Gene Symbol | prpf18 |
Entrez Gene ID | 431751 |
Full Name | PRP18 pre-mRNA processing factor 18 homolog (yeast) |
Synonyms | zgc:91830 |
General protein information |
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Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » prpf18 cDNA ORF clone
gRNAs
Gene Symbol | prpf18 |
Entrez Gene ID | 431751 |
Full Name | PRP18 pre-mRNA processing factor 18 homolog (yeast) |
Synonyms | zgc:91830 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_021467629.1 | XP_021323304.1 | pre-mRNA-splicing factor 18 isoform X1 |
XM_017351913.1 | XP_017207402.1 | pre-mRNA-splicing factor 18 isoform X1 |
NM_001002204.1 | NP_001002204.1 | pre-mRNA-splicing factor 18 |
Homo sapiens (human) | PRPF18 | NP_003666.1 |
Pan troglodytes (chimpanzee) | PRPF18 | XP_001142416.1 |
Bos taurus (cattle) | PRPF18 | NP_001068791.1 |
Arabidopsis thaliana (thale cress) | AT1G03140 | NP_563676.1 |
Canis lupus familiaris (dog) | PRPF18 | XP_005617177.1 |
Danio rerio (zebrafish) | prpf18 | NP_001002204.1 |
Drosophila melanogaster (fruit fly) | Prp18 | NP_650776.1 |
Caenorhabditis elegans (roundworm) | F32B6.3 | NP_501776.2 |
Xenopus tropicalis (tropical clawed frog) | prpf18 | XP_002932023.2 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP002307 | XP_312664.3 |
Oryza sativa (rice) | Os07g0571900 | NP_001060054.1 |
PRPF18 | XP_001086905.1 | |
Mus musculus (house mouse) | Prpf18 | NP_080321.2 |
Rattus norvegicus (Norway rat) | Prpf18 | NP_612532.1 |
Gallus gallus (chicken) | PRPF18 | XP_004937548.1 |
A novel inducible mutagenesis screen enables to isolate and clone both embryonic and adult zebrafish mutants.
Ma Z, Zhu P, Pang M, Guo L, Chang N, Zheng J, Zhu X, Gao C, Huang H, Cui Z, Xiong JW, Peng J, Chen J
Scientific reports7(1)10381(2017 Sep)
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following prpf18 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the prpf18 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa38602 | |
Clone ID Related Accession (Same CDS sequence) | NM_001002204.1 | |
Accession Version | NM_001002204.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1029bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-21 | |
Organism | Danio rerio(zebrafish) | |
Product | pre-mRNA-splicing factor 18 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC074081.1. ##Evidence-Data-START## Transcript exon combination :: BC074081.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGACATCC TCAAAGCAGA GATTGCGAGG AAAAGAAAGC TCATCGAGGA GAAAGAGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001002204.1 |
CDS | 101..1129 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGACATCC TCAAAGCAGA GATTGCGAGG AAAAGAAAGC TCATCGAGGA GAAAGAGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa23102 | |
Clone ID Related Accession (Same CDS sequence) | XM_021467629.1 | |
Accession Version | XM_021467629.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1056bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | pre-mRNA-splicing factor 18 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007129.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGACATCC TCAAAGCAGA GATTGCGAGG AAAAGAAAGC TCATCGAGGA GAAAGAGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021323304.1 |
CDS | 190..1245 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGACATCC TCAAAGCAGA GATTGCGAGG AAAAGAAAGC TCATCGAGGA GAAAGAGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa55791 | |
Clone ID Related Accession (Same CDS sequence) | XM_017351913.1 | |
Accession Version | XM_017351913.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 885bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | pre-mRNA-splicing factor 18 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007129.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGACAAAC CTGAGGAGGA GGCGCCTCAG TCTACATCAG CCAATCCGGT GTTAGAACTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017207402.1 |
CDS | 636..1520 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGACAAAC CTGAGGAGGA GGCGCCTCAG TCTACATCAG CCAATCCGGT GTTAGAACTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A novel inducible mutagenesis screen enables to isolate and clone both embryonic and adult zebrafish mutants. |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |