Gene Symbol |
SIRT3 |
Entrez Gene ID |
558775 |
Full Name |
sirtuin 3 |
Synonyms |
zgc:158774 |
General protein information |
- Preferred Names
sirtuin 3
Names
NAD-dependent protein deacetylase sirtuin-3, mitochondrial
|
Gene Type |
protein-coding |
Organism |
Danio rerio(Zebrafish) |
mRNA and Protein(s)
mRNA |
Protein |
Name |
XM_009303487.3 |
XP_009301762.1 |
NAD-dependent protein deacetylase sirtuin-3, mitochondrial isoform X1 |
XM_009303487.2 |
XP_009301762.1 |
NAD-dependent protein deacetylase sirtuin-3, mitochondrial isoform X1 |
NM_001080174.1 |
NP_001073643.1 |
NAD-dependent protein deacetylase sirtuin-3, mitochondrial |
XM_009303488.3 |
XP_009301763.1 |
NAD-dependent protein deacetylase sirtuin-3, mitochondrial isoform X2 |
XM_017356877.2 |
XP_017212366.1 |
NAD-dependent protein deacetylase sirtuin-3, mitochondrial isoform X3 |
XM_009303488.2 |
XP_009301763.1 |
NAD-dependent protein deacetylase sirtuin-3, mitochondrial isoform X2 |
XM_017356877.1 |
XP_017212366.1 |
NAD-dependent protein deacetylase sirtuin-3, mitochondrial isoform X3 |
Pan troglodytes (chimpanzee) |
SIRT3 |
XP_003312891.1 |
Mus musculus (house mouse) |
Sirt3 |
NP_001171275.1 |
Xenopus tropicalis (tropical clawed frog) |
sirt3 |
XP_002937698.2 |
Bos taurus (cattle) |
SIRT3 |
NP_001193598.1 |
Gallus gallus (chicken) |
SIRT3 |
NP_001186422.1 |
Danio rerio (zebrafish) |
sirt3 |
NP_001073643.1 |
Homo sapiens (human) |
SIRT3 |
NP_036371.1 |
|
SIRT3 |
XP_001116486.2 |
Canis lupus familiaris (dog) |
SIRT3 |
XP_855809.1 |
Rattus norvegicus (Norway rat) |
Sirt3 |
NP_001099783.1 |
Related articles in PubMed
Altered Adipogenesis in Zebrafish Larvae Following High Fat Diet and Chemical Exposure Is Visualised by Stimulated Raman Scattering Microscopy.
den Broeder MJ, Moester MJB, Kamstra JH, Cenijn PH, Davidoiu V, Kamminga LM, Ariese F, de Boer JF, Legler J
International journal of molecular sciences18(4)(2017 Apr)
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following SIRT3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SIRT3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
ODa02514 |
Clone ID Related Accession (Same CDS sequence) |
NM_001080174.1
|
Accession Version |
NM_001080174.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1074bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-08-02 |
Organism |
Danio rerio(zebrafish) |
Product |
NAD-dependent protein deacetylase sirtuin-3, mitochondrial |
Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC129442.1. On Mar 11, 2007 this sequence version replaced XM_679133.2.
