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XYLT2 cDNA ORF clone, Danio rerio(Zebrafish)

Summary

Gene Symbol XYLT2
Entrez Gene ID 563446
Full Name xylosyltransferase II
Synonyms zgc:194562
General protein information
Preferred Names

xylosyltransferase II

Names

xylosyltransferase 2
Gene Type protein-coding
Organism Danio rerio(Zebrafish)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_009299859.3 XP_009298134.1 xylosyltransferase 2 isoform X1
NM_001130778.1 NP_001124250.1 xylosyltransferase 2
XM_009299859.2 XP_009298134.1 xylosyltransferase 2 isoform X1

Pathways from BioSystems


Homologies


Mus musculus (house mouse) Xylt2 NP_665827.2
Pan troglodytes (chimpanzee) XYLT2 NP_001009086.1
Bos taurus (cattle) XYLT2 NP_001008667.1
Xenopus tropicalis (tropical clawed frog) xylt2 NP_001006733.1
Rattus norvegicus (Norway rat) Xylt2 NP_071632.2
Gallus gallus (chicken) XYLT2 NP_001001785.1
XYLT2 XP_001093519.1
Homo sapiens (human) XYLT2 NP_071450.2
Canis lupus familiaris (dog) XYLT2 NP_001008714.1
Danio rerio (zebrafish) zgc:194562 NP_001124250.1

