Gene Symbol |
PLEKHA3 |
Entrez Gene ID |
394182 |
Full Name |
pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3 |
Synonyms |
zgc:63749 |
General protein information |
- Preferred Names
pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3
Names
pleckstrin homology domain-containing family A member 3
|
Gene Type |
protein-coding |
Organism |
Danio rerio(Zebrafish) |
mRNA and Protein(s)
mRNA |
Protein |
Name |
NM_201207.1 |
NP_957501.1 |
pleckstrin homology domain-containing family A member 3 |
XM_009306079.2 |
XP_009304354.1 |
pleckstrin homology domain-containing family A member 3 isoform X1 |
Canis lupus familiaris (dog) |
PLEKHA3 |
XP_545547.4 |
Xenopus tropicalis (tropical clawed frog) |
plekha3 |
NP_001120200.1 |
Pan troglodytes (chimpanzee) |
PLEKHA3 |
XP_515943.2 |
|
PLEKHA3 |
XP_001099197.1 |
Bos taurus (cattle) |
PLEKHA3 |
NP_001095383.1 |
Mus musculus (house mouse) |
Plekha3 |
NP_112546.1 |
Gallus gallus (chicken) |
PLEKHA3 |
NP_001026422.1 |
Rattus norvegicus (Norway rat) |
Plekha3 |
NP_001013095.1 |
Danio rerio (zebrafish) |
plekha3 |
NP_957501.1 |
Homo sapiens (human) |
PLEKHA3 |
NP_061964.3 |
Related articles in PubMed
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following PLEKHA3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PLEKHA3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
ODa30679 |
Clone ID Related Accession (Same CDS sequence) |
NM_201207.1
|
Accession Version |
NM_201207.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 897bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-11-23 |
Organism |
Danio rerio(zebrafish) |
Product |
pleckstrin homology domain-containing family A member 3 |
Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC055231.1.
##Evidence-Data-START##
Transcript exon combination :: BC055231.1 [ECO:0000332]
RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350]
##Evidence-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841
| ATGGAAGGAG TCCTTTATAA ATGGACAAAC TATATGACAG GATGGCAGCC AAGGTGGTTT GTGCTGGACA ATGGCATTAT TTCCTATTAT GATTCACAAG ATGACGTGTG CAAAGGAAGC AAAGGCAGTA TTAAGATGCC AGTGTGTGAA ATTAAAGTTC ACCCGACTGA CAACACGCGT CTGGAGCTCA TCATACCAGG AGAGCAGCAT TTTTATGTGA AGGCTGTAAA TGCAGCCGAG AGGCAGAAGT GGCTGGTGGC TCTGGGAAGC TCCAAAGCCG GACTCATTGA CACTCGAACC AAAAAAGAAA GGGAGTTAAC AGAAACCACA GAATCACTGA AAACCAAGAT GTCGGAGCTG CGTCTGTATT GTGACTTACT AATGCAGCAA GTACACACTA TTCAGGAGTC AGTCGAACAG CACGAAGAGC CGGCGGTGGC CAACACTGAG ACAAGGAACG AGGCGTCCTC ATTACTAAGT GCCACCTGCG AAACCTTCAT CAAAACACTG GAAGAATGTA TGAAGATCGC CAACTCTAAG TTCAAGACTG ACATGTTGCA GTCCAGTCCA TCTGATTCCA TAATGTCTCC TGTGTCCCCA TCTCCTGTCC AGATGTCTCG GATGAAGCGT TCGATCAGCC ATCCCGGCAC CTACAATTAC GAAAGGTCGA GTTTGCCAAA AGACTGTGTG GCGTTCCAGA AATCCAGTCA GAGGAGGACG AGGACATGCT CCGATACTGA AGCTCACAGC GACAGAGGAC CTGACGACAT AGAGCGCTTG ATGTTTCACA GAGCAAACAT CAACGGTGAC TCCACTCCGA GTATCCCAGA AGAGGTTGGA ACAAGCACAA AGTTCCTGTC GGAAACTGAC ACTCCGGAAT CTGACCTTTC CCTCTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_957501.1 |
CDS | 260..1156 |
Translation | |
Target ORF information:
RefSeq Version | NM_201207.1 |
Organism | Danio rerio(zebrafish) |
Definition | Danio rerio pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3 (plekha3), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_201207.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841
