Gene Symbol | colec12 |
Entrez Gene ID | 558942 |
Full Name | collectin sub-family member 12 |
Synonyms | hm:zeh0853,id:ibd2826,sb:cb377,si:ch211-212m21.5 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » colec12 cDNA ORF clone
gRNAs
Gene Symbol | colec12 |
Entrez Gene ID | 558942 |
Full Name | collectin sub-family member 12 |
Synonyms | hm:zeh0853,id:ibd2826,sb:cb377,si:ch211-212m21.5 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_005163457.3 | XP_005163514.1 | collectin-12 isoform X1 |
XM_005163457.4 | XP_005163514.1 | collectin-12 isoform X1 |
NM_001122840.1 | NP_001116312.1 | collectin-12 |
Canis lupus familiaris (dog) | COLEC12 | XP_005623081.1 |
Bos taurus (cattle) | COLEC12 | NP_001095313.1 |
Pan troglodytes (chimpanzee) | COLEC12 | XP_524004.3 |
COLEC12 | XP_001088438.2 | |
Rattus norvegicus (Norway rat) | Colec12 | NP_001020892.1 |
Gallus gallus (chicken) | COLEC12 | NP_001034688.1 |
Danio rerio (zebrafish) | colec12 | NP_001116312.1 |
Xenopus tropicalis (tropical clawed frog) | colec12 | XP_002934169.1 |
Mus musculus (house mouse) | Colec12 | NP_569716.2 |
Homo sapiens (human) | COLEC12 | NP_569057.1 |
RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)
Molecular cloning and functional analysis of scavenger receptor zebrafish CL-P1.
Fukuda M, Ohtani K, Jang SJ, Yoshizaki T, Mori K, Motomura W, Yoshida I, Suzuki Y, Kohgo Y, Wakamiya N
Biochimica et biophysica acta1810(12)1150-9(2011 Dec)
A gene expression screen in zebrafish embryogenesis.
Kudoh T, Tsang M, Hukriede NA, Chen X, Dedekian M, Clarke CJ, Kiang A, Schultz S, Epstein JA, Toyama R, Dawid IB
Genome research11(12)1979-87(2001 Dec)
Identification, characterization, and mapping of expressed sequence tags from an embryonic zebrafish heart cDNA library.
Ton C, Hwang DM, Dempsey AA, Tang HC, Yoon J, Lim M, Mably JD, Fishman MC, Liew CC
Genome research10(12)1915-27(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following colec12 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the colec12 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa00047 | |
Clone ID Related Accession (Same CDS sequence) | NM_001122840.1 | |
Accession Version | NM_001122840.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2163bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-22 | |
Organism | Danio rerio(zebrafish) | |
Product | collectin-12 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BX927088.11. On Mar 28, 2008 this sequence version replaced XR_029670.1. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGAAGGACG ACTTCAATGA TGAAGAAGAA GTGCAGTCAT TTGGCTACAA AAGGTTTGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001116312.1 |
CDS | 443..2605 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAAGGACG ACTTCAATGA TGAAGAAGAA GTGCAGTCAT TTGGCTACAA AAGGTTTGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa07112 | |
Clone ID Related Accession (Same CDS sequence) | XM_005163457.3 , XM_005163457.4 | |
Accession Version | XM_005163457.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2223bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | collectin-12 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007113.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005163457.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGGACG ACTTCAATGA TGAAGAAGAA GTGCAGTCAT TTGGCTACAA AAGGTTTGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005163514.1 |
CDS | 477..2699 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAAGGACG ACTTCAATGA TGAAGAAGAA GTGCAGTCAT TTGGCTACAA AAGGTTTGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa07112 | |
Clone ID Related Accession (Same CDS sequence) | XM_005163457.3 , XM_005163457.4 | |
Accession Version | XM_005163457.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2223bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | collectin-12 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007113.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005163457.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGGACG ACTTCAATGA TGAAGAAGAA GTGCAGTCAT TTGGCTACAA AAGGTTTGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005163514.1 |
CDS | 473..2695 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAAGGACG ACTTCAATGA TGAAGAAGAA GTGCAGTCAT TTGGCTACAA AAGGTTTGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RFX transcription factors are essential for hearing in mice. |
Molecular cloning and functional analysis of scavenger receptor zebrafish CL-P1. |
A gene expression screen in zebrafish embryogenesis. |
Identification, characterization, and mapping of expressed sequence tags from an embryonic zebrafish heart cDNA library. |