Gene Ontology


Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

Zebrafish Collagen Type I: Molecular and Biochemical Characterization of the Major Structural Protein in Bone and Skin.
Gistelinck C, Gioia R, Gagliardi A, Tonelli F, Marchese L, Bianchi L, Landi C, Bini L, Huysseune A, Witten PE, Staes A, Gevaert K, De Rocker N, Menten B, Malfait F, Leikin S, Carra S, Tenni R, Rossi A, De Paepe A, Coucke P, Willaert A, Forlino A
Scientific reports621540(2016 Feb)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following XYLT2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the XYLT2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa33497 NM_001130778.1
Latest version!		 Danio rerio xylosyltransferase II (xylt2), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 12-14 $510.30
$729.00
ODa44087 XM_009299859.3
Latest version!		 Danio rerio xylosyltransferase II (xylt2), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 12-14 $510.30
$729.00
View Old Accession Versions >>
ODa44087 XM_009299859.2 Danio rerio xylosyltransferase II (xylt2), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 12-14 $510.30
$729.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID ODa33497
Clone ID Related Accession (Same CDS sequence) NM_001130778.1
Accession Version NM_001130778.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 2604bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2017-08-05
Organism Danio rerio(zebrafish)
Product xylosyltransferase 2
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC163258.1. On Aug 6, 2008 this sequence version replaced XM_686807.3. ##Evidence-Data-START## Transcript exon combination :: BC163258.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA4476796 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
ATGGTCGCGA GCACCCGTGT ACAGAAGCTC CTCAGACGGT ATAAACTCGT GATCGCGGCC 
GGTTTAACGA TCTTGCTGGT CCAGGGGCTG GTGGTATGGA GCCTGCGGAG TCTTGAGGAG 
GGAGAGGCCG AGCGAAAGCA CAGACGCTCA AAGTTGCCCG ACCACAATGG CCAGGAGCAG 
AATCTGGACC CTGCTATCTT TGATTCTGGG GCAAACCACG GTCAATGGAG GCTGCGCCAG 
GACCAACCCG CGGTCACCGC TATCATCAGG AGAGGGTCCA GACGGAGAAA CAAGCCCCCT 
TTGAAGGACA AGAGTTTTGG CGGGCCTGAA GATGGAGTGG CGGTCGAAAA AGTCGCCCAT 
TATGATCCGT CAAGCAGCCG TAACTTCAGC GAGACGCGGG CAGGGGAAAC GGCCAAAATC 
CATCTGGTGG CACCGGGAGA GCCTGGCAGC GTTGAAGGTG CCCCACAGGT CCCGAGCAGT 
GACTTTGTGC CCAAATGTGA GATCTCGGGC AAGGATGCCC TGTCTGCCCT CCACCGTGCG 
