Gene Symbol | DPH6 |
Entrez Gene ID | 503603 |
Full Name | diphthamine biosynthesis 6 |
Synonyms | atpbd4,si:ch1073-258j7.1,wu:fc57a01,zgc:110758 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(Zebrafish) |
ORF » Species Summary » Danio rerio » DPH6 cDNA ORF clone
Gene Symbol | DPH6 |
Entrez Gene ID | 503603 |
Full Name | diphthamine biosynthesis 6 |
Synonyms | atpbd4,si:ch1073-258j7.1,wu:fc57a01,zgc:110758 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(Zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_017351632.2 | XP_017207121.2 | diphthine--ammonia ligase isoform X1 |
NM_001013290.2 | NP_001013308.2 | diphthine--ammonia ligase |
XM_017351632.1 | XP_017207121.1 | diphthine--ammonia ligase isoform X1 |
ATPBD4 | XP_001089692.2 | |
Drosophila melanogaster (fruit fly) | CG1578 | NP_572749.2 |
Kluyveromyces lactis | KLLA0D16984g | XP_453811.1 |
Eremothecium gossypii | AGOS_AGL164W | NP_986503.1 |
Schizosaccharomyces pombe (fission yeast) | mug71 | NP_595310.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_00500 | XP_003718561.1 |
Pan troglodytes (chimpanzee) | ATPBD4 | XP_001135595.2 |
Canis lupus familiaris (dog) | DPH6 | XP_005638265.1 |
Mus musculus (house mouse) | Dph6 | NP_079951.1 |
Rattus norvegicus (Norway rat) | Dph6 | NP_001014203.1 |
Saccharomyces cerevisiae (baker's yeast) | DPH6 | NP_013244.1 |
Neurospora crassa | NCU02670 | XP_965443.2 |
Xenopus tropicalis (tropical clawed frog) | dph6 | XP_002932882.1 |
Homo sapiens (human) | DPH6 | NP_542381.1 |
Bos taurus (cattle) | DPH6 | NP_001070484.1 |
Danio rerio (zebrafish) | dph6 | NP_001013308.2 |
Caenorhabditis elegans (roundworm) | E01A2.5 | NP_491303.3 |
Gallus gallus (chicken) | ATPBD4 | NP_001186639.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP001943 | XP_321119.5 |
RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)
Misty somites, a maternal effect gene identified by transposon-mediated insertional mutagenesis in zebrafish that is essential for the somite boundary maintenance.
Kotani T, Kawakami K
Developmental biology316(2)383-96(2008 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following DPH6 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the DPH6 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa03205 | |
Clone ID Related Accession (Same CDS sequence) | NM_001013290.2 | |
Accession Version | NM_001013290.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 768bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-11-23 | |
Organism | Danio rerio(zebrafish) | |
Product | diphthine--ammonia ligase | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC133118.1. On Feb 11, 2007 this sequence version replaced NM_001013290.1. ##Evidence-Data-START## Transcript exon combination :: BC133118.1, EH491372.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAGGGTGG TCGGGCTCAT CAGTGGCGGC AAGGACAGCT GCTTTAACAT GCTGCAGTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001013308.2 |
CDS | 95..862 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001013290.2 |
1 | ATGAGGGTGG TCGGGCTCAT CAGTGGCGGC AAGGACAGCT GCTTTAACAT GCTGCAGTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa149539 | |
Clone ID Related Accession (Same CDS sequence) | XM_017351632.2 | |
Accession Version | XM_017351632.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2055bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | diphthine--ammonia ligase isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007128.7) and transcript sequence (GDQH01007575.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_017351632.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 240 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END## |
1 | ATGAGGGTGG TCGGGCTCAT CAGTGGCGGC AAGGACAGCT GCTTTAACAT GCTGCAGTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017207121.2 |
CDS | 129..2183 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017351632.2 |
1 | ATGAGGGTGG TCGGGCTCAT CAGTGGCGGC AAGGACAGCT GCTTTAACAT GCTGCAGTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa55576 | |
Clone ID Related Accession (Same CDS sequence) | XM_017351632.1 | |
Accession Version | XM_017351632.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2055bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | diphthine--ammonia ligase isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007128.6) and transcript sequence (GDQH01007575.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 240 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END## |
1 | ATGAGGGTGG TCGGGCTCAT CAGTGGCGGC AAGGACAGCT GCTTTAACAT GCTGCAGTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017207121.1 |
CDS | 179..2233 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017351632.1 |
1 | ATGAGGGTGG TCGGGCTCAT CAGTGGCGGC AAGGACAGCT GCTTTAACAT GCTGCAGTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RFX transcription factors are essential for hearing in mice. |
Misty somites, a maternal effect gene identified by transposon-mediated insertional mutagenesis in zebrafish that is essential for the somite boundary maintenance. |