##Evidence-Data-START##
Transcript exon combination :: BC129442.1 [ECO:0000332]
RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350]
##Evidence-Data-END##
##RefSeq-Attributes-START##
gene product(s) localized to mito. :: inferred from homology
##RefSeq-Attributes-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGCTGTACT TAAATACCTT TTTGCCAAGT GTTTGCAGAC GCTGTTTTGC AGAGAATCTC TTATGGAGAA GAGGATTGAC TACTACACAG AATCTGTCAA GAACAAAGCT CGTTCATCAA AAGACTCTGT CACATTTCCC TCATGCACAG AAGGGTGCTG CATTTCTTTC ACAGTTCATT TATTGCCCAG CTGCCTTCAT TAAATGTGGT GGAACAAGAG GCCTGTTTGG AGGAGGCCGT GACAATGTTC ACCAGCAAAC CCTTGAAGAC ATTGCAGAAA AAATCAGAGA ACGCAAGTTT AAACGAATTG TGGTGATGGC AGGGGCAGGC ATCAGCACAC CAAGTGGAAT CCCAGACTTC AGATCACCCG GCAGCGGCCT TTATGATAAC CTTCAACAGT ACAATCTACC CTATGCTGAA GCCATATTTG AAATAAATTA TTTCCATCAT AATCCTAACC CTTTTTTCGC TCTTGCCAAA GAGCTTTATC CTGGTAATTA CCAACCCAAC CTGACGCACT ACTTCATTCG CATGCTTCAC GATAAGGAAC AGCTGCTCAG GATGTACACG CAAAACATTG ATGGACTTGA GCGCATGGCT GGCATTCCTC CAAAGATGCT TGTGGAGGCA CATGGAACAT TTGCCACTGC CACATGCACA GTTTGTCGGA GGGATTACAA AGGAGAGGAA CTTCGGGATG ACATCATGGC AGGAACAGTA CCCAAATGCC CAACTTGTAA AGGAATCATC AAGCCTGACA TTGTGTTCTT TGGTGAGGAG CTTCCACAGC ACTTCTTCAC CTACCTTACA GACTTCCCAA TAGCAGACCT GCTCATTGTG ATGGGAACAT CTCTTGAGGT GGAGCCCTTT GCAAGTTTGG CTGGTGCTGT GCGTGGTTCT GTACCAAGGC TTTTGATAAA TCGAGACCTT GTGGGGCCGT TTGCCTCGGG GTCCCAACGT CACACTGACG TGGCTGAGCT GGGTGACGTG GTTAATGGGG TAAAAAAGCT GGTGGAGCTC CTGGGCTGGA AGCAGGAATT AGAAGACTTA ATGAATGTTG GCAGAGACAA GTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001073643.1 |
CDS | 67..1140 |
Translation | |
Target ORF information:
RefSeq Version | NM_001080174.1 |
Organism | Danio rerio(zebrafish) |
Definition | Danio rerio sirtuin 3 (sirt3), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001080174.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGCTGTACT TAAATACCTT TTTGCCAAGT GTTTGCAGAC GCTGTTTTGC AGAGAATCTC TTATGGAGAA GAGGATTGAC TACTACACAG AATCTGTCAA GAACAAAGCT CGTTCATCAA AAGACTCTGT CACATTTCCC TCATGCACAG AAGGGTGCTG CATTTCTTTC ACAGTTCATT TATTGCCCAG CTGCCTTCAT TAAATGTGGT GGAACAAGAG GCCTGTTTGG AGGAGGCCGT GACAATGTTC ACCAGCAAAC CCTTGAAGAC ATTGCAGAAA AAATCAGAGA ACGCAAGTTT AAACGAATTG TGGTGATGGC AGGGGCAGGC ATCAGCACAC CAAGTGGAAT CCCAGACTTC AGATCACCCG GCAGCGGCCT TTATGATAAC CTTCAACAGT ACAATCTACC CTATGCTGAA GCCATATTTG AAATAAATTA TTTCCATCAT AATCCTAACC CTTTTTTCGC TCTTGCCAAA GAGCTTTATC CTGGTAATTA CCAACCCAAC CTGACGCACT ACTTCATTCG CATGCTTCAC GATAAGGAAC AGCTGCTCAG GATGTACACG CAAAACATTG ATGGACTTGA GCGCATGGCT GGCATTCCTC CAAAGATGCT TGTGGAGGCA CATGGAACAT TTGCCACTGC CACATGCACA GTTTGTCGGA GGGATTACAA AGGAGAGGAA CTTCGGGATG ACATCATGGC AGGAACAGTA CCCAAATGCC CAACTTGTAA AGGAATCATC AAGCCTGACA TTGTGTTCTT TGGTGAGGAG CTTCCACAGC ACTTCTTCAC CTACCTTACA GACTTCCCAA TAGCAGACCT GCTCATTGTG ATGGGAACAT CTCTTGAGGT GGAGCCCTTT GCAAGTTTGG CTGGTGCTGT GCGTGGTTCT GTACCAAGGC TTTTGATAAA TCGAGACCTT GTGGGGCCGT TTGCCTCGGG GTCCCAACGT CACACTGACG TGGCTGAGCT GGGTGACGTG GTTAATGGGG TAAAAAAGCT GGTGGAGCTC CTGGGCTGGA AGCAGGAATT AGAAGACTTA ATGAATGTTG GCAGAGACAA GTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