GGTTCACGGC AGTGCAGACA GGAGATTGCC AACATCGTGT GCCAACACCA AGCAGGACAG 
CTCATGCCTC AGTCTCTGCC TCAGTTTTGC CCACAGCATG TGATCTCCAG CGCCGTCCAG 
CATGTGGATT TTGCTGATGC TGACCTCTCT AAGGTGGAGA ACCCAGTCAG GGTTGTTTTT 
GTGCTGGTGG TTCACGGACG AGCAGTTCGA CAGTTGAAGC GTCTCCTGAA AGCTATATAT 
CACAAGGACC ACTTTTATTA CATCCACGTC GACAAGCGCT CCAACTACAT GCATCGGGAG 
GTGTTGAAGA TGGCGGAGCT CTACCCCAAT GTGAGAGCCA CACCCTGGCG CATGGTGACC 
ATCTGGGGTG GAGCCAGTCT GCTGAAGGCT TACCTGCGCA GCATGCATGA TCTGCTGTCC 
ATGCTGGACT GGAAGTGGGA CTTCTTTATC AACCTCAGTG CCACCGACTT CCCCACAAGG 
ACCAACGATG AGCTGGTGGC TTTTCTCTCC CAGAACCGTG ACAAGAACTT CCTCAAGTCT 
CACGGCAGAG AGAACGCGAG GTTCATTAAG AAGCAAGGTC TGGACCGCCT GTTTCACGAG 
TGTGACAACC ACATGTGGCG TCTGGGTGAG CGCACCATCC CCGAGGGACT GGAGGTGTCA 
GGAGGCTCGG ACTGGTTTTC TCTCACACGG AAATTTGTGG AGTATGTGGT GAACTCGCAG 
GATGAGCTGG TGACAGGACT CAAGCAGTTC TACACCTACG CCCTTCTGCC TGCTGAGTCG 
TTCTTTCACA CAGTGTTGGG AAACAGCCAC ATGTGTGATA CTCTGGTGGA CAATAATCTC 
CGCGTGACCA ACTGGAACCG GAAGCTGGGC TGCAAGTGTC AGTATAAGCA TATAGTGGAC 
TGGTGCGGCT GTTCACCAAA TGACTTCAAA CCCTCAGACC TCATCAGAAT ACAGCAACTA 
ACTCGGCCTA CATTCTTCGC CCGTAAGTTC GAGTCTACAG TGAACCAGGA GGCTATCGAG 
ATCCTGGACA ATCATCTGTA TGGGCAGTAC CCTCCTGGCA CAGTGGCACT GAAAGCATAC 
TGGGAAAGCC TGTTTGAGCA GGCAGATGGG GTCTCGTCCC TCAATGATGT GGCCCTCACA 
GCGTACTCCT CCTTTTTTAG ACTGGGCCTC CATAGGCAAG AGACCTCTCA AAGCAGTTCT 
GAGGCCTGCA GATTTGAACC CATTGGTTAC CCCATGTCAG TGCACCTGTA TTTTTACGAT 
GACCGTTTCC AAGGATACCT GGTCAGGCAG GAGGTGCAGA ATATGGTCAC CAGGTCCCGT 
GAGATGCTGG AGGTGTGGGC TGTTCCTCAA GCAACCCTGC AGCTGGAACA CAACCTTCAT 
GAGTTTGAGC GCCTCAAACA CCTCGAGGTT GGAACCGAAT GGGACCCCAA GGAGCGAATC 
TTCCGCAACT TTGGTGGTGT GATGGGACCT CTAGACGAGC CGGTGGCCGT TCAGAAGTGG 
GCCCGTGGAC CCAACCTGAC AGCCACTATA GTGTGGATTG ACCCAGCGCA CATAGTAGCA 
GCGTCCTACG ACATCAGCAT AGATGTTGAG GCAGAATACA CGCAATACAA GCCCCCCCTT 
CAGCGCCCCC TCAGGCCTGG ATTGTGGACG GTGCGGGTGC TGCGGTTGTG GGAGCGTGTA 
GCAGAAGCAC GATTTCTGGT CATGCCTCTA GCCTTCAAGG GACGTGAGCC GTTGCGCACA 
GAAGACCACG GCTGGGTGCA CGCAGGTCCT CCGGGTAATG TTTACCTAGA ACAAAGCTTC 
CAGCAGCTCG CCCATGTGTT AAAGCTGCCT CCAAGTGAGC CGGCCCTGCA GGAGGCACAG 
AAGAAGACCT CGCTGGTGGG GAAACCACTG GAGGCTTGGG TCGACAGCTC CGTGGGCGCT 
TTCTGGGTCA CTGGAGATAC TTGCTCCGAG CGCACCTCCT CCTGTCCCAC TATAGGACTC 
TGCTCCAAAA CCTCCTGGAG CTCCTTGTCT CCTGACCCCA AATCAGAACT GGCACCTGTC 
AAAGCTAACG GTCGCATTAG GTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001124250.1
CDS26..2629
Translation

Target ORF information:

RefSeq Version NM_001130778.1
Organism Danio rerio(zebrafish)
Definition Danio rerio xylosyltransferase II (xylt2), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001130778.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
ATGGTCGCGA GCACCCGTGT ACAGAAGCTC CTCAGACGGT ATAAACTCGT GATCGCGGCC 
GGTTTAACGA TCTTGCTGGT CCAGGGGCTG GTGGTATGGA GCCTGCGGAG TCTTGAGGAG 
GGAGAGGCCG AGCGAAAGCA CAGACGCTCA AAGTTGCCCG ACCACAATGG CCAGGAGCAG 
AATCTGGACC CTGCTATCTT TGATTCTGGG GCAAACCACG GTCAATGGAG GCTGCGCCAG 
GACCAACCCG CGGTCACCGC TATCATCAGG AGAGGGTCCA GACGGAGAAA CAAGCCCCCT 
TTGAAGGACA AGAGTTTTGG CGGGCCTGAA GATGGAGTGG CGGTCGAAAA AGTCGCCCAT 
TATGATCCGT CAAGCAGCCG TAACTTCAGC GAGACGCGGG CAGGGGAAAC GGCCAAAATC 
CATCTGGTGG CACCGGGAGA GCCTGGCAGC GTTGAAGGTG CCCCACAGGT CCCGAGCAGT 
GACTTTGTGC CCAAATGTGA GATCTCGGGC AAGGATGCCC TGTCTGCCCT CCACCGTGCG 
GGTTCACGGC AGTGCAGACA GGAGATTGCC AACATCGTGT GCCAACACCA AGCAGGACAG 
CTCATGCCTC AGTCTCTGCC TCAGTTTTGC CCACAGCATG TGATCTCCAG CGCCGTCCAG 
CATGTGGATT TTGCTGATGC TGACCTCTCT AAGGTGGAGA ACCCAGTCAG GGTTGTTTTT 
GTGCTGGTGG TTCACGGACG AGCAGTTCGA CAGTTGAAGC GTCTCCTGAA AGCTATATAT 
CACAAGGACC ACTTTTATTA CATCCACGTC GACAAGCGCT CCAACTACAT GCATCGGGAG 
GTGTTGAAGA TGGCGGAGCT CTACCCCAAT GTGAGAGCCA CACCCTGGCG CATGGTGACC 
ATCTGGGGTG GAGCCAGTCT GCTGAAGGCT TACCTGCGCA GCATGCATGA TCTGCTGTCC 
ATGCTGGACT GGAAGTGGGA CTTCTTTATC AACCTCAGTG CCACCGACTT CCCCACAAGG 
ACCAACGATG AGCTGGTGGC TTTTCTCTCC CAGAACCGTG ACAAGAACTT CCTCAAGTCT 
CACGGCAGAG AGAACGCGAG GTTCATTAAG AAGCAAGGTC TGGACCGCCT GTTTCACGAG 
TGTGACAACC ACATGTGGCG TCTGGGTGAG CGCACCATCC CCGAGGGACT GGAGGTGTCA 
GGAGGCTCGG ACTGGTTTTC TCTCACACGG AAATTTGTGG AGTATGTGGT GAACTCGCAG 
GATGAGCTGG TGACAGGACT CAAGCAGTTC TACACCTACG CCCTTCTGCC TGCTGAGTCG 
TTCTTTCACA CAGTGTTGGG AAACAGCCAC ATGTGTGATA CTCTGGTGGA CAATAATCTC 
CGCGTGACCA ACTGGAACCG GAAGCTGGGC TGCAAGTGTC AGTATAAGCA TATAGTGGAC 
TGGTGCGGCT GTTCACCAAA TGACTTCAAA CCCTCAGACC TCATCAGAAT ACAGCAACTA 
ACTCGGCCTA CATTCTTCGC CCGTAAGTTC GAGTCTACAG TGAACCAGGA GGCTATCGAG 
ATCCTGGACA ATCATCTGTA TGGGCAGTAC CCTCCTGGCA CAGTGGCACT GAAAGCATAC 
TGGGAAAGCC TGTTTGAGCA GGCAGATGGG GTCTCGTCCC TCAATGATGT GGCCCTCACA 
GCGTACTCCT CCTTTTTTAG ACTGGGCCTC CATAGGCAAG AGACCTCTCA AAGCAGTTCT 
GAGGCCTGCA GATTTGAACC CATTGGTTAC CCCATGTCAG TGCACCTGTA TTTTTACGAT 
