Gene Symbol | sfpq |
Entrez Gene ID | 406564 |
Full Name | splicing factor proline/glutamine-rich |
Synonyms | hm:zeh0027,wu:fa11h12,wu:fd10f03,zgc:85935 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » sfpq cDNA ORF clone
Gene Symbol | sfpq |
Entrez Gene ID | 406564 |
Full Name | splicing factor proline/glutamine-rich |
Synonyms | hm:zeh0027,wu:fa11h12,wu:fd10f03,zgc:85935 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
NM_213278.1 | NP_998443.1 | splicing factor, proline- and glutamine-rich |
Homo sapiens (human) | SFPQ | NP_005057.1 |
Pan troglodytes (chimpanzee) | SFPQ | NP_001238776.1 |
Mus musculus (house mouse) | Sfpq | NP_076092.1 |
Bos taurus (cattle) | SFPQ | NP_001193220.1 |
Gallus gallus (chicken) | SFPQ | XP_417784.3 |
Danio rerio (zebrafish) | sfpq | NP_998443.1 |
Rattus norvegicus (Norway rat) | Sfpq | NP_001020442.1 |
Canis lupus familiaris (dog) | SFPQ | XP_005629463.1 |
Dynamic RNA-protein interactions underlie the zebrafish maternal-to-zygotic transition.
Despic V, Dejung M, Gu M, Krishnan J, Zhang J, Herzel L, Straube K, Gerstein MB, Butter F, Neugebauer KM
Genome research27(7)1184-1194(2017 Jul)
Non-nuclear Pool of Splicing Factor SFPQ Regulates Axonal Transcripts Required for Normal Motor Development.
Thomas-Jinu S, Gordon PM, Fielding T, Taylor R, Smith BN, Snowden V, Blanc E, Vance C, Topp S, Wong CH, Bielen H, Williams KL, McCann EP, Nicholson GA, Pan-Vazquez A, Fox AH, Bond CS, Talbot WS, Blair IP, Shaw CE, Houart C
Neuron94(2)322-336.e5(2017 Apr)
Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
Jak/Stat signaling stimulates zebrafish optic nerve regeneration and overcomes the inhibitory actions of Socs3 and Sfpq.
Elsaeidi F, Bemben MA, Zhao XF, Goldman D
The Journal of neuroscience : the official journal of the Society for Neuroscience34(7)2632-44(2014 Feb)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
we report the surprising finding that zebrafish respond to optic nerve lesion by inducing the expression of Sfpq and Socs3a
Title: Jak/Stat signaling stimulates zebrafish optic nerve regeneration and overcomes the inhibitory actions of Socs3 and Sfpq.
sfpq function is required for differentiation, but not for determination, of specific classes of brain neurons.
Title: Whitesnake/sfpq is required for cell survival and neuronal development in the zebrafish.
The following sfpq gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the sfpq cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa02962 | |
Clone ID Related Accession (Same CDS sequence) | NM_213278.1 | |
Accession Version | NM_213278.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1860bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-30 | |
Organism | Danio rerio(zebrafish) | |
Product | splicing factor, proline- and glutamine-rich | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC068428.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC068428.1, AY648751.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGGGATGC GCGGTGGCAT GGGCATGGGG ATGGGTATGG GCATGGGAAT GGGAATGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_998443.1 |
CDS | 175..2034 |
Translation |
Target ORF information:
Target ORF information:
|
NM_213278.1 |
1 | ATGGGGATGC GCGGTGGCAT GGGCATGGGG ATGGGTATGG GCATGGGAAT GGGAATGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Dynamic RNA-protein interactions underlie the zebrafish maternal-to-zygotic transition. |
Non-nuclear Pool of Splicing Factor SFPQ Regulates Axonal Transcripts Required for Normal Motor Development. |
Evolution of complexity in the zebrafish synapse proteome. |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
Jak/Stat signaling stimulates zebrafish optic nerve regeneration and overcomes the inhibitory actions of Socs3 and Sfpq. |