ODa42910 |
Clone ID Related Accession (Same CDS sequence) |
XM_009303487.3
, XM_009303487.2
|
Accession Version |
XM_009303487.3 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1077bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2017-06-14 |
Organism |
Danio rerio(zebrafish) |
Product |
NAD-dependent protein deacetylase sirtuin-3, mitochondrial isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007118.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jun 15, 2017 this sequence version replaced XM_009303487.2.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Danio rerio Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.4
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGCTGTACT TAAATACCTT TTTGCCAAGT GTTTGCAGAC GCTGTTTTGC AGAGAATCTC TTATGGAGAA GAGGATTGAC TACTACACAG AATCTGTCAA GAACAAAGCT CGTTCATCAA AAGACTCTGT CACATTTCCC TCATGCACAG AAGGGTGCTG CATTTCTTTC ACAGTTCATT TATTGCCCAG CTGCCTTCAT TAAATGTGGT GGAACAAGAG GCCTGTTTGG AGGAGGCCGT GACAATGTTC ACCAGCAAAC CCTTGAAGAC ATTGCAGAAA AAATCAGAGA ACGCAAGTTT AAACGAATTG TGGTGATGGC AGGGGCAGGC ATCAGCACAC CAAGTGGAAT CCCAGACTTC AGATCACCCG GCAGCGGCCT TTATGATAAC CTTCAACAGT ACAATCTACC CTATGCTGAA GCCATATTTG AAATAAATTA TTTCCATCAT AATCCTAACC CTTTTTTCGC TCTTGCCAAA GAGCTTTATC CTGGTAATTA CCAACCCAAC CTGACGCACT ACTTCATTCG CATGCTTCAC GATAAGGAAC AGCTGCTCAG GATGTACACG CAAAACATTG ATGGACTTGA GCGCATGGCT GGCATTCCTC CAAAGATGCT TGTGGAGGCA CATGGAACAT TTGCCACTGC CACATGCACA GTTTGTCGGA GGGATTACAA AGGAGAGGAA CTTCGGGATG ACATCATGGC AGGAACAGTA CCCAAATGCC CAACTTGTAA AGGAATCATC AAGCCTGACA TTGTGTTCTT TGGTGAGGAG CTTCCACAGC ACTTCTTCAC CTACCTTACA GACTTCCCAA TAGCAGACCT GCTCATTGTG ATGGGAACAT CTCTTGAGGT GGAGCCCTTT GCAAGTTTGG CTGGTGCTGT GCGTGGTTCT GTACCAAGGC TTTTGATAAA TCGAGACCTT GTGGGGCCGT TTGCCTCGGG GTCCCAACGT CACACTGACG TGGCTGAGCT GGGTGACGTG GTTAATGGGG TAAAAAAGCT GGTGGAGCTC CTGGGCTGGA AGCAGGAATT AGAAGACTTA ATGAATGTTG GCAGAGACAA GGTCTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_009301762.1 |
CDS | 102..1178 |
Translation | |
Target ORF information:
RefSeq Version | XM_009303487.3 |
Organism | Danio rerio(zebrafish) |
Definition | Danio rerio sirtuin 3 (sirt3), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_009303487.3 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGCTGTACT TAAATACCTT TTTGCCAAGT GTTTGCAGAC GCTGTTTTGC AGAGAATCTC TTATGGAGAA GAGGATTGAC TACTACACAG AATCTGTCAA GAACAAAGCT CGTTCATCAA AAGACTCTGT CACATTTCCC TCATGCACAG AAGGGTGCTG CATTTCTTTC ACAGTTCATT TATTGCCCAG CTGCCTTCAT TAAATGTGGT GGAACAAGAG GCCTGTTTGG AGGAGGCCGT GACAATGTTC ACCAGCAAAC CCTTGAAGAC ATTGCAGAAA AAATCAGAGA ACGCAAGTTT AAACGAATTG TGGTGATGGC AGGGGCAGGC ATCAGCACAC CAAGTGGAAT CCCAGACTTC AGATCACCCG GCAGCGGCCT TTATGATAAC CTTCAACAGT ACAATCTACC CTATGCTGAA GCCATATTTG AAATAAATTA TTTCCATCAT AATCCTAACC CTTTTTTCGC TCTTGCCAAA GAGCTTTATC CTGGTAATTA CCAACCCAAC CTGACGCACT ACTTCATTCG CATGCTTCAC GATAAGGAAC AGCTGCTCAG GATGTACACG CAAAACATTG ATGGACTTGA GCGCATGGCT GGCATTCCTC CAAAGATGCT TGTGGAGGCA CATGGAACAT TTGCCACTGC CACATGCACA GTTTGTCGGA GGGATTACAA AGGAGAGGAA CTTCGGGATG ACATCATGGC AGGAACAGTA CCCAAATGCC CAACTTGTAA AGGAATCATC AAGCCTGACA TTGTGTTCTT TGGTGAGGAG CTTCCACAGC ACTTCTTCAC CTACCTTACA GACTTCCCAA TAGCAGACCT GCTCATTGTG ATGGGAACAT CTCTTGAGGT GGAGCCCTTT GCAAGTTTGG CTGGTGCTGT GCGTGGTTCT GTACCAAGGC TTTTGATAAA TCGAGACCTT GTGGGGCCGT TTGCCTCGGG GTCCCAACGT CACACTGACG TGGCTGAGCT GGGTGACGTG GTTAATGGGG TAAAAAAGCT GGTGGAGCTC CTGGGCTGGA AGCAGGAATT AGAAGACTTA ATGAATGTTG GCAGAGACAA GGTCTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
ODa42910 |
Clone ID Related Accession (Same CDS sequence) |
XM_009303487.3
, XM_009303487.2
|
Accession Version |
XM_009303487.2 |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1077bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-06-23 |
Organism |
Danio rerio(Zebrafish) |
Product |
NAD-dependent protein deacetylase sirtuin-3, mitochondrial isoform X1 |
Comment |
MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007118.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jun 24, 2016 this sequence version replaced XM_009303487.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Danio rerio Annotation Release 105
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGCTGTACT TAAATACCTT TTTGCCAAGT GTTTGCAGAC GCTGTTTTGC AGAGAATCTC TTATGGAGAA GAGGATTGAC TACTACACAG AATCTGTCAA GAACAAAGCT CGTTCATCAA AAGACTCTGT CACATTTCCC TCATGCACAG AAGGGTGCTG CATTTCTTTC ACAGTTCATT TATTGCCCAG CTGCCTTCAT TAAATGTGGT GGAACAAGAG GCCTGTTTGG AGGAGGCCGT GACAATGTTC ACCAGCAAAC CCTTGAAGAC ATTGCAGAAA AAATCAGAGA ACGCAAGTTT AAACGAATTG TGGTGATGGC AGGGGCAGGC ATCAGCACAC CAAGTGGAAT CCCAGACTTC AGATCACCCG GCAGCGGCCT TTATGATAAC CTTCAACAGT ACAATCTACC CTATGCTGAA GCCATATTTG AAATAAATTA TTTCCATCAT AATCCTAACC CTTTTTTCGC TCTTGCCAAA GAGCTTTATC CTGGTAATTA CCAACCCAAC CTGACGCACT ACTTCATTCG CATGCTTCAC GATAAGGAAC AGCTGCTCAG GATGTACACG CAAAACATTG ATGGACTTGA GCGCATGGCT GGCATTCCTC CAAAGATGCT TGTGGAGGCA CATGGAACAT TTGCCACTGC CACATGCACA GTTTGTCGGA GGGATTACAA AGGAGAGGAA CTTCGGGATG ACATCATGGC AGGAACAGTA CCCAAATGCC CAACTTGTAA AGGAATCATC AAGCCTGACA TTGTGTTCTT TGGTGAGGAG CTTCCACAGC ACTTCTTCAC CTACCTTACA GACTTCCCAA TAGCAGACCT GCTCATTGTG ATGGGAACAT CTCTTGAGGT GGAGCCCTTT GCAAGTTTGG CTGGTGCTGT GCGTGGTTCT GTACCAAGGC TTTTGATAAA TCGAGACCTT GTGGGGCCGT TTGCCTCGGG GTCCCAACGT CACACTGACG TGGCTGAGCT GGGTGACGTG GTTAATGGGG TAAAAAAGCT GGTGGAGCTC CTGGGCTGGA AGCAGGAATT AGAAGACTTA ATGAATGTTG GCAGAGACAA GGTCTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_009301762.1 |
CDS | 91..1167 |
Translation | |
Target ORF information:
RefSeq Version | XM_009303487.2 |
Organism | Danio rerio(Zebrafish) |
Definition | Danio rerio sirtuin 3 (sirt3), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_009303487.2 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGCTGTACT TAAATACCTT TTTGCCAAGT GTTTGCAGAC GCTGTTTTGC AGAGAATCTC TTATGGAGAA GAGGATTGAC TACTACACAG AATCTGTCAA GAACAAAGCT CGTTCATCAA AAGACTCTGT CACATTTCCC TCATGCACAG AAGGGTGCTG CATTTCTTTC ACAGTTCATT TATTGCCCAG CTGCCTTCAT TAAATGTGGT GGAACAAGAG GCCTGTTTGG AGGAGGCCGT GACAATGTTC ACCAGCAAAC CCTTGAAGAC ATTGCAGAAA AAATCAGAGA ACGCAAGTTT AAACGAATTG TGGTGATGGC AGGGGCAGGC ATCAGCACAC CAAGTGGAAT CCCAGACTTC AGATCACCCG GCAGCGGCCT TTATGATAAC CTTCAACAGT ACAATCTACC CTATGCTGAA GCCATATTTG AAATAAATTA TTTCCATCAT AATCCTAACC CTTTTTTCGC TCTTGCCAAA GAGCTTTATC CTGGTAATTA CCAACCCAAC CTGACGCACT ACTTCATTCG CATGCTTCAC GATAAGGAAC AGCTGCTCAG GATGTACACG CAAAACATTG ATGGACTTGA GCGCATGGCT GGCATTCCTC CAAAGATGCT TGTGGAGGCA CATGGAACAT TTGCCACTGC CACATGCACA GTTTGTCGGA GGGATTACAA AGGAGAGGAA CTTCGGGATG ACATCATGGC AGGAACAGTA CCCAAATGCC CAACTTGTAA AGGAATCATC AAGCCTGACA TTGTGTTCTT TGGTGAGGAG CTTCCACAGC ACTTCTTCAC CTACCTTACA GACTTCCCAA TAGCAGACCT GCTCATTGTG ATGGGAACAT CTCTTGAGGT GGAGCCCTTT GCAAGTTTGG CTGGTGCTGT GCGTGGTTCT GTACCAAGGC TTTTGATAAA TCGAGACCTT GTGGGGCCGT TTGCCTCGGG GTCCCAACGT CACACTGACG TGGCTGAGCT GGGTGACGTG GTTAATGGGG TAAAAAAGCT GGTGGAGCTC CTGGGCTGGA AGCAGGAATT AGAAGACTTA ATGAATGTTG GCAGAGACAA GGTCTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
ODa42911 |
Clone ID Related Accession (Same CDS sequence) |
XM_009303488.3
, XM_009303488.2
|
Accession Version |
XM_009303488.3 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 762bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2017-06-14 |
Organism |
Danio rerio(zebrafish) |
Product |
NAD-dependent protein deacetylase sirtuin-3, mitochondrial isoform X2 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007118.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jun 15, 2017 this sequence version replaced XM_009303488.2.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Danio rerio Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.4
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721
| ATGGCAGGGG CAGGCATCAG CACACCAAGT GGAATCCCAG ACTTCAGATC ACCCGGCAGC GGCCTTTATG ATAACCTTCA ACAGTACAAT CTACCCTATG CTGAAGCCAT ATTTGAAATA AATTATTTCC ATCATAATCC TAACCCTTTT TTCGCTCTTG CCAAAGAGCT TTATCCTGGT AATTACCAAC CCAACCTGAC GCACTACTTC ATTCGCATGC TTCACGATAA GGAACAGCTG CTCAGGATGT ACACGCAAAA CATTGATGGA CTTGAGCGCA TGGCTGGCAT TCCTCCAAAG ATGCTTGTGG AGGCACATGG AACATTTGCC ACTGCCACAT GCACAGTTTG TCGGAGGGAT TACAAAGGAG AGGAACTTCG GGATGACATC ATGGCAGGAA CAGTACCCAA ATGCCCAACT TGTAAAGGAA TCATCAAGCC TGACATTGTG TTCTTTGGTG AGGAGCTTCC ACAGCACTTC TTCACCTACC TTACAGACTT CCCAATAGCA GACCTGCTCA TTGTGATGGG AACATCTCTT GAGGTGGAGC CCTTTGCAAG TTTGGCTGGT GCTGTGCGTG GTTCTGTACC AAGGCTTTTG ATAAATCGAG ACCTTGTGGG GCCGTTTGCC TCGGGGTCCC AACGTCACAC TGACGTGGCT GAGCTGGGTG ACGTGGTTAA TGGGGTAAAA AAGCTGGTGG AGCTCCTGGG CTGGAAGCAG GAATTAGAAG ACTTAATGAA TGTTGGCAGA GACAAGGTCT GA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_009301763.1 |
CDS | 451..1212 |
Translation | |
Target ORF information:
RefSeq Version | XM_009303488.3 |
Organism | Danio rerio(zebrafish) |
