Gene Symbol | HMBSA |
Entrez Gene ID | 394129 |
Full Name | hydroxymethylbilane synthase a |
Synonyms | hmbs,zgc:64128 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(Zebrafish) |
ORF » Species Summary » Danio rerio » HMBSA cDNA ORF clone
Gene Symbol | HMBSA |
Entrez Gene ID | 394129 |
Full Name | hydroxymethylbilane synthase a |
Synonyms | hmbs,zgc:64128 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(Zebrafish) |
mRNA | Protein | Name |
---|---|---|
NM_201154.1 | NP_957448.1 | porphobilinogen deaminase |
XM_005171816.4 | XP_005171873.1 | porphobilinogen deaminase isoform X1 |
XM_005171816.3 | XP_005171873.1 | porphobilinogen deaminase isoform X1 |
Mus musculus (house mouse) | Hmbs | NP_038579.2 |
Gallus gallus (chicken) | HMBS | XP_417846.2 |
Saccharomyces cerevisiae (baker's yeast) | HEM3 | NP_010076.1 |
Schizosaccharomyces pombe (fission yeast) | hem3 | NP_001018179.1 |
Arabidopsis thaliana (thale cress) | HEMC | NP_196445.1 |
Canis lupus familiaris (dog) | HMBS | XP_546491.2 |
Oryza sativa (rice) | Os02g0168800 | NP_001046017.1 |
HMBS | XP_001101764.1 | |
Bos taurus (cattle) | HMBS | NP_001039672.1 |
Rattus norvegicus (Norway rat) | Hmbs | NP_037300.2 |
Danio rerio (zebrafish) | hmbsa | NP_957448.1 |
Drosophila melanogaster (fruit fly) | l(3)02640 | NP_612103.1 |
Neurospora crassa | NCU10292 | XP_001728039.1 |
Homo sapiens (human) | HMBS | NP_000181.2 |
Danio rerio (zebrafish) | hmbsb | NP_001019559.1 |
Kluyveromyces lactis | KLLA0C15147g | XP_452879.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_04860 | XP_003712340.1 |
Xenopus tropicalis (tropical clawed frog) | hmbs | NP_001005635.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP011080 | XP_564464.3 |
Eremothecium gossypii | AGOS_ABL107C | NP_982840.1 |
Parental exposure to gamma radiation causes progressively altered transcriptomes linked to adverse effects in zebrafish offspring.
Hurem S, Mart?n LM, Lindeman L, Brede DA, Salbu B, Lyche JL, Alestr?m P, Kamstra JH
Environmental pollution (Barking, Essex : 1987)234855-863(2017 Dec)
Altered Adipogenesis in Zebrafish Larvae Following High Fat Diet and Chemical Exposure Is Visualised by Stimulated Raman Scattering Microscopy.
den Broeder MJ, Moester MJB, Kamstra JH, Cenijn PH, Davidoiu V, Kamminga LM, Ariese F, de Boer JF, Legler J
International journal of molecular sciences18(4)(2017 Apr)
Dose-dependent effects of gamma radiation on the early zebrafish development and gene expression.
Hurem S, Mart?n LM, Brede DA, Skjerve E, Nourizadeh-Lillabadi R, Lind OC, Christensen T, Berg V, Teien HC, Salbu B, Oughton DH, Alestr?m P, Lyche JL
PloS one12(6)e0179259(2017)
Differential DNA methylation at conserved non-genic elements and evidence for transgenerational inheritance following developmental exposure to mono(2-ethylhexyl) phthalate and 5-azacytidine in zebrafish.
Kamstra JH, Sales LB, Alestr?m P, Legler J
Epigenetics & chromatin1020(2017)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following HMBSA gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the HMBSA cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa34681 | |
Clone ID Related Accession (Same CDS sequence) | NM_201154.1 | |
Accession Version | NM_201154.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1077bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-09 | |
Organism | Danio rerio(zebrafish) | |
Product | porphobilinogen deaminase | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC053268.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC053268.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505386, SAMEA3505389 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGAAGGGC CATTCAAGTA TATTAGAGAG GGAAATGGCA AAGCCAGTCG GGTTATTCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_957448.1 |
CDS | 45..1121 |
Translation |
Target ORF information:
Target ORF information:
|
NM_201154.1 |
1 | ATGGAAGGGC CATTCAAGTA TATTAGAGAG GGAAATGGCA AAGCCAGTCG GGTTATTCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa10443 | |
Clone ID Related Accession (Same CDS sequence) | XM_005171816.4 , XM_005171816.3 | |
Accession Version | XM_005171816.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1086bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | porphobilinogen deaminase isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007116.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005171816.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGGAGA TGTCTGGGAA CGATACTATC TCTCAAGAGG GAAATGGCAA AGCCAGTCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005171873.1 |
CDS | 176..1261 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005171816.4 |
1 | ATGATGGAGA TGTCTGGGAA CGATACTATC TCTCAAGAGG GAAATGGCAA AGCCAGTCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa10443 | |
Clone ID Related Accession (Same CDS sequence) | XM_005171816.4 , XM_005171816.3 | |
Accession Version | XM_005171816.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1086bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | porphobilinogen deaminase isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007116.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005171816.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGGAGA TGTCTGGGAA CGATACTATC TCTCAAGAGG GAAATGGCAA AGCCAGTCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005171873.1 |
CDS | 176..1261 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005171816.3 |
1 | ATGATGGAGA TGTCTGGGAA CGATACTATC TCTCAAGAGG GAAATGGCAA AGCCAGTCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Parental exposure to gamma radiation causes progressively altered transcriptomes linked to adverse effects in zebrafish offspring. |
Altered Adipogenesis in Zebrafish Larvae Following High Fat Diet and Chemical Exposure Is Visualised by Stimulated Raman Scattering Microscopy. |
Dose-dependent effects of gamma radiation on the early zebrafish development and gene expression. |
Differential DNA methylation at conserved non-genic elements and evidence for transgenerational inheritance following developmental exposure to mono(2-ethylhexyl) phthalate and 5-azacytidine in zebrafish. |