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PLEKHA3 cDNA ORF clone, Danio rerio(Zebrafish)

Summary

Gene Symbol PLEKHA3
Entrez Gene ID 394182
Full Name pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3
Synonyms zgc:63749
General protein information
Preferred Names

pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3

Names

pleckstrin homology domain-containing family A member 3
Gene Type protein-coding
Organism Danio rerio(Zebrafish)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_201207.1 NP_957501.1 pleckstrin homology domain-containing family A member 3
XM_009306079.2 XP_009304354.1 pleckstrin homology domain-containing family A member 3 isoform X1

Pathways from BioSystems


Homologies


Canis lupus familiaris (dog) PLEKHA3 XP_545547.4
Xenopus tropicalis (tropical clawed frog) plekha3 NP_001120200.1
Pan troglodytes (chimpanzee) PLEKHA3 XP_515943.2
PLEKHA3 XP_001099197.1
Bos taurus (cattle) PLEKHA3 NP_001095383.1
Mus musculus (house mouse) Plekha3 NP_112546.1
Gallus gallus (chicken) PLEKHA3 NP_001026422.1
Rattus norvegicus (Norway rat) Plekha3 NP_001013095.1
Danio rerio (zebrafish) plekha3 NP_957501.1
Homo sapiens (human) PLEKHA3 NP_061964.3

Gene Ontology


Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following PLEKHA3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PLEKHA3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa30679 NM_201207.1
Latest version!		 Danio rerio pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3 (plekha3), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $174.30
$249.00
ODa40656 XM_009306079.2
Latest version!		 Danio rerio pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3 (plekha3), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $174.30
$249.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID ODa30679
Clone ID Related Accession (Same CDS sequence) NM_201207.1
Accession Version NM_201207.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 897bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-11-23
Organism Danio rerio(zebrafish)
Product pleckstrin homology domain-containing family A member 3
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC055231.1. ##Evidence-Data-START## Transcript exon combination :: BC055231.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
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841
ATGGAAGGAG TCCTTTATAA ATGGACAAAC TATATGACAG GATGGCAGCC AAGGTGGTTT 
GTGCTGGACA ATGGCATTAT TTCCTATTAT GATTCACAAG ATGACGTGTG CAAAGGAAGC 
AAAGGCAGTA TTAAGATGCC AGTGTGTGAA ATTAAAGTTC ACCCGACTGA CAACACGCGT 
CTGGAGCTCA TCATACCAGG AGAGCAGCAT TTTTATGTGA AGGCTGTAAA TGCAGCCGAG 
AGGCAGAAGT GGCTGGTGGC TCTGGGAAGC TCCAAAGCCG GACTCATTGA CACTCGAACC 
AAAAAAGAAA GGGAGTTAAC AGAAACCACA GAATCACTGA AAACCAAGAT GTCGGAGCTG 
CGTCTGTATT GTGACTTACT AATGCAGCAA GTACACACTA TTCAGGAGTC AGTCGAACAG 
CACGAAGAGC CGGCGGTGGC CAACACTGAG ACAAGGAACG AGGCGTCCTC ATTACTAAGT 
GCCACCTGCG AAACCTTCAT CAAAACACTG GAAGAATGTA TGAAGATCGC CAACTCTAAG 
TTCAAGACTG ACATGTTGCA GTCCAGTCCA TCTGATTCCA TAATGTCTCC TGTGTCCCCA 
TCTCCTGTCC AGATGTCTCG GATGAAGCGT TCGATCAGCC ATCCCGGCAC CTACAATTAC 
GAAAGGTCGA GTTTGCCAAA AGACTGTGTG GCGTTCCAGA AATCCAGTCA GAGGAGGACG 
AGGACATGCT CCGATACTGA AGCTCACAGC GACAGAGGAC CTGACGACAT AGAGCGCTTG 
ATGTTTCACA GAGCAAACAT CAACGGTGAC TCCACTCCGA GTATCCCAGA AGAGGTTGGA 
ACAAGCACAA AGTTCCTGTC GGAAACTGAC ACTCCGGAAT CTGACCTTTC CCTCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_957501.1
CDS260..1156
Translation

Target ORF information:

