Gene Symbol | tars1 |
Entrez Gene ID | 449661 |
Full Name | threonyl-tRNA synthetase |
Synonyms | ThrRS,wu:fb07c05,wu:fb39c12,zgc:92586 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » tars1 cDNA ORF clone
Gene Symbol | tars1 |
Entrez Gene ID | 449661 |
Full Name | threonyl-tRNA synthetase |
Synonyms | ThrRS,wu:fb07c05,wu:fb39c12,zgc:92586 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_021476098.1 | XP_021331773.1 | threonine--tRNA ligase, cytoplasmic isoform X1 |
NM_001005932.2 | NP_001005932.1 | threonine--tRNA ligase, cytoplasmic isoform 2 |
NM_001122786.1 | NP_001116258.1 | threonine--tRNA ligase, cytoplasmic isoform 1 |
Danio rerio (zebrafish) | tars | NP_001116258.1 |
Drosophila melanogaster (fruit fly) | Aats-thr | NP_524839.3 |
Caenorhabditis elegans (roundworm) | tars-1 | NP_001022033.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_03551 | XP_003716364.1 |
Arabidopsis thaliana (thale cress) | AT5G26830 | NP_198035.2 |
Rattus norvegicus (Norway rat) | Tars | NP_001006977.1 |
Gallus gallus (chicken) | TARS | NP_001026618.1 |
Saccharomyces cerevisiae (baker's yeast) | THS1 | NP_116578.3 |
Schizosaccharomyces pombe (fission yeast) | trs1 | NP_596364.1 |
Canis lupus familiaris (dog) | TARS | XP_536509.3 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP008929 | XP_319682.4 |
Eremothecium gossypii | AGOS_ACL039W | NP_983365.1 |
Neurospora crassa | NCU02380 | XP_959801.1 |
Homo sapiens (human) | TARS | NP_001245367.1 |
Oryza sativa (rice) | Os08g0295300 | NP_001061475.1 |
Xenopus tropicalis (tropical clawed frog) | tars | NP_001001219.1 |
Pan troglodytes (chimpanzee) | TARS | XP_003310808.1 |
Bos taurus (cattle) | TARS | NP_001029542.1 |
Mus musculus (house mouse) | Tars | NP_149065.2 |
Kluyveromyces lactis | KLLA0F05918g | XP_455348.1 |
Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)
A single Danio rerio hars gene encodes both cytoplasmic and mitochondrial histidyl-tRNA synthetases.
Waldron AL, Cahan SH, Franklyn CS, Ebert AM
PloS one12(9)e0185317(2017)
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
Noncanonical function of threonyl-tRNA synthetase regulates vascular development in zebrafish.
Cao Z, Wang H, Mao X, Luo L
Biochemical and biophysical research communications473(1)67-72(2016 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Mutations in threonyl tRNA synthetase (tars(y58)) leads to increased branching angiogenesis in developing zebrafish.
Title: Aminoacyl-Transfer RNA Synthetase Deficiency Promotes Angiogenesis via the Unfolded Protein Response Pathway.
noncanonical function of tars regulates vascular development presumably by modulating the expression of vegfa
Title: Noncanonical function of threonyl-tRNA synthetase regulates vascular development in zebrafish.
The following tars1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the tars1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa31668 | |
Clone ID Related Accession (Same CDS sequence) | NM_001005932.2 | |
Accession Version | NM_001005932.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1875bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-27 | |
Organism | Danio rerio(zebrafish) | |
Product | threonine--tRNA ligase, cytoplasmic isoform 2 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC083525.1. On Aug 30, 2012 this sequence version replaced NM_001005932.1. ##Evidence-Data-START## Transcript exon combination :: BC083525.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGCGGATG AGAGTGTGAC TGATCAATTG AAAGAACTGA AAATGGAAGA AAAGAAGAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001005932.1 |
CDS | 90..1964 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001005932.2 |
1 | ATGGCGGATG AGAGTGTGAC TGATCAATTG AAAGAACTGA AAATGGAAGA AAAGAAGAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa32857 | |
Clone ID Related Accession (Same CDS sequence) | NM_001122786.1 | |
Accession Version | NM_001122786.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2157bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-27 | |
Organism | Danio rerio(zebrafish) | |
Product | threonine--tRNA ligase, cytoplasmic isoform 1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC154371.1. Transcript Variant: This variant (1) encodes the longer protein (isoform 1). ##Evidence-Data-START## Transcript exon combination :: BC154371.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168447, SAMEA2168448 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCGGATG AGAGTGTGAC TGATCAATTG AAAGAACTGA AAATGGAAGA AAAGAAGAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001116258.1 |
CDS | 77..2233 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001122786.1 |
1 | ATGGCGGATG AGAGTGTGAC TGATCAATTG AAAGAACTGA AAATGGAAGA AAAGAAGAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa41267 | |
Clone ID Related Accession (Same CDS sequence) | XM_021476098.1 | |
Accession Version | XM_021476098.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1692bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | threonine--tRNA ligase, cytoplasmic isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007116.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGAGAGG CCATGGAGAG AGTTTATGGT GGCTGCCTAT GTTACGGACC ACCCATCGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021331773.1 |
CDS | 513..2204 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021476098.1 |
1 | ATGGGAGAGG CCATGGAGAG AGTTTATGGT GGCTGCCTAT GTTACGGACC ACCCATCGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Evolution of complexity in the zebrafish synapse proteome. |
A single Danio rerio hars gene encodes both cytoplasmic and mitochondrial histidyl-tRNA synthetases. |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
Noncanonical function of threonyl-tRNA synthetase regulates vascular development in zebrafish. |