Gene Symbol | slc4a11 |
Entrez Gene ID | 559346 |
Full Name | solute carrier family 4, sodium borate transporter, member 11 |
Synonyms | si:dkey-12j14.4 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » slc4a11 cDNA ORF clone
Gene Symbol | slc4a11 |
Entrez Gene ID | 559346 |
Full Name | solute carrier family 4, sodium borate transporter, member 11 |
Synonyms | si:dkey-12j14.4 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_017358753.1 | XP_017214242.1 | sodium bicarbonate transporter-like protein 11 isoform X4 |
XM_005156556.4 | XP_005156613.1 | sodium bicarbonate transporter-like protein 11 isoform X1 |
XM_005156556.3 | XP_005156613.1 | sodium bicarbonate transporter-like protein 11 isoform X1 |
XM_017358751.1 | XP_017214240.1 | sodium bicarbonate transporter-like protein 11 isoform X2 |
XM_017358752.1 | XP_017214241.1 | sodium bicarbonate transporter-like protein 11 isoform X3 |
NM_001159828.1 | NP_001153300.1 | sodium bicarbonate transporter-like protein 11 |
Homo sapiens (human) | SLC4A11 | NP_001167561.1 |
Canis lupus familiaris (dog) | SLC4A11 | XP_005634909.1 |
Mus musculus (house mouse) | Slc4a11 | NP_001074631.1 |
SLC4A11 | XP_002798266.1 | |
Gallus gallus (chicken) | SLC4A11 | XP_004936342.1 |
Caenorhabditis elegans (roundworm) | abts-3 | NP_001033333.1 |
Pan troglodytes (chimpanzee) | SLC4A11 | XP_001160838.1 |
Danio rerio (zebrafish) | slc4a11 | NP_001153300.1 |
Rattus norvegicus (Norway rat) | Slc4a11 | NP_001101245.1 |
Bos taurus (cattle) | SLC4A11 | NP_001178243.1 |
Xenopus tropicalis (tropical clawed frog) | slc4a11 | XP_002936409.2 |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
Identifying an uptake mechanism for the antiepileptic and bipolar disorder treatment valproic acid using the simple biomedical model Dictyostelium.
Terbach N, Shah R, Kelemen R, Klein PS, Gordienko D, Brown NA, Wilkinson CJ, Williams RS
Journal of cell science124(Pt 13)2267-76(2011 Jul)
Anion exchanger 1b, but not sodium-bicarbonate cotransporter 1b, plays a role in transport functions of zebrafish H+-ATPase-rich cells.
Lee YC, Yan JJ, Cruz SA, Horng JL, Hwang PP
American journal of physiology. Cell physiology300(2)C295-307(2011 Feb)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following slc4a11 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the slc4a11 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa33354 | |
Clone ID Related Accession (Same CDS sequence) | NM_001159828.1 | |
Accession Version | NM_001159828.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2541bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-07 | |
Organism | Danio rerio(zebrafish) | |
Product | sodium bicarbonate transporter-like protein 11 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CR788322.32, CT025874.7 and CR388098.7. On May 8, 2009 this sequence version replaced XM_001921042.1. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMN01765705, SAMN02951648 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGATGGAAG CAAACAAAGT TCTTCATTTT GTGCCATCCG AGGCTCCCTC CTCGGGGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001153300.1 |
CDS | 1..2541 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001159828.1 |
1 | ATGATGGAAG CAAACAAAGT TCTTCATTTT GTGCCATCCG AGGCTCCCTC CTCGGGGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa18509 | |
Clone ID Related Accession (Same CDS sequence) | XM_005156556.4 , XM_005156556.3 | |
Accession Version | XM_005156556.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2634bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | sodium bicarbonate transporter-like protein 11 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007124.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005156556.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGGAAG CAAACAAAGT TCTTCATTTT GTGCCATCCG AGGCTCCCTC CTCGGGGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005156613.1 |
CDS | 125..2758 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005156556.4 |
1 | ATGATGGAAG CAAACAAAGT TCTTCATTTT GTGCCATCCG AGGCTCCCTC CTCGGGGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa18509 | |
Clone ID Related Accession (Same CDS sequence) | XM_005156556.4 , XM_005156556.3 | |
Accession Version | XM_005156556.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2634bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | sodium bicarbonate transporter-like protein 11 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007124.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005156556.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGGAAG CAAACAAAGT TCTTCATTTT GTGCCATCCG AGGCTCCCTC CTCGGGGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005156613.1 |
CDS | 113..2746 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005156556.3 |
1 | ATGATGGAAG CAAACAAAGT TCTTCATTTT GTGCCATCCG AGGCTCCCTC CTCGGGGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa54706 | |
Clone ID Related Accession (Same CDS sequence) | XM_017358751.1 | |
Accession Version | XM_017358751.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2601bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | sodium bicarbonate transporter-like protein 11 isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007124.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGGAAG CAAACAAAGT TCTTCATTTT GTGCCATCCG AGGCTCCCTC CTCGGGGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017214240.1 |
CDS | 113..2713 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017358751.1 |
1 | ATGATGGAAG CAAACAAAGT TCTTCATTTT GTGCCATCCG AGGCTCCCTC CTCGGGGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa54707 | |
Clone ID Related Accession (Same CDS sequence) | XM_017358752.1 | |
Accession Version | XM_017358752.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2574bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | sodium bicarbonate transporter-like protein 11 isoform X3 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007124.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGGAAG CAAACAAAGT TCTTCATTTT GTGCCATCCG AGGCTCCCTC CTCGGGGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017214241.1 |
CDS | 113..2686 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017358752.1 |
1 | ATGATGGAAG CAAACAAAGT TCTTCATTTT GTGCCATCCG AGGCTCCCTC CTCGGGGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa54708 | |
Clone ID Related Accession (Same CDS sequence) | XM_017358753.1 | |
Accession Version | XM_017358753.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2541bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | sodium bicarbonate transporter-like protein 11 isoform X4 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007124.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGGAAG CAAACAAAGT TCTTCATTTT GTGCCATCCG AGGCTCCCTC CTCGGGGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017214242.1 |
CDS | 113..2653 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017358753.1 |
1 | ATGATGGAAG CAAACAAAGT TCTTCATTTT GTGCCATCCG AGGCTCCCTC CTCGGGGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
Identifying an uptake mechanism for the antiepileptic and bipolar disorder treatment valproic acid using the simple biomedical model Dictyostelium. |
Anion exchanger 1b, but not sodium-bicarbonate cotransporter 1b, plays a role in transport functions of zebrafish H+-ATPase-rich cells. |