Gene Symbol |
nle1 |
Entrez Gene ID |
553606 |
Full Name |
notchless homolog 1 (Drosophila) |
Synonyms |
fc12b09,fc45f01,wu:fc12b09,wu:fc45f01,zgc:110281 |
General protein information |
- Preferred Names
notchless homolog 1 (Drosophila)
Names
notchless protein homolog 1
|
Gene Type |
protein-coding |
Organism |
Danio rerio(zebrafish) |
Pan troglodytes (chimpanzee) |
NLE1 |
XP_001174396.2 |
|
NLE1 |
XP_001113853.1 |
Mus musculus (house mouse) |
Nle1 |
NP_663406.2 |
Anopheles gambiae (African malaria mosquito) |
AgaP_AGAP002221 |
XP_307962.4 |
Schizosaccharomyces pombe (fission yeast) |
SPCC18.05c |
NP_588384.1 |
Neurospora crassa |
NCU00794 |
XP_964950.1 |
Rattus norvegicus (Norway rat) |
Nle1 |
NP_001121006.1 |
Caenorhabditis elegans (roundworm) |
W07E6.2 |
NP_493745.1 |
Kluyveromyces lactis |
KLLA0C08547g |
XP_452581.1 |
Eremothecium gossypii |
AGOS_AER263C |
NP_985120.1 |
Homo sapiens (human) |
NLE1 |
NP_060566.2 |
Canis lupus familiaris (dog) |
NLE1 |
XP_005624858.1 |
Danio rerio (zebrafish) |
nle1 |
NP_001018418.1 |
Drosophila melanogaster (fruit fly) |
Nle |
NP_477294.2 |
Gallus gallus (chicken) |
NLE1 |
XP_415857.3 |
Saccharomyces cerevisiae (baker's yeast) |
RSA4 |
NP_009997.2 |
Oryza sativa (rice) |
Os11g0594200 |
NP_001068204.1 |
Bos taurus (cattle) |
NLE1 |
NP_001014887.1 |
Magnaporthe oryzae (rice blast fungus) |
MGG_08708 |
XP_003719269.1 |
Arabidopsis thaliana (thale cress) |
AT5G52820 |
NP_200094.1 |
Oryza sativa (rice) |
Os10g0104500 |
NP_001064020.1 |
Xenopus tropicalis (tropical clawed frog) |
nle1 |
NP_001072540.1 |
Related articles in PubMed
RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)
Zebrafish midbrain slow-amplifying progenitors exhibit high levels of transcripts for nucleotide and ribosome biogenesis.
Recher G, Jouralet J, Brombin A, Heuz? A, Mugniery E, Hermel JM, Desnoulez S, Savy T, Herbomel P, Bourrat F, Peyri?ras N, Jamen F, Joly JS
Development (Cambridge, England)140(24)4860-9(2013 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following nle1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the nle1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
ODa16090 |
Clone ID Related Accession (Same CDS sequence) |
NM_001328517.1
, NM_001328516.1
|
Accession Version |
NM_001328517.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1431bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-11-23 |
Organism |
Danio rerio(zebrafish) |
Product |
notchless protein homolog 1 |
Comment |
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CR926463.9. On Jun 16, 2016 this sequence version replaced XM_005155261.2.
Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Both variants 1 and 2 encode the same protein.
Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments.
##Evidence-Data-START##
CDS exon combination :: GDQH01009948.1, GDQQ01003958.1 [ECO:0000331]
RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350]
##Evidence-Data-END##
##RefSeq-Attributes-START##
inferred exon combination :: based on alignments, homology
##RefSeq-Attributes-END##
COMPLETENESS: complete on the 3' end.
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381
| ATGAGCGCGG ATGTGGAGCG TGTGTTGATC CAGCTCCAGG ATGAGGCCGG TGAGGTGCTC GGGTCTCCCT TTGATGTGCC GCTGGACATC AGTCCGGACA AACTGCAGCT GGTCTGCAAT GCGCTCTTAC AGAAGGAAGA GCCGGTGCCT TTCTTGTTCT TTGTGAAAGA TGCAGAGCTG GTGTCGTCTC TGGGCTCCTG CATTCAGACA TTGGGTCTGG AGACGGAGCA GGTGCTACCG GTGGTGTATC AGCCACAGGC TGTATTTCGT GTGCGGGCTG TGGCTCGGTG CACCAGCTCT CTGGAGGGCC ACACTGAGGC CGTCATATCT GTGGCATTCA GCCCGACTGG AAAATATCTG GCCAGTGGAT CTGGAGACAC GACAGTGAGG TTTTGGGATC TGAGCACAGA AACACCACAT CACACTTCTA GAGGACACAC ACACTGGGTT TTGTCCATTG CTTGGTCTCC AGATGGAAAG AAATTAGCAT CAGGCTGCAA AAACAGTCAG ATTTTCTTGT GGGATCCAGT CACAGGCAAA CAGATTGGAA AGACTTTGAC AGGACATACA AAGTGGATCA CCTGGCTGTG CTGGGAACCT CTCCATTTAA ACCCAGAGTG TCGCTATTTG GCAAGCACCA GTAAAGACTG TACGATTCGC ATATGGGACA CTGTTTTGGG TCACTATGAC AAGATCCTAA CAGGACACAC ACACTCTGTG ACGTGTGTGA AATGGGGAGG CGATGGTCTC CTCTACACAT CATCTCAGGA TAGGACTATT AAAGTCTGGA GAGCCAAAGA TGGTGTTCAG TGTCGTACAC TGCAAGGTCA CGCTCACTGG GTGAACACAC TGGCCCTCAG CACTGACTAT GTCCTGCGTA CAGGAGCATT TGAACCCGCG AACGCAACCA TAAACCCTCA GGATCTCACC GGATCATTGG AAGAGATCAA GGAAAAGGCT TTGAAGCGCT ACAACAGTGT CAGAGGTGAA GGTCATGAGA GGCTGGTTTC TGGATCAGAC GACTTCACCA TGTTCTTATG GAACCCAGCA GAGGACAAGA AGCCGGTCGC TCGTCTAACA GGTCACCAAG CATTGGTCAA TGAGGTGCTC TTCTCACCCG ACACACGACT CATAGCCAGC GCTTCCTTCG ACAAGTCCAT TAAGATCTGG GATGGAAAAA CAGGAAAATA TCTGAATTCA CTGCGGGGCC ACGTCGGGCC TGTGTACCAG GTGGCATGGT CAGCAGACAG TCGCCTGTTG GTCAGCGGCA GCAGTGACAG CACTCTGAAG GTGTGGGACA TCAAAACGGG AAAACTGAAC GCAGACCTGC CCGGCCATGC TGACGAGGTT TTTGCAGTCG ACTGGAGTCC TGATGGACAG CGAGTGGCCA GCGGAGGGAA AGACAAATGT TTAAGGATAT GGAGGAAGTA A |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001315446.1 |
CDS | 92..1522 |
Translation | |
Target ORF information:
RefSeq Version | NM_001328517.1 |
Organism | Danio rerio(zebrafish) |
Definition | Danio rerio notchless homolog 1 (Drosophila) (nle1), transcript variant 2, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001328517.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381
| ATGAGCGCGG ATGTGGAGCG TGTGTTGATC CAGCTCCAGG ATGAGGCCGG TGAGGTGCTC GGGTCTCCCT TTGATGTGCC GCTGGACATC AGTCCGGACA AACTGCAGCT GGTCTGCAAT GCGCTCTTAC AGAAGGAAGA GCCGGTGCCT TTCTTGTTCT TTGTGAAAGA TGCAGAGCTG GTGTCGTCTC TGGGCTCCTG CATTCAGACA TTGGGTCTGG AGACGGAGCA GGTGCTACCG GTGGTGTATC AGCCACAGGC TGTATTTCGT GTGCGGGCTG TGGCTCGGTG CACCAGCTCT CTGGAGGGCC ACACTGAGGC CGTCATATCT GTGGCATTCA GCCCGACTGG AAAATATCTG GCCAGTGGAT CTGGAGACAC GACAGTGAGG TTTTGGGATC TGAGCACAGA AACACCACAT CACACTTCTA GAGGACACAC ACACTGGGTT TTGTCCATTG CTTGGTCTCC AGATGGAAAG AAATTAGCAT CAGGCTGCAA AAACAGTCAG ATTTTCTTGT GGGATCCAGT CACAGGCAAA CAGATTGGAA AGACTTTGAC AGGACATACA AAGTGGATCA CCTGGCTGTG CTGGGAACCT CTCCATTTAA ACCCAGAGTG TCGCTATTTG GCAAGCACCA GTAAAGACTG TACGATTCGC ATATGGGACA CTGTTTTGGG