTCT 
GAGCTGGAGT ACAGCCCAAA ATCTGGAGAA AGGATCTCAT GTGGGATTGA ACATGCCAGC 
TCTAATAAAC CCATCATTAC AGAGTGGGAT TCATCTCGTC CTGCGTCTGA GAGGAATAAA 
ATCGCCATTG GGGCATCTGG TGTAGTTCTG GGAATCATCA TCCCAGCTAT ATGTTTTATT 
TACTACAAGA AAACTGCAGA AGCAGTTTTG TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed