ORF cDNA Clones and Custom Clones » Species Summary » Danio rerio » prune cDNA ORF clone

prune cDNA ORF clone, Danio rerio(zebrafish)

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Summary

Gene Symbol	prune
Entrez Gene ID	563343
Full Name	prune exopolyphosphatase
General protein information	Preferred Names prune exopolyphosphatase Names exopolyphosphatase PRUNE1
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001160294.1	NP_001153766.1	exopolyphosphatase PRUNE1

Homologies

Homo sapiens (human)	PRUNE	NP_067045.1
Canis lupus familiaris (dog)	PRUNE	XP_540307.3
Mus musculus (house mouse)	Prune	NP_775482.1
Gallus gallus (chicken)	PRUNE	XP_004948377.1
Kluyveromyces lactis	KLLA0B03806g	XP_451703.1
Eremothecium gossypii	AGOS_ABL083W	NP_982864.1
Magnaporthe oryzae (rice blast fungus)	MGG_08801	XP_003719170.1
Neurospora crassa	NCU06310	XP_962572.1
	LOC708898	XP_002808286.1
Rattus norvegicus (Norway rat)	Prune	NP_001007698.1
Danio rerio (zebrafish)	LOC563343	NP_001153766.1
Saccharomyces cerevisiae (baker's yeast)	PPX1	NP_012071.1
Bos taurus (cattle)	PRUNE	NP_001030429.1
Gallus gallus (chicken)	LOC100857290	XP_004948402.1
Drosophila melanogaster (fruit fly)	pn	NP_476684.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP004314	XP_313586.5
Schizosaccharomyces pombe (fission yeast)	SPAC2F3.11	NP_594390.1
Xenopus tropicalis (tropical clawed frog)	prune	XP_002937310.1

Bibliography

Related articles in PubMed

Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.
Gaudet P, Livstone MS, Lewis SE, Thomas PD
Briefings in bioinformatics12(5)449-62(2011 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

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The following prune gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the prune cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

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***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa34506	NM_001160294.1 Latest version!	Danio rerio prune exopolyphosphatase (prune), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

prune ( NM_001160294.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001153766.1 Danio rerio prune exopolyphosphatase (prune), mRNA.

Price & Availability↑

CloneID	ODa34506
Clone ID Related Accession (Same CDS sequence)	NM_001160294.1
Accession Version	NM_001160294.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1344bp) Protein sequence SNP
Vector	pcDNA3.1⁺/C-(K)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-01-26
Organism	Danio rerio(zebrafish)
Product	exopolyphosphatase PRUNE1
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BX005412.17. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: GFIL01023623.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476740, SAMEA4476748 [ECO:0000348] ##Evidence-Data-END##

ATGGAGGCGT ATTTACGGAG CTGTCGTGAT GTGCTGAAGA GTTGTAGTAG GAACAGCCCA 
GGGCTGCATG TCGTAATGGG AAATGAGGCT TGTGATATGG ACTCCATGGT ATCAGCCCTG 
ACCTTCGCCT ACTTTCTTTC AAAGAGTCTT GATTGTAAGA GGATACCTGT GCCTGTGCTC 
AATATTCCAC GCGCTGAGTT CCCTTTGCGG TCAGACAGCA TCTTTCTGCT GAGAGAAAGC 
GGTCTGTCGC AGGACTACCT GCTGTTCAGG GATGAGGTGG ATCTCCATGG CCTGCACAAG 
AACAAACAGC TGACATTGAC ACTGGTCGAC CACAATGTCC TGCCCAGTGC TGACAGTGAG 
CTTGAGGACG CTGTTGTGGA AGTGATTGAC CATCATCTCC TACAGAGACC CTCCTCCTCC 
TGCCCCATCA CTGTGGAGCC TGTGGGCTCC TGCACAACCC TGGTGACTGA GCGCATTGCC 
CAGAAGTCAC CCGCAGTGCT CGACCAACAA GTGGCTCAGC TTTTATACGG TACCATCATC 
CTGGACTGTG TTAACATGGC ACCTGAAGCA GGTAAAGTCA CCCCGAAGGA CAGCCAGTAC 
GCCATCTTTT TGGAGCAGCG TTTCCCAAAA CTGCCTCCGC GGGGCGCTCT GTTTCAGTCT 
CTGCAGAATG CCAAGTTTGA CGTGTCAGGC CTGTCCACAG AGCAGATGCT GCTGAAAGAC 
ATGAAAGCAG CGTCTGGTGG CGATCTGAGA TTGGCTGTCA GTGTTATTTA CATGACACTA 
GAGGATTTTC TTCAGAGAAG TGGCCTACAG CAGGACCTTT GCGAGTTCTG CCACAGTCAC 
AACTATAATC TGCTGCTGGC CATGACAATC TCTTTTAAAG ACAGCAAGGA GCCCTTCAGA 
CAGCTGGCCG TCTACAGCTC CAGCACCGTC TACAGGGAAG AGATGAGTAA AGCACTAGAA 
AAAGCCAAAA ACCCCAGTCT GGAGCTTAAG CCATTAAGCA GTCCATATCC AGATGTGAAG 
GCCTTTATTC AGGGTAACAC ACTGGCGTCT CGCAAAAAGG TGATGCCTAT AATCACAGAC 
TTCCTAAAGG AGAAGGAAAG GAGAGAAGCT CAGTGTATGA ACATGGAGGA TCTGGACCTG 
GACGATGATT CAAACCAGGA CCAGAGTGAC TGTCTGGAGG ACGCTGGGAT TGAGGACGAC 
ACTCGGGTTC CTCCAACGCC AATGAACAGT CTGGTGGAGG GCTGTCCCTT AGACAACGGC 
CTTCCCAAAA TCAGCCCTGA AGCCTTGGTG GAGAAAGTCA GCAAGATGGC AAGCATGGAG 
GACACATCTC CTGAGGAGCA GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001153766.1
CDS	132..1475
Translation	MEAYLRSCRDVLKSCSRNSPGLHVVMGNEACDMDSMVSALTFAYFLSKSLDCKRIPVPVLNIPRAEFPLRSDSIFLLRESGLSQDYLLFRDEVDLHGLHKNKQLTLTLVDHNVLPSADSELEDAVVEVIDHHLLQRPSSSCPITVEPVGSCTTLVTERIAQKSPAVLDQQVAQLLYGTIILDCVNMAPEAGKVTPKDSQYAIFLEQRFPKLPPRGALFQSLQNAKFDVSGLSTEQMLLKDMKAASGGDLRLAVSVIYMTLEDFLQRSGLQQDLCEFCHSHNYNLLLAMTISFKDSKEPFRQLAVYSSSTVYREEMSKALEKAKNPSLELKPLSSPYPDVKAFIQGNTLASRKKVMPIITDFLKEKERREAQCMNMEDLDLDDDSNQDQSDCLEDAGIEDDTRVPPTPMNSLVEGCPLDNGLPKISPEALVEKVSKMASMEDTSPEEQ

