Gene Symbol | onecut1 |
Entrez Gene ID | 393545 |
Full Name | one cut homeobox 1 |
Synonyms | oc1,onecut1l,zgc:65904,zgc:77450 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » onecut1 cDNA ORF clone
Gene Symbol | onecut1 |
Entrez Gene ID | 393545 |
Full Name | one cut homeobox 1 |
Synonyms | oc1,onecut1l,zgc:65904,zgc:77450 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_005173638.3 | XP_005173695.1 | hepatocyte nuclear factor 6 isoform X1 |
NM_200573.1 | NP_956867.1 | hepatocyte nuclear factor 6 |
XM_005173638.4 | XP_005173695.1 | hepatocyte nuclear factor 6 isoform X1 |
Homo sapiens (human) | ONECUT1 | NP_004489.1 |
Canis lupus familiaris (dog) | ONECUT1 | XP_851227.2 |
Rattus norvegicus (Norway rat) | Onecut1 | NP_073162.1 |
Danio rerio (zebrafish) | onecut1 | NP_956867.1 |
Pan troglodytes (chimpanzee) | ONECUT1 | XP_001170549.1 |
Bos taurus (cattle) | ONECUT1 | NP_001178090.1 |
Mus musculus (house mouse) | Onecut1 | NP_032288.1 |
Xenopus tropicalis (tropical clawed frog) | onecut1 | NP_001093730.1 |
MicroRNA-9 Couples Brain Neurogenesis and Angiogenesis.
Madelaine R, Sloan SA, Huber N, Notwell JH, Leung LC, Skariah G, Halluin C, Pa?ca SP, Bejerano G, Krasnow MA, Barres BA, Mourrain P
Cell reports20(7)1533-1542(2017 Aug)
Evolutionary divergence of the vertebrate TNFAIP8 gene family: Applying the spotted gar orthology bridge to understand ohnolog loss in teleosts.
Sullivan C, Lage CR, Yoder JA, Postlethwait JH, Kim CH
PloS one12(6)e0179517(2017)
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
Robustness analysis on interspecies interaction network for iron and glucose competition between Candida albicans and zebrafish during infection.
Lin C, Lin CN, Wang YC, Liu FY, Chien YW, Chuang YJ, Lan CY, Hsieh WP, Chen BS
BMC systems biology8 Suppl 5S6(2014)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
findings identify vps33b is a novel downstream target gene of the hnf6/vhnf1 pathway that regulates bile duct development in zebrafish
Title: Zebrafish vps33b, an ortholog of the gene responsible for human arthrogryposis-renal dysfunction-cholestasis syndrome, regulates biliary development downstream of the onecut transcription factor hnf6.
The following onecut1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the onecut1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa03845 | |
Clone ID Related Accession (Same CDS sequence) | NM_200573.1 | |
Accession Version | NM_200573.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1386bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-09-14 | |
Organism | Danio rerio(zebrafish) | |
Product | hepatocyte nuclear factor 6 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC056601.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC056601.1, AY835394.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168448, SAMEA3505370 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAACGCCC AGCTGTCGAT GGAGAACATT GGCGATCTGC ACGGAGTGAG CCATGAACCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_956867.1 |
CDS | 239..1624 |
Translation |
Target ORF information:
Target ORF information:
|
NM_200573.1 |
1 | ATGAACGCCC AGCTGTCGAT GGAGAACATT GGCGATCTGC ACGGAGTGAG CCATGAACCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa23477 | |
Clone ID Related Accession (Same CDS sequence) | XM_005173638.3 , XM_005173638.4 | |
Accession Version | XM_005173638.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1371bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | hepatocyte nuclear factor 6 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007129.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005173638.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAACGCCC AGCTGTCGAT GGAGAACATT GGCGATCTGC ACGGAGTGAG CCATGAACCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005173695.1 |
CDS | 502..1872 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005173638.3 |
1 | ATGAACGCCC AGCTGTCGAT GGAGAACATT GGCGATCTGC ACGGAGTGAG CCATGAACCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa23477 | |
Clone ID Related Accession (Same CDS sequence) | XM_005173638.3 , XM_005173638.4 | |
Accession Version | XM_005173638.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1371bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | hepatocyte nuclear factor 6 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007129.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005173638.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAACGCCC AGCTGTCGAT GGAGAACATT GGCGATCTGC ACGGAGTGAG CCATGAACCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005173695.1 |
CDS | 431..1801 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005173638.4 |
1 | ATGAACGCCC AGCTGTCGAT GGAGAACATT GGCGATCTGC ACGGAGTGAG CCATGAACCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
MicroRNA-9 Couples Brain Neurogenesis and Angiogenesis. |
Evolutionary divergence of the vertebrate TNFAIP8 gene family: Applying the spotted gar orthology bridge to understand ohnolog loss in teleosts. |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
Robustness analysis on interspecies interaction network for iron and glucose competition between Candida albicans and zebrafish during infection. |