Gene Symbol | zgc:64201 |
Entrez Gene ID | 393615 |
Full Name | zgc:64201 |
Synonyms | Prorsd1,prdxdd1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » zgc:64201 cDNA ORF clone
gRNAs
Gene Symbol | zgc:64201 |
Entrez Gene ID | 393615 |
Full Name | zgc:64201 |
Synonyms | Prorsd1,prdxdd1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
NM_200642.2 | NP_956936.2 | prolyl-tRNA synthetase associated domain-containing protein 1 |
NM_200642.1 | NP_956936.1 | prolyl-tRNA synthetase associated domain-containing protein 1 |
Bos taurus (cattle) | PRORSD1 | NP_001073758.1 |
Mus musculus (house mouse) | Prorsd1 | NP_080741.1 |
Rattus norvegicus (Norway rat) | Prorsd1 | NP_001099492.1 |
Gallus gallus (chicken) | PRORSD1P | NP_001182490.1 |
Pan troglodytes (chimpanzee) | LOC470377 | XP_525758.3 |
LOC718926 | XP_001112311.2 | |
Xenopus tropicalis (tropical clawed frog) | LOC100498058 | XP_002936965.1 |
Arabidopsis thaliana (thale cress) | AT1G44835 | NP_001031149.1 |
Canis lupus familiaris (dog) | LOC100856725 | XP_003639376.1 |
Danio rerio (zebrafish) | zgc:64201 | NP_956936.1 |
Oryza sativa (rice) | Os02g0767700 | NP_001048233.1 |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
Genome wide analysis reveals Zic3 interaction with distal regulatory elements of stage specific developmental genes in zebrafish.
Winata CL, Kondrychyn I, Kumar V, Srinivasan KG, Orlov Y, Ravishankar A, Prabhakar S, Stanton LW, Korzh V, Mathavan S
PLoS genetics9(10)e1003852(2013 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following zgc:64201 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the zgc:64201 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa00336 | |
Clone ID Related Accession (Same CDS sequence) | NM_200642.1 | |
Accession Version | NM_200642.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 555bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-28 | |
Organism | Danio rerio(zebrafish) | |
Product | prolyl-tRNA synthetase associated domain-containing protein 1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC057440.1. ##Evidence-Data-START## Transcript exon combination :: BC057440.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGACCAAT CAGAGCTCGT TGAGGCGGTG AGTGAAGCTG GTGGAGCCGC GGTGGCCCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_956936.1 |
CDS | 89..643 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGACCAAT CAGAGCTCGT TGAGGCGGTG AGTGAAGCTG GTGGAGCCGC GGTGGCCCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa159893 | |
Clone ID Related Accession (Same CDS sequence) | NM_200642.2 | |
Accession Version | NM_200642.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 555bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-12-22 | |
Organism | Danio rerio(zebrafish) | |
Product | prolyl-tRNA synthetase associated domain-containing protein 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from FQ323118.16. On Apr 13, 2018 this sequence version replaced NM_200642.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: CD757109.1, GFIL01047180.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGACCAAT CAGAGCTCGT TGAGGCGGTG AGTGAAGCTG GTGGAGCCGC GGTGGCGCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_956936.2 |
CDS | 125..679 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGACCAAT CAGAGCTCGT TGAGGCGGTG AGTGAAGCTG GTGGAGCCGC GGTGGCGCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
Genome wide analysis reveals Zic3 interaction with distal regulatory elements of stage specific developmental genes in zebrafish. |