Gene Symbol | st6gal1 |
Entrez Gene ID | 445376 |
Full Name | ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 |
Synonyms | siat1,zgc:136454 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » st6gal1 cDNA ORF clone
gRNAs
Gene Symbol | st6gal1 |
Entrez Gene ID | 445376 |
Full Name | ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 |
Synonyms | siat1,zgc:136454 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_005161298.4 | XP_005161355.1 | beta-galactoside alpha-2,6-sialyltransferase 1 isoform X1 |
XM_005161298.3 | XP_005161355.1 | beta-galactoside alpha-2,6-sialyltransferase 1 isoform X1 |
NM_001003853.1 | NP_001003853.1 | beta-galactoside alpha-2,6-sialyltransferase 1 |
XM_005161299.3 | XP_005161356.1 | beta-galactoside alpha-2,6-sialyltransferase 1 isoform X2 |
XM_005161299.4 | XP_005161356.1 | beta-galactoside alpha-2,6-sialyltransferase 1 isoform X2 |
Homo sapiens (human) | ST6GAL1 | NP_775323.1 |
Canis lupus familiaris (dog) | ST6GAL1 | XP_535839.2 |
Mus musculus (house mouse) | St6gal1 | NP_001239434.1 |
Rattus norvegicus (Norway rat) | St6gal1 | NP_001106815.1 |
ST6GAL1 | XP_002803101.1 | |
Bos taurus (cattle) | ST6GAL1 | NP_803483.1 |
Gallus gallus (chicken) | ST6GAL1 | NP_990572.1 |
Pan troglodytes (chimpanzee) | ST6GAL1 | NP_001032368.1 |
Danio rerio (zebrafish) | st6gal1 | NP_001003853.1 |
Xenopus tropicalis (tropical clawed frog) | st6gal1 | NP_001243216.1 |
Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)
Mapping the expressed glycome and glycosyltransferases of zebrafish liver cells as a relevant model system for glycosylation studies.
Vanbeselaere J, Chang LY, Harduin-Lepers A, Fabre E, Yamakawa N, Slomianny C, Biot C, Khoo KH, Guerardel Y
Journal of proteome research11(4)2164-77(2012 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following st6gal1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the st6gal1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa33600 | |
Clone ID Related Accession (Same CDS sequence) | NM_001003853.1 | |
Accession Version | NM_001003853.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1455bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-16 | |
Organism | Danio rerio(zebrafish) | |
Product | beta-galactoside alpha-2,6-sialyltransferase 1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AJ744801.1. ##Evidence-Data-START## Transcript exon combination :: AJ744801.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168447, SAMEA3505379 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGATCGTG TTAGCCTACT TTGGCGATTG AGGCGTCGGG CTCGTCGAGG GGCCCTATGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001003853.1 |
CDS | 1..1455 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGATCGTG TTAGCCTACT TTGGCGATTG AGGCGTCGGG CTCGTCGAGG GGCCCTATGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa26033 | |
Clone ID Related Accession (Same CDS sequence) | XM_005161298.4 , XM_005161298.3 | |
Accession Version | XM_005161298.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1488bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | beta-galactoside alpha-2,6-sialyltransferase 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007132.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005161298.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGATGG CATACAAGAT CCCAGGGGCT GCTATGGATC GTGTTAGCCT ACTTTGGCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005161355.1 |
CDS | 608..2095 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAAGATGG CATACAAGAT CCCAGGGGCT GCTATGGATC GTGTTAGCCT ACTTTGGCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa26033 | |
Clone ID Related Accession (Same CDS sequence) | XM_005161298.4 , XM_005161298.3 | |
Accession Version | XM_005161298.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1488bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | beta-galactoside alpha-2,6-sialyltransferase 1 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007132.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005161298.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGATGG CATACAAGAT CCCAGGGGCT GCTATGGATC GTGTTAGCCT ACTTTGGCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005161355.1 |
CDS | 602..2089 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAAGATGG CATACAAGAT CCCAGGGGCT GCTATGGATC GTGTTAGCCT ACTTTGGCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa26034 | |
Clone ID Related Accession (Same CDS sequence) | XM_005161299.3 , XM_005161299.4 | |
Accession Version | XM_005161299.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1455bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | beta-galactoside alpha-2,6-sialyltransferase 1 isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007132.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005161299.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATCGTG TTAGCCTACT TTGGCGATTG AGGCGTCGGG CTCGTCGAGG GGCCCTATGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005161356.1 |
CDS | 86..1540 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGATCGTG TTAGCCTACT TTGGCGATTG AGGCGTCGGG CTCGTCGAGG GGCCCTATGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa26034 | |
Clone ID Related Accession (Same CDS sequence) | XM_005161299.3 , XM_005161299.4 | |
Accession Version | XM_005161299.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1455bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | beta-galactoside alpha-2,6-sialyltransferase 1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007132.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005161299.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATCGTG TTAGCCTACT TTGGCGATTG AGGCGTCGGG CTCGTCGAGG GGCCCTATGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005161356.1 |
CDS | 81..1535 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGATCGTG TTAGCCTACT TTGGCGATTG AGGCGTCGGG CTCGTCGAGG GGCCCTATGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Evolution of complexity in the zebrafish synapse proteome. |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
RFX transcription factors are essential for hearing in mice. |
Mapping the expressed glycome and glycosyltransferases of zebrafish liver cells as a relevant model system for glycosylation studies. |