Gene Symbol | tmem50a |
Entrez Gene ID | 406850 |
Full Name | transmembrane protein 50A |
Synonyms | fj33b04,wu:fj33b04,zgc:55322 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » tmem50a cDNA ORF clone
Gene Symbol | tmem50a |
Entrez Gene ID | 406850 |
Full Name | transmembrane protein 50A |
Synonyms | fj33b04,wu:fj33b04,zgc:55322 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_005157050.3 | XP_005157107.1 | transmembrane protein 50A isoform X1 |
XM_005157050.4 | XP_005157107.1 | transmembrane protein 50A isoform X1 |
NM_213529.2 | NP_998694.1 | transmembrane protein 50A |
TMEM50A | XP_002802282.1 | |
Danio rerio (zebrafish) | tmem50a | NP_998694.1 |
Canis lupus familiaris (dog) | TMEM50A | XP_005617841.1 |
Bos taurus (cattle) | TMEM50A | NP_001068631.1 |
Rattus norvegicus (Norway rat) | Tmem50a | NP_001120997.1 |
Xenopus tropicalis (tropical clawed frog) | tmem50a | NP_001096521.1 |
Homo sapiens (human) | TMEM50A | NP_055128.1 |
Gallus gallus (chicken) | TMEM50A | XP_001232925.3 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP005380 | XP_315390.3 |
Pan troglodytes (chimpanzee) | TMEM50A | XP_001138153.1 |
Mus musculus (house mouse) | Tmem50a | NP_082211.1 |
Drosophila melanogaster (fruit fly) | CG15012 | NP_001163347.1 |
Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)
Evolutionary and Expression Analyses Show Co-option of
Wang S, Yang Q, Wang Z, Feng S, Li H, Ji D, Zhang S
Frontiers in genetics8225(2017)
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following tmem50a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the tmem50a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa19108 | |
Clone ID Related Accession (Same CDS sequence) | XM_005157050.3 , XM_005157050.4 , NM_213529.2 | |
Accession Version | NM_213529.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 495bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-01-26 | |
Organism | Danio rerio(zebrafish) | |
Product | transmembrane protein 50A | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC044368.1. On Aug 31, 2012 this sequence version replaced NM_213529.1. ##Evidence-Data-START## Transcript exon combination :: BC044368.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTCGGGAT TTCTGGACGG GATCAGATGT GGCGATTGCG AGTGTAATGT GGACTGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_998694.1 |
CDS | 115..609 |
Translation |
Target ORF information:
Target ORF information:
|
NM_213529.2 |
1 | ATGTCGGGAT TTCTGGACGG GATCAGATGT GGCGATTGCG AGTGTAATGT GGACTGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa19108 | |
Clone ID Related Accession (Same CDS sequence) | XM_005157050.3 , XM_005157050.4 , NM_213529.2 | |
Accession Version | XM_005157050.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 495bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | transmembrane protein 50A isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007124.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005157050.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCGGGAT TTCTGGACGG GATCAGATGT GGCGATTGCG AGTGTAATGT GGACTGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005157107.1 |
CDS | 120..614 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005157050.3 |
1 | ATGTCGGGAT TTCTGGACGG GATCAGATGT GGCGATTGCG AGTGTAATGT GGACTGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa19108 | |
Clone ID Related Accession (Same CDS sequence) | XM_005157050.3 , XM_005157050.4 , NM_213529.2 | |
Accession Version | XM_005157050.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 495bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | transmembrane protein 50A isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007124.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005157050.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCGGGAT TTCTGGACGG GATCAGATGT GGCGATTGCG AGTGTAATGT GGACTGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005157107.1 |
CDS | 125..619 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005157050.4 |
1 | ATGTCGGGAT TTCTGGACGG GATCAGATGT GGCGATTGCG AGTGTAATGT GGACTGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Evolution of complexity in the zebrafish synapse proteome. |
Evolutionary and Expression Analyses Show Co-option of |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
RFX transcription factors are essential for hearing in mice. |