GACCGTTTCC AAGGATACCT GGTCAGGCAG GAGGTGCAGA ATATGGTCAC CAGGTCCCGT 
GAGATGCTGG AGGTGTGGGC TGTTCCTCAA GCAACCCTGC AGCTGGAACA CAACCTTCAT 
GAGTTTGAGC GCCTCAAACA CCTCGAGGTT GGAACCGAAT GGGACCCCAA GGAGCGAATC 
TTCCGCAACT TTGGTGGTGT GATGGGACCT CTAGACGAGC CGGTGGCCGT TCAGAAGTGG 
GCCCGTGGAC CCAACCTGAC AGCCACTATA GTGTGGATTG ACCCAGCGCA CATAGTAGCA 
GCGTCCTACG ACATCAGCAT AGATGTTGAG GCAGAATACA CGCAATACAA GCCCCCCCTT 
CAGCGCCCCC TCAGGCCTGG ATTGTGGACG GTGCGGGTGC TGCGGTTGTG GGAGCGTGTA 
GCAGAAGCAC GATTTCTGGT CATGCCTCTA GCCTTCAAGG GACGTGAGCC GTTGCGCACA 
GAAGACCACG GCTGGGTGCA CGCAGGTCCT CCGGGTAATG TTTACCTAGA ACAAAGCTTC 
CAGCAGCTCG CCCATGTGTT AAAGCTGCCT CCAAGTGAGC CGGCCCTGCA GGAGGCACAG 
AAGAAGACCT CGCTGGTGGG GAAACCACTG GAGGCTTGGG TCGACAGCTC CGTGGGCGCT 
TTCTGGGTCA CTGGAGATAC TTGCTCCGAG CGCACCTCCT CCTGTCCCAC TATAGGACTC 
TGCTCCAAAA CCTCCTGGAG CTCCTTGTCT CCTGACCCCA AATCAGAACT GGCACCTGTC 
AAAGCTAACG GTCGCATTAG GTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ODa44087
Clone ID Related Accession (Same CDS sequence) XM_009299859.3 , XM_009299859.2
Accession Version XM_009299859.3 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 2625bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2017-06-14
Organism Danio rerio(zebrafish)
Product xylosyltransferase 2 isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007114.7) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_009299859.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
ATGCGAATGA TTCACGGGGG AAAGATGGTC GCGAGCACCC GTGTACAGAA GCTCCTCAGA 
CGGTATAAAC TCGTGATCGC GGCCGGTTTA ACGATCTTGC TGGTCCAGGG GCTGGTGGTA 
TGGAGCCTGC GGAGTCTTGA GGAGGGAGAG GCCGAGCGAA AGCACAGACG CTCAAAGTTG 
CCCGACCACA ATGGCCAGGA GCAGAATCTG GACCCTGCTA TCTTTGATTC TGGGGCAAAC 
CACGGTCAAT GGAGGCTGCG CCAGGACCAA CCCGCGGTCA CCGCTATCAT CAGGAGAGGG 
TCCAGACGGA GAAACAAGCC CCCTTTGAAG GACAAGAGTT TTGGCGGGCC TGAAGATGGA 
GTGGCGGTCG AAAAAGTCGC CCATTATGAT CCGTCAAGCA GCCGTAACTT CAGCGAGACG 
CGGGCAGGGG AAACGGCCAA AATCCATCTG GTGGCACCGG GAGAGCCTGG CAGCGTTGAA 
GGTGCCCCAC AGGTCCCGAG CAGTGACTTT GTGCCCAAAT GTGAGATCTC GGGCAAGGAT 
GCCCTGTCTG CCCTCCACCG CGCGGGTTCA CGGCAGTGCA GACAGGAGAT TGCCAACATC 
GTGTGCCAAC ACCAAGCAGG ACAGCTCATG CCTCAGTCTC TGCCTCAGTT TTGCCCACAG 
CATGTGATCT CCAGCGCCGT CCAGCATGTG GATTTTGCTG ATGCTGACCT CTCTAAGGTG 
