Gene Symbol | sardh |
Entrez Gene ID | 394103 |
Full Name | sarcosine dehydrogenase |
Synonyms | zgc:56363 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » sardh cDNA ORF clone
Gene Symbol | sardh |
Entrez Gene ID | 394103 |
Full Name | sarcosine dehydrogenase |
Synonyms | zgc:56363 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
NM_001326686.1 | NP_001313615.1 | sarcosine dehydrogenase, mitochondrial |
XM_005155596.3 | XP_005155653.1 | sarcosine dehydrogenase, mitochondrial isoform X1 |
XM_005155597.3 | XP_005155654.1 | sarcosine dehydrogenase, mitochondrial isoform X1 |
XM_005155596.4 | XP_005155653.1 | sarcosine dehydrogenase, mitochondrial isoform X1 |
Canis lupus familiaris (dog) | SARDH | XP_548398.2 |
Danio rerio (zebrafish) | sardh | NP_957422.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_12421 | XP_003715612.1 |
Mus musculus (house mouse) | Sardh | NP_619606.1 |
Xenopus tropicalis (tropical clawed frog) | sardh | XP_002942323.2 |
Gallus gallus (chicken) | SARDH | XP_004946012.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP007123 | XP_308638.4 |
SARDH | XP_002799978.1 | |
Bos taurus (cattle) | SARDH | NP_001179970.1 |
Drosophila melanogaster (fruit fly) | CG6385 | NP_611263.1 |
Homo sapiens (human) | SARDH | NP_001128179.1 |
Pan troglodytes (chimpanzee) | SARDH | XP_003312436.1 |
Rattus norvegicus (Norway rat) | Sardh | NP_446116.1 |
COMICS: Cartoon Visualization of Omics Data in Spatial Context Using Anatomical Ontologies.
Travin D, Popov I, Guler AT, Medvedev D, van der Plas-Duivesteijn S, Varela M, Kolder ICRM, Meijer AH, Spaink HP, Palmblad M
Journal of proteome research17(1)739-744(2018 Jan)
Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)
Partial depletion of yolk during zebrafish embryogenesis changes the dynamics of methionine cycle and metabolic genes.
Huang Y, Linsen SE
BMC genomics16427(2015 Jun)
Proteomics of early zebrafish embryos.
Link V, Shevchenko A, Heisenberg CP
BMC developmental biology61(2006 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following sardh gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the sardh cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa15852 | |
Clone ID Related Accession (Same CDS sequence) | NM_001326686.1 , XM_005155596.3 , XM_005155597.3 , XM_005155596.4 | |
Accession Version | NM_001326686.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2775bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-01-26 | |
Organism | Danio rerio(zebrafish) | |
Product | sarcosine dehydrogenase, mitochondrial | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BX323065.6, BX537125.10 and AL935290.10. On May 24, 2016 this sequence version replaced XM_009305162.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMEA708828, SAMN02418766 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology inferred exon combination :: based on alignments, homology ##RefSeq-Attributes-END## |
1 | ATGGCCTTCT TAGGAACAGC AGCATGGAGG GCGATGGTGT GTCGGCAGCC CCTCTCGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001313615.1 |
CDS | 338..3112 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001326686.1 |
1 | ATGGCCTTCT TAGGAACAGC AGCATGGAGG GCGATGGTGT GTCGGCAGCC CCTCTCGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa15852 | |
Clone ID Related Accession (Same CDS sequence) | NM_001326686.1 , XM_005155596.3 , XM_005155597.3 , XM_005155596.4 | |
Accession Version | XM_005155596.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2775bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | sarcosine dehydrogenase, mitochondrial isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007121.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005155596.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCTTCT TAGGAACAGC AGCATGGAGG GCGATGGTGT GTCGGCAGCC CCTCTCGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005155653.1 |
CDS | 162..2936 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005155596.3 |
1 | ATGGCCTTCT TAGGAACAGC AGCATGGAGG GCGATGGTGT GTCGGCAGCC CCTCTCGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa15852 | |
Clone ID Related Accession (Same CDS sequence) | NM_001326686.1 , XM_005155596.3 , XM_005155597.3 , XM_005155596.4 | |
Accession Version | XM_005155597.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2775bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | sarcosine dehydrogenase, mitochondrial isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007121.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005155597.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCTTCT TAGGAACAGC AGCATGGAGG GCGATGGTGT GTCGGCAGCC CCTCTCGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005155654.1 |
CDS | 361..3135 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005155597.3 |
1 | ATGGCCTTCT TAGGAACAGC AGCATGGAGG GCGATGGTGT GTCGGCAGCC CCTCTCGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa15852 | |
Clone ID Related Accession (Same CDS sequence) | NM_001326686.1 , XM_005155596.3 , XM_005155597.3 , XM_005155596.4 | |
Accession Version | XM_005155596.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2775bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | sarcosine dehydrogenase, mitochondrial isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007121.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005155596.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCTTCT TAGGAACAGC AGCATGGAGG GCGATGGTGT GTCGGCAGCC CCTCTCGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005155653.1 |
CDS | 155..2929 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005155596.4 |
1 | ATGGCCTTCT TAGGAACAGC AGCATGGAGG GCGATGGTGT GTCGGCAGCC CCTCTCGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
COMICS: Cartoon Visualization of Omics Data in Spatial Context Using Anatomical Ontologies. |
Evolution of complexity in the zebrafish synapse proteome. |
Partial depletion of yolk during zebrafish embryogenesis changes the dynamics of methionine cycle and metabolic genes. |
Proteomics of early zebrafish embryos. |