Definition | Danio rerio sirtuin 3 (sirt3), transcript variant X2, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_009303488.3 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721
| ATGGCAGGGG CAGGCATCAG CACACCAAGT GGAATCCCAG ACTTCAGATC ACCCGGCAGC GGCCTTTATG ATAACCTTCA ACAGTACAAT CTACCCTATG CTGAAGCCAT ATTTGAAATA AATTATTTCC ATCATAATCC TAACCCTTTT TTCGCTCTTG CCAAAGAGCT TTATCCTGGT AATTACCAAC CCAACCTGAC GCACTACTTC ATTCGCATGC TTCACGATAA GGAACAGCTG CTCAGGATGT ACACGCAAAA CATTGATGGA CTTGAGCGCA TGGCTGGCAT TCCTCCAAAG ATGCTTGTGG AGGCACATGG AACATTTGCC ACTGCCACAT GCACAGTTTG TCGGAGGGAT TACAAAGGAG AGGAACTTCG GGATGACATC ATGGCAGGAA CAGTACCCAA ATGCCCAACT TGTAAAGGAA TCATCAAGCC TGACATTGTG TTCTTTGGTG AGGAGCTTCC ACAGCACTTC TTCACCTACC TTACAGACTT CCCAATAGCA GACCTGCTCA TTGTGATGGG AACATCTCTT GAGGTGGAGC CCTTTGCAAG TTTGGCTGGT GCTGTGCGTG GTTCTGTACC AAGGCTTTTG ATAAATCGAG ACCTTGTGGG GCCGTTTGCC TCGGGGTCCC AACGTCACAC TGACGTGGCT GAGCTGGGTG ACGTGGTTAA TGGGGTAAAA AAGCTGGTGG AGCTCCTGGG CTGGAAGCAG GAATTAGAAG ACTTAATGAA TGTTGGCAGA GACAAGGTCT GA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
ODa42911 |
Clone ID Related Accession (Same CDS sequence) |
XM_009303488.3
, XM_009303488.2
|
Accession Version |
XM_009303488.2 |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 762bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-06-23 |
Organism |
Danio rerio(Zebrafish) |
Product |
NAD-dependent protein deacetylase sirtuin-3, mitochondrial isoform X2 |
Comment |
MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007118.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jun 24, 2016 this sequence version replaced XM_009303488.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Danio rerio Annotation Release 105
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721
| ATGGCAGGGG CAGGCATCAG CACACCAAGT GGAATCCCAG ACTTCAGATC ACCCGGCAGC GGCCTTTATG ATAACCTTCA ACAGTACAAT CTACCCTATG CTGAAGCCAT ATTTGAAATA AATTATTTCC ATCATAATCC TAACCCTTTT TTCGCTCTTG CCAAAGAGCT TTATCCTGGT AATTACCAAC CCAACCTGAC GCACTACTTC ATTCGCATGC TTCACGATAA GGAACAGCTG CTCAGGATGT ACACGCAAAA CATTGATGGA CTTGAGCGCA TGGCTGGCAT TCCTCCAAAG ATGCTTGTGG AGGCACATGG AACATTTGCC ACTGCCACAT GCACAGTTTG TCGGAGGGAT TACAAAGGAG AGGAACTTCG GGATGACATC ATGGCAGGAA CAGTACCCAA ATGCCCAACT TGTAAAGGAA TCATCAAGCC TGACATTGTG TTCTTTGGTG AGGAGCTTCC ACAGCACTTC TTCACCTACC TTACAGACTT CCCAATAGCA GACCTGCTCA TTGTGATGGG AACATCTCTT GAGGTGGAGC CCTTTGCAAG TTTGGCTGGT GCTGTGCGTG GTTCTGTACC AAGGCTTTTG ATAAATCGAG ACCTTGTGGG GCCGTTTGCC TCGGGGTCCC AACGTCACAC TGACGTGGCT GAGCTGGGTG ACGTGGTTAA TGGGGTAAAA AAGCTGGTGG AGCTCCTGGG CTGGAAGCAG GAATTAGAAG ACTTAATGAA TGTTGGCAGA GACAAGGTCT GA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_009301763.1 |
CDS | 443..1204 |
Translation | |
Target ORF information:
RefSeq Version | XM_009303488.2 |
Organism | Danio rerio(Zebrafish) |
Definition | Danio rerio sirtuin 3 (sirt3), transcript variant X2, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_009303488.2 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721