TCACTATGAC AAGATCCTAA CAGGACACAC ACACTCTGTG ACGTGTGTGA AATGGGGAGG CGATGGTCTC CTCTACACAT CATCTCAGGA TAGGACTATT AAAGTCTGGA GAGCCAAAGA TGGTGTTCAG TGTCGTACAC TGCAAGGTCA CGCTCACTGG GTGAACACAC TGGCCCTCAG CACTGACTAT GTCCTGCGTA CAGGAGCATT TGAACCCGCG AACGCAACCA TAAACCCTCA GGATCTCACC GGATCATTGG AAGAGATCAA GGAAAAGGCT TTGAAGCGCT ACAACAGTGT CAGAGGTGAA GGTCATGAGA GGCTGGTTTC TGGATCAGAC GACTTCACCA TGTTCTTATG GAACCCAGCA GAGGACAAGA AGCCGGTCGC TCGTCTAACA GGTCACCAAG CATTGGTCAA TGAGGTGCTC TTCTCACCCG ACACACGACT CATAGCCAGC GCTTCCTTCG ACAAGTCCAT TAAGATCTGG GATGGAAAAA CAGGAAAATA TCTGAATTCA CTGCGGGGCC ACGTCGGGCC TGTGTACCAG GTGGCATGGT CAGCAGACAG TCGCCTGTTG GTCAGCGGCA GCAGTGACAG CACTCTGAAG GTGTGGGACA TCAAAACGGG AAAACTGAAC GCAGACCTGC CCGGCCATGC TGACGAGGTT TTTGCAGTCG ACTGGAGTCC TGATGGACAG CGAGTGGCCA GCGGAGGGAA AGACAAATGT TTAAGGATAT GGAGGAAGTA A |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
ODa16090 |
Clone ID Related Accession (Same CDS sequence) |
NM_001328517.1
, NM_001328516.1
|
Accession Version |
NM_001328516.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1431bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-11-23 |
Organism |
Danio rerio(zebrafish) |
Product |
notchless protein homolog 1 |
Comment |
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CR926463.9. On Jun 16, 2016 this sequence version replaced XM_005155262.2.
Transcript Variant: This variant (1) represents the longer transcript. Both variants 1 and 2 encode the same protein.
Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments.
##Evidence-Data-START##
Transcript exon combination :: BC154356.1 [ECO:0000332]
RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381
| ATGAGCGCGG ATGTGGAGCG TGTGTTGATC CAGCTCCAGG ATGAGGCCGG TGAGGTGCTC GGGTCTCCCT TTGATGTGCC GCTGGACATC AGTCCGGACA AACTGCAGCT GGTCTGCAAT GCGCTCTTAC AGAAGGAAGA GCCGGTGCCT TTCTTGTTCT TTGTGAAAGA TGCAGAGCTG GTGTCGTCTC TGGGCTCCTG CATTCAGACA TTGGGTCTGG AGACGGAGCA GGTGCTACCG GTGGTGTATC AGCCACAGGC TGTATTTCGT GTGCGGGCTG TGGCTCGGTG CACCAGCTCT CTGGAGGGCC ACACTGAGGC CGTCATATCT GTGGCATTCA GCCCGACTGG AAAATATCTG GCCAGTGGAT CTGGAGACAC GACAGTGAGG TTTTGGGATC TGAGCACAGA AACACCACAT CACACTTCTA GAGGACACAC ACACTGGGTT TTGTCCATTG CTTGGTCTCC AGATGGAAAG AAATTAGCAT CAGGCTGCAA AAACAGTCAG ATTTTCTTGT GGGATCCAGT CACAGGCAAA CAGATTGGAA AGACTTTGAC AGGACATACA AAGTGGATCA CCTGGCTGTG CTGGGAACCT CTCCATTTAA ACCCAGAGTG TCGCTATTTG GCAAGCACCA GTAAAGACTG TACGATTCGC ATATGGGACA CTGTTTTGGG TCACTATGAC AAGATCCTAA CAGGACACAC ACACTCTGTG ACGTGTGTGA AATGGGGAGG CGATGGTCTC CTCTACACAT CATCTCAGGA TAGGACTATT AAAGTCTGGA GAGCCAAAGA TGGTGTTCAG TGTCGTACAC TGCAAGGTCA CGCTCACTGG GTGAACACAC TGGCCCTCAG CACTGACTAT GTCCTGCGTA CAGGAGCATT TGAACCCGCG AACGCAACCA TAAACCCTCA GGATCTCACC GGATCATTGG AAGAGATCAA GGAAAAGGCT TTGAAGCGCT ACAACAGTGT CAGAGGTGAA GGTCATGAGA GGCTGGTTTC TGGATCAGAC GACTTCACCA