GAGAACCCAG TCAGGGTTGT TTTTGTGCTG GTGGTTCACG GACGAGCAGT TCGACAGTTG 
AAGCGTCTCC TGAAAGCTAT ATATCACAAG GACCACTTTT ATTACATCCA CGTCGACAAG 
CGCTCCAACT ACATGCATCG GGAGGTGTTG AAGATGGCGG AGCTCTACCC CAATGTGAGA 
GCCACACCCT GGCGCATGGT GACCATCTGG GGTGGAGCCA GTCTGCTGAA GGCCTACCTG 
CGCAGCATGC ATGATCTGCT GTCCATGCTG GACTGGAAGT GGGACTTCTT TATCAACCTC 
AGTGCCACTG ACTTCCCCAC AAGGACCAAC GATGAGCTGG TGGCTTTTCT CTCCCAGAAC 
CGTGACAAGA ACTTCCTCAA GTCTCACGGC AGAGAGAACG CGAGGTTCAT TAAGAAGCAA 
GGTCTGGACC GCCTGTTTCA CGAGTGTGAC AACCACATGT GGCGTCTGGG TGAGCGCACC 
ATCCCCGAGG GACTGGAGGT GTCAGGAGGC TCGGACTGGT TTTCTCTCAC ACGGAAATTT 
GTGGAGTATG TGGTGAACTC GCAGGATGAG CTGGTGACAG GACTCAAGCA GTTCTACACC 
TACGCCCTTC TGCCTGCTGA GTCTTTCTTT CACACAGTGT TGGGAAACAG CCACATGTGT 
GATACTCTGG TGGACAATAA TCTCCGCGTG ACCAATTGGA ACCGGAAGTT GGGCTGCAAG 
TGTCAGTATA AGCATATAGT GGACTGGTGC GGCTGTTCAC CAAATGACTT CAAACCCTCA 
GACCTCATCA GAATACAGCA ACTAACTCGG CCTACATTCT TCGCCCGTAA GTTCGAGTCT 
ACAGTGAACC AGGAGGCTAT CGAGATCCTG GACAATCATC TGTATGGGCA GTACCCTCCT 
GGCACAGTGG CACTGAAAGC ATACTGGGAA AGCCTGTTTG AGCAGGCAGA TGGGGTCTCG 
TCCCTCAATG ATGTGGCCCT CACAGCGTAC TCCTCCTTTT TTAGACTGGG CCTCCGTAGG 
CAAGAGACCT CTCAAAGCAG TTCTGAGGCC TGCAGATTTG AACCCATTGG TTACCCCGTC 
TCAGTGCACC TGTATTTTTA TGATGACCGT TTCCAAGGAT ACCTGGTCAG GCAGGAGGTG 
CAGAATATGG TGACCAGGTC CCGTGAGATG CTGGAGGTGT GGGCTGTTCC TCAAGCAACC 
CTGCAGCTGG AACACAACCT TCATGAGTTT GAGCGCCTCA AACACCTCGA GGTTGGAACC 
GAATGGGACC CCAAGGAGCG AATCTTCCGC AACTTTGGTG GTGTGATGGG ACCTCTAGAC 
GAGCCGGTGG CCGTTCAGAA GTGGGCCCGT GGACCCAACC TGACGGCCAC TATAGTGTGG 
ATTGACCCAG CGCACATAGT AGCAGCGTCC TACGACATCA GCATAGATGT TGAGGCAGAA 
TACACGCAAT ACAAGCCCCC CCTTCAGCGC CCCCTCAGGC CTGGATTGTG GACGGTGCGG 
GTGCTGCGGT TGTGGGAGCG TGTAGCAGAA GCACGATTTC TGGTCATGCC TCTAGCCTTC 
AAGGGACGTG AGCCGTTGCG CACAGACCAC GGCTGGGTGC ACGCAGGTCC TCCGGGTAAC 
GTTTACCTAG AGCAAAGCTT CCAGCAGCTC GCCCATGTGT TAAAGCTGCC TCCAAGTGAG 
CCGGCCCTGC AGGAGGCACA GAAGAAGACC TCGCTGGTGG GGAAACCACT GGAGGCTTGG 
GTCGACAGCT CCGTGGGCGC TTTCTGGGTC ACTGGAGATA CTTGCTCCGA GCGCACCTCC 
TCCTGTCCCA CTATAGGACT CTGCTCCAAA ACCTCCTGGA GCTCCTTGTC TCCTGACCCC 
AAATCAGAAC TGGCACCTGT CAAAGCTAAC GGTCGCATTA GGTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_009298134.1
CDS83..2707
Translation

