Gene Symbol | zgc:162613 |
Entrez Gene ID | 555936 |
Full Name | zgc:162613 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » zgc:162613 cDNA ORF clone
Gene Symbol | zgc:162613 |
Entrez Gene ID | 555936 |
Full Name | zgc:162613 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_005164030.4 | XP_005164087.1 | RUS1 family protein C16orf58 homolog isoform X1 |
XM_005164031.4 | XP_005164088.1 | RUS1 family protein C16orf58 homolog isoform X1 |
XM_005164032.3 | XP_005164089.1 | RUS1 family protein C16orf58 homolog isoform X2 |
XM_005164031.3 | XP_005164088.1 | RUS1 family protein C16orf58 homolog isoform X2 |
XM_005164030.3 | XP_005164087.1 | RUS1 family protein C16orf58 homolog isoform X2 |
XM_005164032.4 | XP_005164089.1 | RUS1 family protein C16orf58 homolog isoform X1 |
NM_001110453.1 | NP_001103923.1 | RUS1 family protein C16orf58 homolog |
XM_005164033.3 | XP_005164090.2 | RUS1 family protein C16orf58 homolog isoform X1 |
XM_021470792.1 | XP_021326467.1 | RUS1 family protein C16orf58 homolog isoform X1 |
C20H16orf58 | XP_001113355.1 | |
Canis lupus familiaris (dog) | C6H16orf58 | XP_547054.4 |
Mus musculus (house mouse) | BC017158 | NP_663565.2 |
Drosophila melanogaster (fruit fly) | CG10338 | NP_609897.2 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP010020 | XP_319167.2 |
Arabidopsis thaliana (thale cress) | RUS3 | NP_172832.3 |
Bos taurus (cattle) | C25H16orf58 | NP_001070441.1 |
Xenopus tropicalis (tropical clawed frog) | LOC101732099 | XP_004918161.1 |
Rattus norvegicus (Norway rat) | RGD1310127 | NP_001030594.1 |
Homo sapiens (human) | C16orf58 | NP_073581.2 |
Pan troglodytes (chimpanzee) | C16H16orf58 | XP_001159530.1 |
Danio rerio (zebrafish) | zgc:162613 | NP_001103923.1 |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following zgc:162613 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the zgc:162613 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa35558 | |
Clone ID Related Accession (Same CDS sequence) | NM_001110453.1 | |
Accession Version | NM_001110453.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1299bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-30 | |
Organism | Danio rerio(zebrafish) | |
Product | RUS1 family protein C16orf58 homolog | |
Comment | Comment: PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from BC134046.1. On Nov 16, 2007 this sequence version replaced XM_678596.2. ##Evidence-Data-START## Transcript exon combination :: BC134046.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01765705, SAMN02259096 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGAGGAAA GTGAAGGAGT GATTGCTACT GAGCGGTATG GCTCACAGGA GTCCTGGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001103923.1 |
CDS | 62..1360 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001110453.1 |
1 | ATGGAGGAAA GTGAAGGAGT GATTGCTACT GAGCGGTATG GCTCACAGGA GTCCTGGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa08460 | |
Clone ID Related Accession (Same CDS sequence) | XM_005164030.4 , XM_005164031.4 , XM_005164032.3 , XM_005164031.3 , XM_005164030.3 , XM_005164032.4 , XM_021470792.1 | |
Accession Version | XM_005164030.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1308bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | RUS1 family protein C16orf58 homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007114.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005164030.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTCGAGA TGGAGGAAAG TGAAGGAGTG ATTGCTACTG AGCGGTATGG CTCACAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005164087.1 |
CDS | 124..1431 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005164030.4 |
1 | ATGGTCGAGA TGGAGGAAAG TGAAGGAGTG ATTGCTACTG AGCGGTATGG CTCACAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa08460 | |
Clone ID Related Accession (Same CDS sequence) | XM_005164030.4 , XM_005164031.4 , XM_005164032.3 , XM_005164031.3 , XM_005164030.3 , XM_005164032.4 , XM_021470792.1 | |
Accession Version | XM_005164031.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1308bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | RUS1 family protein C16orf58 homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007114.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005164031.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTCGAGA TGGAGGAAAG TGAAGGAGTG ATTGCTACTG AGCGGTATGG CTCACAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005164088.1 |
CDS | 23..1330 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005164031.4 |
1 | ATGGTCGAGA TGGAGGAAAG TGAAGGAGTG ATTGCTACTG AGCGGTATGG CTCACAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa08460 | |
Clone ID Related Accession (Same CDS sequence) | XM_005164030.4 , XM_005164031.4 , XM_005164032.3 , XM_005164031.3 , XM_005164030.3 , XM_005164032.4 , XM_021470792.1 | |