| ATGGCAGGGG CAGGCATCAG CACACCAAGT GGAATCCCAG ACTTCAGATC ACCCGGCAGC GGCCTTTATG ATAACCTTCA ACAGTACAAT CTACCCTATG CTGAAGCCAT ATTTGAAATA AATTATTTCC ATCATAATCC TAACCCTTTT TTCGCTCTTG CCAAAGAGCT TTATCCTGGT AATTACCAAC CCAACCTGAC GCACTACTTC ATTCGCATGC TTCACGATAA GGAACAGCTG CTCAGGATGT ACACGCAAAA CATTGATGGA CTTGAGCGCA TGGCTGGCAT TCCTCCAAAG ATGCTTGTGG AGGCACATGG AACATTTGCC ACTGCCACAT GCACAGTTTG TCGGAGGGAT TACAAAGGAG AGGAACTTCG GGATGACATC ATGGCAGGAA CAGTACCCAA ATGCCCAACT TGTAAAGGAA TCATCAAGCC TGACATTGTG TTCTTTGGTG AGGAGCTTCC ACAGCACTTC TTCACCTACC TTACAGACTT CCCAATAGCA GACCTGCTCA TTGTGATGGG AACATCTCTT GAGGTGGAGC CCTTTGCAAG TTTGGCTGGT GCTGTGCGTG GTTCTGTACC AAGGCTTTTG ATAAATCGAG ACCTTGTGGG GCCGTTTGCC TCGGGGTCCC AACGTCACAC TGACGTGGCT GAGCTGGGTG ACGTGGTTAA TGGGGTAAAA AAGCTGGTGG AGCTCCTGGG CTGGAAGCAG GAATTAGAAG ACTTAATGAA TGTTGGCAGA GACAAGGTCT GA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
ODa59637 |
Clone ID Related Accession (Same CDS sequence) |
XM_017356877.2
, XM_017356877.1
|
Accession Version |
XM_017356877.2 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 615bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2017-06-14 |
Organism |
Danio rerio(zebrafish) |
Product |
NAD-dependent protein deacetylase sirtuin-3, mitochondrial isoform X3 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007118.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jun 15, 2017 this sequence version replaced XM_017356877.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Danio rerio Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.4
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601
| ATGCTGTACT TAAATACCTT TTTGCCAAGT GTTTGCAGAC GCTGTTTTGC AGAGAATCTC TTATGGAGAA GAGGATTGAC TACTACACAG AATCTGTCAA GAACAAAGCT CGTTCATCAA AAGACTCTGT CACATTTCCC TCATGCACAG AAGGGTGCTG CATTTCTTTC ACAGTTCATT TATTGCCCAG CTGCCTTCAT TAAATGTGGT GGAACAAGAG GCCTGTTTGG AGGAGGCCGT GACAATGTTC ACCAGCAAAC CCTTGAAGAC ATTGCAGAAA AAATCAGAGA ACGCAAGTTT AAACGAATTG TGGTGATGGC AGGGGCAGGC ATCAGCACAC CAAGTGGAAT CCCAGACTTC AGATCACCCG GCAGCGGCCT TTATGATAAC CTTCAACAGT ACAATCTACC CTATGCTGAA GCCATATTTG AAATAAATTA TTTCCATCAT AATCCTAACC CTTTTTTCGC TCTTGCCAAA GAGCTTTATC CTGGTAATTA CCAACCCAAC CTGACGCACT ACTTCATTCG CATGCTTCAC GATAAGGAAC AGCTGCTCAG GATGTACACG CAAAACATTG ATGGACTTGA GCGCAGAGCC ACGTGCACAC ACTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_017212366.1 |
CDS | 102..716 |
Translation | |
Target ORF information:
RefSeq Version | XM_017356877.2 |
Organism | Danio rerio(zebrafish) |
Definition | Danio rerio sirtuin 3 (sirt3), transcript variant X3, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_017356877.2 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601
| ATGCTGTACT TAAATACCTT TTTGCCAAGT GTTTGCAGAC GCTGTTTTGC AGAGAATCTC TTATGGAGAA GAGGATTGAC TACTACACAG AATCTGTCAA GAACAAAGCT CGTTCATCAA AAGACTCTGT CACATTTCCC TCATGCACAG AAGGGTGCTG CATTTCTTTC ACAGTTCATT TATTGCCCAG CTGCCTTCAT TAAATGTGGT GGAACAAGAG GCCTGTTTGG AGGAGGCCGT GACAATGTTC ACCAGCAAAC CCTTGAAGAC ATTGCAGAAA AAATCAGAGA ACGCAAGTTT AAACGAATTG TGGTGATGGC AGGGGCAGGC ATCAGCACAC CAAGTGGAAT CCCAGACTTC AGATCACCCG GCAGCGGCCT TTATGATAAC CTTCAACAGT ACAATCTACC CTATGCTGAA GCCATATTTG AAATAAATTA TTTCCATCAT AATCCTAACC CTTTTTTCGC TCTTGCCAAA GAGCTTTATC CTGGTAATTA CCAACCCAAC CTGACGCACT ACTTCATTCG CATGCTTCAC GATAAGGAAC AGCTGCTCAG GATGTACACG CAAAACATTG ATGGACTTGA GCGCAGAGCC ACGTGCACAC ACTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
ODa59637 |
Clone ID Related Accession (Same CDS sequence) |
XM_017356877.2
, XM_017356877.1
|
Accession Version |
XM_017356877.1 |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 615bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-06-23 |
Organism |
Danio rerio(Zebrafish) |
Product |
NAD-dependent protein deacetylase sirtuin-3, mitochondrial isoform X3 |
Comment |
MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007118.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Danio rerio Annotation Release 105
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601
| ATGCTGTACT TAAATACCTT TTTGCCAAGT GTTTGCAGAC GCTGTTTTGC AGAGAATCTC TTATGGAGAA GAGGATTGAC TACTACACAG AATCTGTCAA GAACAAAGCT CGTTCATCAA AAGACTCTGT CACATTTCCC TCATGCACAG AAGGGTGCTG CATTTCTTTC ACAGTTCATT TATTGCCCAG CTGCCTTCAT TAAATGTGGT GGAACAAGAG GCCTGTTTGG AGGAGGCCGT GACAATGTTC ACCAGCAAAC CCTTGAAGAC ATTGCAGAAA AAATCAGAGA ACGCAAGTTT AAACGAATTG TGGTGATGGC AGGGGCAGGC ATCAGCACAC CAAGTGGAAT CCCAGACTTC AGATCACCCG GCAGCGGCCT TTATGATAAC CTTCAACAGT ACAATCTACC CTATGCTGAA GCCATATTTG AAATAAATTA TTTCCATCAT AATCCTAACC CTTTTTTCGC TCTTGCCAAA GAGCTTTATC CTGGTAATTA CCAACCCAAC CTGACGCACT ACTTCATTCG CATGCTTCAC GATAAGGAAC AGCTGCTCAG GATGTACACG CAAAACATTG ATGGACTTGA GCGCAGAGCC ACGTGCACAC ACTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_017212366.1 |
CDS | 91..705 |
Translation | |
Target ORF information:
RefSeq Version | XM_017356877.1 |
Organism | Danio rerio(Zebrafish) |
Definition | Danio rerio sirtuin 3 (sirt3), transcript variant X3, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_017356877.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601
| ATGCTGTACT TAAATACCTT TTTGCCAAGT GTTTGCAGAC GCTGTTTTGC AGAGAATCTC TTATGGAGAA GAGGATTGAC TACTACACAG AATCTGTCAA GAACAAAGCT CGTTCATCAA AAGACTCTGT CACATTTCCC TCATGCACAG AAGGGTGCTG CATTTCTTTC ACAGTTCATT TATTGCCCAG CTGCCTTCAT TAAATGTGGT GGAACAAGAG GCCTGTTTGG AGGAGGCCGT GACAATGTTC ACCAGCAAAC CCTTGAAGAC ATTGCAGAAA AAATCAGAGA ACGCAAGTTT AAACGAATTG TGGTGATGGC AGGGGCAGGC ATCAGCACAC CAAGTGGAAT CCCAGACTTC AGATCACCCG GCAGCGGCCT TTATGATAAC CTTCAACAGT ACAATCTACC CTATGCTGAA GCCATATTTG AAATAAATTA TTTCCATCAT AATCCTAACC CTTTTTTCGC TCTTGCCAAA GAGCTTTATC CTGGTAATTA CCAACCCAAC CTGACGCACT ACTTCATTCG CATGCTTCAC GATAAGGAAC AGCTGCTCAG GATGTACACG CAAAACATTG ATGGACTTGA GCGCAGAGCC ACGTGCACAC ACTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J |
 |
RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R |