Gene Symbol | snx5 |
Entrez Gene ID | 406797 |
Full Name | sorting nexin 5 |
Synonyms | id:ibd5091,wu:fa66c10,wu:fi28h04,zgc:55769 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » snx5 cDNA ORF clone
Gene Symbol | snx5 |
Entrez Gene ID | 406797 |
Full Name | sorting nexin 5 |
Synonyms | id:ibd5091,wu:fa66c10,wu:fi28h04,zgc:55769 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
NM_214769.1 | NP_999934.1 | sorting nexin-5 |
SNX5 | XP_001087384.2 | |
Canis lupus familiaris (dog) | SNX5 | XP_005634809.1 |
Gallus gallus (chicken) | SNX5 | NP_001006178.1 |
Bos taurus (cattle) | SNX5 | NP_001029636.1 |
Mus musculus (house mouse) | Snx5 | NP_077187.1 |
Xenopus tropicalis (tropical clawed frog) | snx5 | NP_001016081.1 |
Homo sapiens (human) | SNX5 | NP_055241.1 |
Pan troglodytes (chimpanzee) | SNX5 | XP_003316879.2 |
Danio rerio (zebrafish) | snx5 | NP_999934.1 |
Robust Identification of Developmentally Active Endothelial Enhancers in Zebrafish Using FANS-Assisted ATAC-Seq.
Quillien A, Abdalla M, Yu J, Ou J, Zhu LJ, Lawson ND
Cell reports20(3)709-720(2017 Jul)
RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)
miR-216a regulates snx5, a novel notch signaling pathway component, during zebrafish retinal development.
Olena AF, Rao MB, Thatcher EJ, Wu SY, Patton JG
Developmental biology400(1)72-81(2015 Apr)
An antiapoptotic role of sorting nexin 7 is required for liver development in zebrafish.
Xu L, Yin W, Xia J, Peng M, Li S, Lin S, Pei D, Shu X
Hepatology (Baltimore, Md.)55(6)1985-93(2012 Jun)
Zebrafish miR-1 and miR-133 shape muscle gene expression and regulate sarcomeric actin organization.
Mishima Y, Abreu-Goodger C, Staton AA, Stahlhut C, Shou C, Cheng C, Gerstein M, Enright AJ, Giraldez AJ
Genes & development23(5)619-32(2009 Mar)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
SNX5, precisely controlled by miR-216a, is a vital partner of Mib in promoting endocytosis of Delta and subsequent activation of Notch signaling.
Title: miR-216a regulates snx5, a novel notch signaling pathway component, during zebrafish retinal development.
Snx5, a novel interacting partner of Mind bomb, may have an essential role for cell fate determination in early development.
Title: Snx5, as a Mind bomb-binding protein, is expressed in hematopoietic and endothelial precursor cells in zebrafish.
The following snx5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the snx5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa33843 | |
Clone ID Related Accession (Same CDS sequence) | NM_214769.1 | |
Accession Version | NM_214769.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1200bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-11-23 | |
Organism | Danio rerio(zebrafish) | |
Product | sorting nexin-5 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC044479.1. On Aug 17, 2006 this sequence version replaced XM_697631.1. ##Evidence-Data-START## Transcript exon combination :: BC044479.1, BC075758.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGACGTCTA TTTCAGAGGA CAGCGATAAG GAGAAGGCAC GTTCTGTATC TGTTGACTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_999934.1 |
CDS | 64..1263 |
Translation |
Target ORF information:
Target ORF information:
|
NM_214769.1 |
1 | ATGACGTCTA TTTCAGAGGA CAGCGATAAG GAGAAGGCAC GTTCTGTATC TGTTGACTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Robust Identification of Developmentally Active Endothelial Enhancers in Zebrafish Using FANS-Assisted ATAC-Seq. |
RFX transcription factors are essential for hearing in mice. |
miR-216a regulates snx5, a novel notch signaling pathway component, during zebrafish retinal development. |
An antiapoptotic role of sorting nexin 7 is required for liver development in zebrafish. |
Zebrafish miR-1 and miR-133 shape muscle gene expression and regulate sarcomeric actin organization. |