| ATGGAAGGAG TCCTTTATAA ATGGACAAAC TATATGACAG GATGGCAGCC AAGGTGGTTT GTGCTGGACA ATGGCATTAT TTCCTATTAT GATTCACAAG ATGACGTGTG CAAAGGAAGC AAAGGCAGTA TTAAGATGCC AGTGTGTGAA ATTAAAGTTC ACCCGACTGA CAACACGCGT CTGGAGCTCA TCATACCAGG AGAGCAGCAT TTTTATGTGA AGGCTGTAAA TGCAGCCGAG AGGCAGAAGT GGCTGGTGGC TCTGGGAAGC TCCAAAGCCG GACTCATTGA CACTCGAACC AAAAAAGAAA GGGAGTTAAC AGAAACCACA GAATCACTGA AAACCAAGAT GTCGGAGCTG CGTCTGTATT GTGACTTACT AATGCAGCAA GTACACACTA TTCAGGAGTC AGTCGAACAG CACGAAGAGC CGGCGGTGGC CAACACTGAG ACAAGGAACG AGGCGTCCTC ATTACTAAGT GCCACCTGCG AAACCTTCAT CAAAACACTG GAAGAATGTA TGAAGATCGC CAACTCTAAG TTCAAGACTG ACATGTTGCA GTCCAGTCCA TCTGATTCCA TAATGTCTCC TGTGTCCCCA TCTCCTGTCC AGATGTCTCG GATGAAGCGT TCGATCAGCC ATCCCGGCAC CTACAATTAC GAAAGGTCGA GTTTGCCAAA AGACTGTGTG GCGTTCCAGA AATCCAGTCA GAGGAGGACG AGGACATGCT CCGATACTGA AGCTCACAGC GACAGAGGAC CTGACGACAT AGAGCGCTTG ATGTTTCACA GAGCAAACAT CAACGGTGAC TCCACTCCGA GTATCCCAGA AGAGGTTGGA ACAAGCACAA AGTTCCTGTC GGAAACTGAC ACTCCGGAAT CTGACCTTTC CCTCTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
ODa40656 |
Clone ID Related Accession (Same CDS sequence) |
XM_009306079.2
|
Accession Version |
XM_009306079.2 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 879bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-06-23 |
Organism |
Danio rerio(Zebrafish) |
Product |
pleckstrin homology domain-containing family A member 3 isoform X1 |
Comment |
MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007122.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jun 24, 2016 this sequence version replaced XM_009306079.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Danio rerio Annotation Release 105
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841
| ATGCCCATCC AGCCGCAACC CAGATGGCAG CCAAGGTGGT TTGTGCTGGA CAATGGCATT ATTTCCTATT ATGATTCACA AGATGACGTG TGCAAAGGAA GCAAAGGCAG TATTAAGATG TCAGTGTGTG AAATTAAAGT TCACCCGACT GACAACACGC GTCTGGAGCT CATCATACCA GGAGAGCAGC ATTTTTATGT GAAGGCTGTA AATGCAGCCG AGAGGCAGAA GTGGCTGGTG GCTCTGGGAA GCTCCAAAGC CGGACTCATT GACACTCGAA CCAAAAAAGA AAGGGAGTTA ACAGAAACCA CAGAATCACT GAAAACCAAG ATGTCGGAGC TGCGTCTGTA CTGTGACTTA CTAATGCAGC AAGTACACAC TATTCAGGAG TCAGTCGAAC AGCACGAAGA GCCGGCGGTG GCCAACACTG AGACAAGGAA CGAGGCGTCC TCATTACTAA GTGCCACCTG TGAAACCTTC ATCAAAACAC TGGAAGAATG TATGAAGATC GCCAACTCTA AGTTCAAGAC TGACATGTTG CAGTCCAGTC CATCTGATTC CATAATGTCT CCTGTGTCCC CATCTCCTGT CCAGATGTCT CGGATGAAGC GTTCGATCAG CCATCCTGGC ACCTACAATT ATGAAAGGTC GAGTTTGCCA AAAGACTGTG TGGCGTTCCA GAAATCCAGT CAGAGGAGGA CGAGGACATG CTCCGATACT GAAGCTCACA GCGACAGAGG ACCTGACGAC ATAGAGCGCT TGATGTTTCA CAGAGCAAAC ATCAACGGTG ACTCCACTCC GAGTATCCCA GAAGAGGTTG GAACAAGCAC AAAGTTCCTG TCGGAAACTG ACACTCCGGA ATCTGACCTT TCCCTCTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_009304354.1 |
CDS | 12..890 |
Translation | |
Target ORF information:
RefSeq Version | XM_009306079.2 |
Organism | Danio rerio(Zebrafish) |
Definition | Danio rerio pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3 (plekha3), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_009306079.2 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841
| ATGCCCATCC AGCCGCAACC CAGATGGCAG CCAAGGTGGT TTGTGCTGGA CAATGGCATT ATTTCCTATT ATGATTCACA AGATGACGTG TGCAAAGGAA GCAAAGGCAG TATTAAGATG TCAGTGTGTG AAATTAAAGT TCACCCGACT GACAACACGC GTCTGGAGCT CATCATACCA GGAGAGCAGC ATTTTTATGT GAAGGCTGTA AATGCAGCCG AGAGGCAGAA GTGGCTGGTG GCTCTGGGAA GCTCCAAAGC CGGACTCATT GACACTCGAA CCAAAAAAGA AAGGGAGTTA ACAGAAACCA CAGAATCACT GAAAACCAAG ATGTCGGAGC TGCGTCTGTA CTGTGACTTA CTAATGCAGC AAGTACACAC TATTCAGGAG TCAGTCGAAC AGCACGAAGA GCCGGCGGTG GCCAACACTG AGACAAGGAA CGAGGCGTCC TCATTACTAA GTGCCACCTG TGAAACCTTC ATCAAAACAC TGGAAGAATG TATGAAGATC GCCAACTCTA AGTTCAAGAC TGACATGTTG CAGTCCAGTC CATCTGATTC CATAATGTCT CCTGTGTCCC CATCTCCTGT CCAGATGTCT CGGATGAAGC GTTCGATCAG CCATCCTGGC ACCTACAATT ATGAAAGGTC GAGTTTGCCA AAAGACTGTG TGGCGTTCCA GAAATCCAGT CAGAGGAGGA CGAGGACATG CTCCGATACT GAAGCTCACA GCGACAGAGG ACCTGACGAC ATAGAGCGCT TGATGTTTCA CAGAGCAAAC ATCAACGGTG ACTCCACTCC GAGTATCCCA GAAGAGGTTG GAACAAGCAC AAAGTTCCTG TCGGAAACTG ACACTCCGGA ATCTGACCTT TCCCTCTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J |
 |
RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R |