Accession Version | XM_005164032.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1308bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | RUS1 family protein C16orf58 homolog isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007114.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005164032.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTCGAGA TGGAGGAAAG TGAAGGAGTG ATTGCTACTG AGCGGTATGG CTCACAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005164089.1 |
CDS | 108..1415 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005164032.3 |
1 | ATGGTCGAGA TGGAGGAAAG TGAAGGAGTG ATTGCTACTG AGCGGTATGG CTCACAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa08460 | |
Clone ID Related Accession (Same CDS sequence) | XM_005164030.4 , XM_005164031.4 , XM_005164032.3 , XM_005164031.3 , XM_005164030.3 , XM_005164032.4 , XM_021470792.1 | |
Accession Version | XM_005164031.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1308bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | RUS1 family protein C16orf58 homolog isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007114.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005164031.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTCGAGA TGGAGGAAAG TGAAGGAGTG ATTGCTACTG AGCGGTATGG CTCACAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005164088.1 |
CDS | 41..1348 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005164031.3 |
1 | ATGGTCGAGA TGGAGGAAAG TGAAGGAGTG ATTGCTACTG AGCGGTATGG CTCACAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa08460 | |
Clone ID Related Accession (Same CDS sequence) | XM_005164030.4 , XM_005164031.4 , XM_005164032.3 , XM_005164031.3 , XM_005164030.3 , XM_005164032.4 , XM_021470792.1 | |
Accession Version | XM_005164030.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1308bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | RUS1 family protein C16orf58 homolog isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007114.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005164030.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTCGAGA TGGAGGAAAG TGAAGGAGTG ATTGCTACTG AGCGGTATGG CTCACAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005164087.1 |
CDS | 125..1432 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005164030.3 |
1 | ATGGTCGAGA TGGAGGAAAG TGAAGGAGTG ATTGCTACTG AGCGGTATGG CTCACAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa08460 | |
Clone ID Related Accession (Same CDS sequence) | XM_005164030.4 , XM_005164031.4 , XM_005164032.3 , XM_005164031.3 , XM_005164030.3 , XM_005164032.4 , XM_021470792.1 | |
Accession Version | XM_005164032.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1308bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | RUS1 family protein C16orf58 homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007114.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005164032.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTCGAGA TGGAGGAAAG TGAAGGAGTG ATTGCTACTG AGCGGTATGG CTCACAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005164089.1 |
CDS | 107..1414 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005164032.4 |
1 | ATGGTCGAGA TGGAGGAAAG TGAAGGAGTG ATTGCTACTG AGCGGTATGG CTCACAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa08460 | |
Clone ID Related Accession (Same CDS sequence) | XM_005164030.4 , XM_005164031.4 , XM_005164032.3 , XM_005164031.3 , XM_005164030.3 , XM_005164032.4 , XM_021470792.1 | |
Accession Version | XM_021470792.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1308bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | RUS1 family protein C16orf58 homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007114.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTCGAGA TGGAGGAAAG TGAAGGAGTG ATTGCTACTG AGCGGTATGG CTCACAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021326467.1 |
CDS | 70..1377 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021470792.1 |
1 | ATGGTCGAGA TGGAGGAAAG TGAAGGAGTG ATTGCTACTG AGCGGTATGG CTCACAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa42255 | |
Clone ID Related Accession (Same CDS sequence) | XM_005164033.3 | |
Accession Version | XM_005164033.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1332bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | RUS1 family protein C16orf58 homolog isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007114.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005164033.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTACATGC AGCCTGAGAC TACAATGGTC GAGATGGAGG AAAGTGAAGG AGTGATTGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005164090.2 |
CDS | 106..1437 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005164033.3 |
1 | ATGTACATGC AGCCTGAGAC TACAATGGTC GAGATGGAGG AAAGTGAAGG AGTGATTGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |