pde6d cDNA ORF clone, Danio rerio(zebrafish)
| Gene Symbol | pde6d |
| Entrez Gene ID | 436981 |
| Full Name | phosphodiesterase 6D, cGMP-specific, rod, delta |
| Synonyms | zgc:92605 |
| General protein information |
|
| Gene Type | protein-coding |
| Organism | Danio rerio(zebrafish) |
mRNA and Protein(s)
| mRNA | Protein | Name |
|---|---|---|
| NM_001002708.1 | NP_001002708.1 | retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta |
| Homo sapiens (human) | PDE6D | NP_002592.1 |
| Canis lupus familiaris (dog) | PDE6D | NP_001003156.1 |
| Mus musculus (house mouse) | Pde6d | NP_032827.1 |
| Rattus norvegicus (Norway rat) | Pde6d | NP_001102276.1 |
| Gallus gallus (chicken) | PDE6D | XP_422739.3 |
| Drosophila melanogaster (fruit fly) | PrBP | NP_609246.1 |
| Pan troglodytes (chimpanzee) | PDE6D | XP_001144711.1 |
| Danio rerio (zebrafish) | pde6d | NP_001002708.1 |
| PDE6D | XP_001113642.1 | |
| Bos taurus (cattle) | PDE6D | NP_776845.1 |
| Xenopus tropicalis (tropical clawed frog) | pde6d | XP_002937389.1 |
| Anopheles gambiae (African malaria mosquito) | PDE6D_ANOGA | XP_320754.1 |
| Caenorhabditis elegans (roundworm) | pdl-1 | NP_495490.1 |
Related articles in PubMed
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
A homozygous PDE6D mutation in Joubert syndrome impairs targeting of farnesylated INPP5E protein to the primary cilium.
Thomas S, Wright KJ, Le Corre S, Micalizzi A, Romani M, Abhyankar A, Saada J, Perrault I, Amiel J, Litzler J, Filhol E, Elkhartoufi N, Kwong M, Casanova JL, Boddaert N, Baehr W, Lyonnet S, Munnich A, Burglen L, Chassaing N, Encha-Ravazi F, Vekemans M, Gleeson JG, Valente EM, Jackson PK, Drummond IA, Saunier S, Atti?-Bitach T
Human mutation35(1)137-46(2014 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following pde6d gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the pde6d cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | ODa00614 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001002708.1 | |
| Accession Version | NM_001002708.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 453bp) Protein sequence SNP |
|
| Vector | pcDNA3.1+/C-(K)DYK or customized vector |  User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-08-05 | |
| Organism | Danio rerio(zebrafish) | |
| Product | retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta | |
| Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076096.1. ##Evidence-Data-START## Transcript exon combination :: BC076096.1, CF549913.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGTCTTCGG ACGAAGACAG AGCGAAGGAG ATTCTGAAGG GGTTTAAACT AAACTGGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001002708.1 |
| CDS | 195..647 |
| Translation |
Target ORF information:
Target ORF information:
|
 NM_001002708.1 |
ORF Insert Sequence:
1 | ATGTCTTCGG ACGAAGACAG AGCGAAGGAG ATTCTGAAGG GGTTTAAACT AAACTGGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
|
A homozygous PDE6D mutation in Joubert syndrome impairs targeting of farnesylated INPP5E protein to the primary cilium. |