TGTTCTTATG GAACCCAGCA GAGGACAAGA AGCCGGTCGC TCGTCTAACA GGTCACCAAG CATTGGTCAA TGAGGTGCTC TTCTCACCCG ACACACGACT CATAGCCAGC GCTTCCTTCG ACAAGTCCAT TAAGATCTGG GATGGAAAAA CAGGAAAATA TCTGAATTCA CTGCGGGGCC ACGTCGGGCC TGTGTACCAG GTGGCATGGT CAGCAGACAG TCGCCTGTTG GTCAGCGGCA GCAGTGACAG CACTCTGAAG GTGTGGGACA TCAAAACGGG AAAACTGAAC GCAGACCTGC CCGGCCATGC TGACGAGGTT TTTGCAGTCG ACTGGAGTCC TGATGGACAG CGAGTGGCCA GCGGAGGGAA AGACAAATGT TTAAGGATAT GGAGGAAGTA A |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001315445.1 |
CDS | 135..1565 |
Translation | |
Target ORF information:
RefSeq Version | NM_001328516.1 |
Organism | Danio rerio(zebrafish) |
Definition | Danio rerio notchless homolog 1 (Drosophila) (nle1), transcript variant 1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001328516.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381
| ATGAGCGCGG ATGTGGAGCG TGTGTTGATC CAGCTCCAGG ATGAGGCCGG TGAGGTGCTC GGGTCTCCCT TTGATGTGCC GCTGGACATC AGTCCGGACA AACTGCAGCT GGTCTGCAAT GCGCTCTTAC AGAAGGAAGA GCCGGTGCCT TTCTTGTTCT TTGTGAAAGA TGCAGAGCTG GTGTCGTCTC TGGGCTCCTG CATTCAGACA TTGGGTCTGG AGACGGAGCA GGTGCTACCG GTGGTGTATC AGCCACAGGC TGTATTTCGT GTGCGGGCTG TGGCTCGGTG CACCAGCTCT CTGGAGGGCC ACACTGAGGC CGTCATATCT GTGGCATTCA GCCCGACTGG AAAATATCTG GCCAGTGGAT CTGGAGACAC GACAGTGAGG TTTTGGGATC TGAGCACAGA AACACCACAT CACACTTCTA GAGGACACAC ACACTGGGTT TTGTCCATTG CTTGGTCTCC AGATGGAAAG AAATTAGCAT CAGGCTGCAA AAACAGTCAG ATTTTCTTGT GGGATCCAGT CACAGGCAAA CAGATTGGAA AGACTTTGAC AGGACATACA AAGTGGATCA CCTGGCTGTG CTGGGAACCT CTCCATTTAA ACCCAGAGTG TCGCTATTTG GCAAGCACCA GTAAAGACTG TACGATTCGC ATATGGGACA CTGTTTTGGG TCACTATGAC AAGATCCTAA CAGGACACAC ACACTCTGTG ACGTGTGTGA AATGGGGAGG CGATGGTCTC CTCTACACAT CATCTCAGGA TAGGACTATT AAAGTCTGGA GAGCCAAAGA TGGTGTTCAG TGTCGTACAC TGCAAGGTCA CGCTCACTGG GTGAACACAC TGGCCCTCAG CACTGACTAT GTCCTGCGTA CAGGAGCATT TGAACCCGCG AACGCAACCA TAAACCCTCA GGATCTCACC GGATCATTGG AAGAGATCAA GGAAAAGGCT TTGAAGCGCT ACAACAGTGT CAGAGGTGAA GGTCATGAGA GGCTGGTTTC TGGATCAGAC GACTTCACCA TGTTCTTATG GAACCCAGCA GAGGACAAGA AGCCGGTCGC TCGTCTAACA GGTCACCAAG CATTGGTCAA TGAGGTGCTC TTCTCACCCG ACACACGACT CATAGCCAGC GCTTCCTTCG ACAAGTCCAT TAAGATCTGG GATGGAAAAA CAGGAAAATA TCTGAATTCA CTGCGGGGCC ACGTCGGGCC TGTGTACCAG GTGGCATGGT CAGCAGACAG TCGCCTGTTG GTCAGCGGCA GCAGTGACAG CACTCTGAAG GTGTGGGACA TCAAAACGGG AAAACTGAAC GCAGACCTGC CCGGCCATGC TGACGAGGTT TTTGCAGTCG ACTGGAGTCC TGATGGACAG CGAGTGGCCA GCGGAGGGAA AGACAAATGT TTAAGGATAT GGAGGAAGTA A |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R |
 |
Zebrafish midbrain slow-amplifying progenitors exhibit high levels of transcripts for nucleotide and ribosome biogenesis.
Development (Cambridge, England)140(24)4860-9(2013 Dec)
Recher G,Jouralet J,Brombin A,Heuz? A,Mugniery E,Hermel JM,Desnoulez S,Savy T,Herbomel P,Bourrat F,Peyri?ras N,Jamen F,Joly JS |