Target ORF information:

RefSeq Version	NM_001160294.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio prune exopolyphosphatase (prune), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001160294.1

ORF Insert Sequence:

ATGGAGGCGT ATTTACGGAG CTGTCGTGAT GTGCTGAAGA GTTGTAGTAG GAACAGCCCA 
GGGCTGCATG TCGTAATGGG AAATGAGGCT TGTGATATGG ACTCCATGGT ATCAGCCCTG 
ACCTTCGCCT ACTTTCTTTC AAAGAGTCTT GATTGTAAGA GGATACCTGT GCCTGTGCTC 
AATATTCCAC GCGCTGAGTT CCCTTTGCGG TCAGACAGCA TCTTTCTGCT GAGAGAAAGC 
GGTCTGTCGC AGGACTACCT GCTGTTCAGG GATGAGGTGG ATCTCCATGG CCTGCACAAG 
AACAAACAGC TGACATTGAC ACTGGTCGAC CACAATGTCC TGCCCAGTGC TGACAGTGAG 
CTTGAGGACG CTGTTGTGGA AGTGATTGAC CATCATCTCC TACAGAGACC CTCCTCCTCC 
TGCCCCATCA CTGTGGAGCC TGTGGGCTCC TGCACAACCC TGGTGACTGA GCGCATTGCC 
CAGAAGTCAC CCGCAGTGCT CGACCAACAA GTGGCTCAGC TTTTATACGG TACCATCATC 
CTGGACTGTG TTAACATGGC ACCTGAAGCA GGTAAAGTCA CCCCGAAGGA CAGCCAGTAC 
GCCATCTTTT TGGAGCAGCG TTTCCCAAAA CTGCCTCCGC GGGGCGCTCT GTTTCAGTCT 
CTGCAGAATG CCAAGTTTGA CGTGTCAGGC CTGTCCACAG AGCAGATGCT GCTGAAAGAC 
ATGAAAGCAG CGTCTGGTGG CGATCTGAGA TTGGCTGTCA GTGTTATTTA CATGACACTA 
GAGGATTTTC TTCAGAGAAG TGGCCTACAG CAGGACCTTT GCGAGTTCTG CCACAGTCAC 
AACTATAATC TGCTGCTGGC CATGACAATC TCTTTTAAAG ACAGCAAGGA GCCCTTCAGA 
CAGCTGGCCG TCTACAGCTC CAGCACCGTC TACAGGGAAG AGATGAGTAA AGCACTAGAA 
AAAGCCAAAA ACCCCAGTCT GGAGCTTAAG CCATTAAGCA GTCCATATCC AGATGTGAAG 
GCCTTTATTC AGGGTAACAC ACTGGCGTCT CGCAAAAAGG TGATGCCTAT AATCACAGAC 
TTCCTAAAGG AGAAGGAAAG GAGAGAAGCT CAGTGTATGA ACATGGAGGA TCTGGACCTG 
GACGATGATT CAAACCAGGA CCAGAGTGAC TGTCTGGAGG ACGCTGGGAT TGAGGACGAC 
ACTCGGGTTC CTCCAACGCC AATGAACAGT CTGGTGGAGG GCTGTCCCTT AGACAACGGC 
CTTCCCAAAA TCAGCCCTGA AGCCTTGGTG GAGAAAGTCA GCAAGATGGC AAGCATGGAG 
GACACATCTC CTGAGGAGCA GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Evolution of complexity in the zebrafish synapse proteome.
Nature communications814613(2017 Mar)
Bay?s ?,Collins MO,Reig-Viader R,Gou G,Goulding D,Izquierdo A,Choudhary JS,Emes RD,Grant SG

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.
Briefings in bioinformatics12(5)449-62(2011 Sep)
Gaudet P,Livstone MS,Lewis SE,Thomas PD

Collapse all
Expand all

prune cDNA ORF clone, Danio rerio(zebrafish)

Summary

Reference Sequences (RefSeq)

Pathways from BioSystems

Homologies

Gene Ontology

Bibliography

Reference Sequences (Refseq)

Target ORF information:

Target ORF information:

ORF Insert Sequence:

PubMed

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