RefSeq Version NM_201207.1
Organism Danio rerio(zebrafish)
Definition Danio rerio pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3 (plekha3), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_201207.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
ATGGAAGGAG TCCTTTATAA ATGGACAAAC TATATGACAG GATGGCAGCC AAGGTGGTTT 
GTGCTGGACA ATGGCATTAT TTCCTATTAT GATTCACAAG ATGACGTGTG CAAAGGAAGC 
AAAGGCAGTA TTAAGATGCC AGTGTGTGAA ATTAAAGTTC ACCCGACTGA CAACACGCGT 
CTGGAGCTCA TCATACCAGG AGAGCAGCAT TTTTATGTGA AGGCTGTAAA TGCAGCCGAG 
AGGCAGAAGT GGCTGGTGGC TCTGGGAAGC TCCAAAGCCG GACTCATTGA CACTCGAACC 
AAAAAAGAAA GGGAGTTAAC AGAAACCACA GAATCACTGA AAACCAAGAT GTCGGAGCTG 
CGTCTGTATT GTGACTTACT AATGCAGCAA GTACACACTA TTCAGGAGTC AGTCGAACAG 
CACGAAGAGC CGGCGGTGGC CAACACTGAG ACAAGGAACG AGGCGTCCTC ATTACTAAGT 
GCCACCTGCG AAACCTTCAT CAAAACACTG GAAGAATGTA TGAAGATCGC CAACTCTAAG 
TTCAAGACTG ACATGTTGCA GTCCAGTCCA TCTGATTCCA TAATGTCTCC TGTGTCCCCA 
TCTCCTGTCC AGATGTCTCG GATGAAGCGT TCGATCAGCC ATCCCGGCAC CTACAATTAC 
GAAAGGTCGA GTTTGCCAAA AGACTGTGTG GCGTTCCAGA AATCCAGTCA GAGGAGGACG 
AGGACATGCT CCGATACTGA AGCTCACAGC GACAGAGGAC CTGACGACAT AGAGCGCTTG 
ATGTTTCACA GAGCAAACAT CAACGGTGAC TCCACTCCGA GTATCCCAGA AGAGGTTGGA 
ACAAGCACAA AGTTCCTGTC GGAAACTGAC ACTCCGGAAT CTGACCTTTC CCTCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ODa40656
Clone ID Related Accession (Same CDS sequence) XM_009306079.2
Accession Version XM_009306079.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 879bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-06-23
Organism Danio rerio(Zebrafish)
Product pleckstrin homology domain-containing family A member 3 isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007122.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009306079.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
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241
301
361
421
481
541
601
661
721
781
841
ATGCCCATCC AGCCGCAACC CAGATGGCAG CCAAGGTGGT TTGTGCTGGA CAATGGCATT 
ATTTCCTATT ATGATTCACA AGATGACGTG TGCAAAGGAA GCAAAGGCAG TATTAAGATG 
TCAGTGTGTG AAATTAAAGT TCACCCGACT GACAACACGC GTCTGGAGCT CATCATACCA 
GGAGAGCAGC ATTTTTATGT GAAGGCTGTA AATGCAGCCG AGAGGCAGAA GTGGCTGGTG 
GCTCTGGGAA GCTCCAAAGC CGGACTCATT GACACTCGAA CCAAAAAAGA AAGGGAGTTA 
ACAGAAACCA CAGAATCACT GAAAACCAAG ATGTCGGAGC TGCGTCTGTA CTGTGACTTA 
CTAATGCAGC AAGTACACAC TATTCAGGAG TCAGTCGAAC AGCACGAAGA GCCGGCGGTG 
GCCAACACTG AGACAAGGAA CGAGGCGTCC TCATTACTAA GTGCCACCTG TGAAACCTTC 
ATCAAAACAC TGGAAGAATG TATGAAGATC GCCAACTCTA AGTTCAAGAC TGACATGTTG 
CAGTCCAGTC CATCTGATTC CATAATGTCT CCTGTGTCCC CATCTCCTGT CCAGATGTCT 
CGGATGAAGC GTTCGATCAG CCATCCTGGC ACCTACAATT ATGAAAGGTC GAGTTTGCCA 
AAAGACTGTG TGGCGTTCCA GAAATCCAGT CAGAGGAGGA CGAGGACATG CTCCGATACT 
GAAGCTCACA GCGACAGAGG ACCTGACGAC ATAGAGCGCT TGATGTTTCA CAGAGCAAAC 
ATCAACGGTG ACTCCACTCC GAGTATCCCA GAAGAGGTTG GAACAAGCAC AAAGTTCCTG 
TCGGAAACTG ACACTCCGGA ATCTGACCTT TCCCTCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_009304354.1
CDS12..890
Translation

Target ORF information:

RefSeq Version XM_009306079.2
Organism Danio rerio(Zebrafish)
Definition Danio rerio pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3 (plekha3), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_009306079.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
ATGCCCATCC AGCCGCAACC CAGATGGCAG CCAAGGTGGT TTGTGCTGGA CAATGGCATT 
ATTTCCTATT ATGATTCACA AGATGACGTG TGCAAAGGAA GCAAAGGCAG TATTAAGATG 
TCAGTGTGTG AAATTAAAGT TCACCCGACT GACAACACGC GTCTGGAGCT CATCATACCA 
GGAGAGCAGC ATTTTTATGT GAAGGCTGTA AATGCAGCCG AGAGGCAGAA GTGGCTGGTG 
GCTCTGGGAA GCTCCAAAGC CGGACTCATT GACACTCGAA CCAAAAAAGA AAGGGAGTTA 
ACAGAAACCA CAGAATCACT GAAAACCAAG ATGTCGGAGC TGCGTCTGTA CTGTGACTTA 
CTAATGCAGC AAGTACACAC TATTCAGGAG TCAGTCGAAC AGCACGAAGA GCCGGCGGTG 
GCCAACACTG AGACAAGGAA CGAGGCGTCC TCATTACTAA GTGCCACCTG TGAAACCTTC 
ATCAAAACAC TGGAAGAATG TATGAAGATC GCCAACTCTA AGTTCAAGAC TGACATGTTG 
CAGTCCAGTC CATCTGATTC CATAATGTCT CCTGTGTCCC CATCTCCTGT CCAGATGTCT 
CGGATGAAGC GTTCGATCAG CCATCCTGGC ACCTACAATT ATGAAAGGTC GAGTTTGCCA 
AAAGACTGTG TGGCGTTCCA GAAATCCAGT CAGAGGAGGA CGAGGACATG CTCCGATACT 
GAAGCTCACA GCGACAGAGG ACCTGACGAC ATAGAGCGCT TGATGTTTCA CAGAGCAAAC 
ATCAACGGTG ACTCCACTCC GAGTATCCCA GAAGAGGTTG GAACAAGCAC AAAGTTCCTG 
TCGGAAACTG ACACTCCGGA ATCTGACCTT TCCCTCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J


book

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R