Gene Symbol | kdm8 |
Entrez Gene ID | 436936 |
Full Name | lysine (K)-specific demethylase 8 |
Synonyms | jmjd5,zgc:173863,zgc:91962 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » kdm8 cDNA ORF clone
Gene Symbol | kdm8 |
Entrez Gene ID | 436936 |
Full Name | lysine (K)-specific demethylase 8 |
Synonyms | jmjd5,zgc:173863,zgc:91962 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_009299706.2 | XP_009297981.1 | lysine-specific demethylase 8 isoform X3 |
NM_001109869.2 | NP_001103339.2 | lysine-specific demethylase 8 |
XM_017353905.1 | XP_017209394.1 | lysine-specific demethylase 8 isoform X1 |
XM_009299706.3 | XP_009297981.1 | lysine-specific demethylase 8 isoform X2 |
XM_005164208.3 | XP_005164265.1 | lysine-specific demethylase 8 isoform X2 |
XM_005164208.4 | XP_005164265.1 | lysine-specific demethylase 8 isoform X1 |
Pan troglodytes (chimpanzee) | JMJD5 | XP_003315073.1 |
Danio rerio (zebrafish) | kdm8 | NP_001103339.2 |
Drosophila melanogaster (fruit fly) | CG13902 | NP_612063.2 |
JMJD5 | XP_001100489.1 | |
Xenopus tropicalis (tropical clawed frog) | kdm8 | NP_001121525.1 |
Homo sapiens (human) | KDM8 | NP_001138820.1 |
Canis lupus familiaris (dog) | KDM8 | XP_850038.1 |
Rattus norvegicus (Norway rat) | Kdm8 | NP_001032273.1 |
Arabidopsis thaliana (thale cress) | AT3G20810 | NP_850617.1 |
Oryza sativa (rice) | Os09g0489200 | NP_001063533.2 |
Mus musculus (house mouse) | Kdm8 | NP_084118.1 |
Oryza sativa (rice) | Os08g0508500 | NP_001175654.1 |
Bos taurus (cattle) | KDM8 | NP_001068807.1 |
Gallus gallus (chicken) | KDM8 | XP_414883.3 |
Caenorhabditis elegans (roundworm) | jmjd-5 | NP_505831.1 |
A network of epigenetic regulators guides developmental haematopoiesis in vivo.
Huang HT, Kathrein KL, Barton A, Gitlin Z, Huang YH, Ward TP, Hofmann O, Dibiase A, Song A, Tyekucheva S, Hide W, Zhou Y, Zon LI
Nature cell biology15(12)1516-25(2013 Dec)
Evolution of Class I cytokine receptors.
Liongue C, Ward AC
BMC evolutionary biology7120(2007 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following kdm8 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the kdm8 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa39054 | |
Clone ID Related Accession (Same CDS sequence) | NM_001109869.2 | |
Accession Version | NM_001109869.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1221bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-06-07 | |
Organism | Danio rerio(zebrafish) | |
Product | lysine-specific demethylase 8 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CT573829.7 and BX571715.10. On or before Jun 14, 2012 this sequence version replaced NM_001002663.1, NM_001109869.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: BC153446.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGCTTCGG TTTGGACAGA TATTCGGGCT GTTTTGCCCT CGACTGTGTC TGAATTTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001103339.2 |
CDS | 174..1394 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001109869.2 |
1 | ATGGCTTCGG TTTGGACAGA TATTCGGGCT GTTTTGCCCT CGACTGTGTC TGAATTTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa08672 | |
Clone ID Related Accession (Same CDS sequence) | XM_005164208.3 , XM_005164208.4 | |
Accession Version | XM_005164208.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 780bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | lysine-specific demethylase 8 isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007114.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005164208.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTCGG TTTGGACAGA TATTCGGGCT GTTTTGCCCT CGACTGTGTC TGAATTTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005164265.1 |
CDS | 330..1109 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005164208.3 |
1 | ATGGCTTCGG TTTGGACAGA TATTCGGGCT GTTTTGCCCT CGACTGTGTC TGAATTTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa08672 | |
Clone ID Related Accession (Same CDS sequence) | XM_005164208.3 , XM_005164208.4 | |
Accession Version | XM_005164208.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 780bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | lysine-specific demethylase 8 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007114.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005164208.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTCGG TTTGGACAGA TATTCGGGCT GTTTTGCCCT CGACTGTGTC TGAATTTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005164265.1 |
CDS | 301..1080 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005164208.4 |
1 | ATGGCTTCGG TTTGGACAGA TATTCGGGCT GTTTTGCCCT CGACTGTGTC TGAATTTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa41099 | |
Clone ID Related Accession (Same CDS sequence) | XM_009299706.2 , XM_009299706.3 | |
Accession Version | XM_009299706.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 675bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | lysine-specific demethylase 8 isoform X3 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007114.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009299706.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTCGG TTTGGACAGA TATTCGGGCT GTTTTGCCCT CGACTGTGTC TGAATTTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009297981.1 |
CDS | 330..1004 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009299706.2 |
1 | ATGGCTTCGG TTTGGACAGA TATTCGGGCT GTTTTGCCCT CGACTGTGTC TGAATTTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa41099 | |
Clone ID Related Accession (Same CDS sequence) | XM_009299706.2 , XM_009299706.3 | |
Accession Version | XM_009299706.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 675bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | lysine-specific demethylase 8 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007114.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_009299706.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTCGG TTTGGACAGA TATTCGGGCT GTTTTGCCCT CGACTGTGTC TGAATTTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009297981.1 |
CDS | 302..976 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009299706.3 |
1 | ATGGCTTCGG TTTGGACAGA TATTCGGGCT GTTTTGCCCT CGACTGTGTC TGAATTTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa58034 | |
Clone ID Related Accession (Same CDS sequence) | XM_017353905.1 | |
Accession Version | XM_017353905.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 843bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | lysine-specific demethylase 8 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007114.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTCGG TTTGGACAGA TATTCGGGCT GTTTTGCCCT CGACTGTGTC TGAATTTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017209394.1 |
CDS | 330..1172 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017353905.1 |
1 | ATGGCTTCGG TTTGGACAGA TATTCGGGCT GTTTTGCCCT CGACTGTGTC TGAATTTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A network of epigenetic regulators guides developmental haematopoiesis in vivo. |
Evolution of Class I cytokine receptors. |