Target ORF information:

RefSeq Version XM_009299859.3
Organism Danio rerio(zebrafish)
Definition Danio rerio xylosyltransferase II (xylt2), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_009299859.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
ATGCGAATGA TTCACGGGGG AAAGATGGTC GCGAGCACCC GTGTACAGAA GCTCCTCAGA 
CGGTATAAAC TCGTGATCGC GGCCGGTTTA ACGATCTTGC TGGTCCAGGG GCTGGTGGTA 
TGGAGCCTGC GGAGTCTTGA GGAGGGAGAG GCCGAGCGAA AGCACAGACG CTCAAAGTTG 
CCCGACCACA ATGGCCAGGA GCAGAATCTG GACCCTGCTA TCTTTGATTC TGGGGCAAAC 
CACGGTCAAT GGAGGCTGCG CCAGGACCAA CCCGCGGTCA CCGCTATCAT CAGGAGAGGG 
TCCAGACGGA GAAACAAGCC CCCTTTGAAG GACAAGAGTT TTGGCGGGCC TGAAGATGGA 
GTGGCGGTCG AAAAAGTCGC CCATTATGAT CCGTCAAGCA GCCGTAACTT CAGCGAGACG 
CGGGCAGGGG AAACGGCCAA AATCCATCTG GTGGCACCGG GAGAGCCTGG CAGCGTTGAA 
GGTGCCCCAC AGGTCCCGAG CAGTGACTTT GTGCCCAAAT GTGAGATCTC GGGCAAGGAT 
GCCCTGTCTG CCCTCCACCG CGCGGGTTCA CGGCAGTGCA GACAGGAGAT TGCCAACATC 
GTGTGCCAAC ACCAAGCAGG ACAGCTCATG CCTCAGTCTC TGCCTCAGTT TTGCCCACAG 
CATGTGATCT CCAGCGCCGT CCAGCATGTG GATTTTGCTG ATGCTGACCT CTCTAAGGTG 
GAGAACCCAG TCAGGGTTGT TTTTGTGCTG GTGGTTCACG GACGAGCAGT TCGACAGTTG 
AAGCGTCTCC TGAAAGCTAT ATATCACAAG GACCACTTTT ATTACATCCA CGTCGACAAG 
CGCTCCAACT ACATGCATCG GGAGGTGTTG AAGATGGCGG AGCTCTACCC CAATGTGAGA 
GCCACACCCT GGCGCATGGT GACCATCTGG GGTGGAGCCA GTCTGCTGAA GGCCTACCTG 
CGCAGCATGC ATGATCTGCT GTCCATGCTG GACTGGAAGT GGGACTTCTT TATCAACCTC 
AGTGCCACTG ACTTCCCCAC AAGGACCAAC GATGAGCTGG TGGCTTTTCT CTCCCAGAAC 
CGTGACAAGA ACTTCCTCAA GTCTCACGGC AGAGAGAACG CGAGGTTCAT TAAGAAGCAA 
GGTCTGGACC GCCTGTTTCA CGAGTGTGAC AACCACATGT GGCGTCTGGG TGAGCGCACC 
ATCCCCGAGG GACTGGAGGT GTCAGGAGGC TCGGACTGGT TTTCTCTCAC ACGGAAATTT 
GTGGAGTATG TGGTGAACTC GCAGGATGAG CTGGTGACAG GACTCAAGCA GTTCTACACC 
TACGCCCTTC TGCCTGCTGA GTCTTTCTTT CACACAGTGT TGGGAAACAG CCACATGTGT 
GATACTCTGG TGGACAATAA TCTCCGCGTG ACCAATTGGA ACCGGAAGTT GGGCTGCAAG 
TGTCAGTATA AGCATATAGT GGACTGGTGC GGCTGTTCAC CAAATGACTT CAAACCCTCA 
GACCTCATCA GAATACAGCA ACTAACTCGG CCTACATTCT TCGCCCGTAA GTTCGAGTCT 
ACAGTGAACC AGGAGGCTAT CGAGATCCTG GACAATCATC TGTATGGGCA GTACCCTCCT 
GGCACAGTGG CACTGAAAGC ATACTGGGAA AGCCTGTTTG AGCAGGCAGA TGGGGTCTCG 
TCCCTCAATG ATGTGGCCCT CACAGCGTAC TCCTCCTTTT TTAGACTGGG CCTCCGTAGG 
CAAGAGACCT CTCAAAGCAG TTCTGAGGCC TGCAGATTTG AACCCATTGG TTACCCCGTC 
TCAGTGCACC TGTATTTTTA TGATGACCGT TTCCAAGGAT ACCTGGTCAG GCAGGAGGTG 
CAGAATATGG TGACCAGGTC CCGTGAGATG CTGGAGGTGT GGGCTGTTCC TCAAGCAACC 
CTGCAGCTGG AACACAACCT TCATGAGTTT GAGCGCCTCA AACACCTCGA GGTTGGAACC 
GAATGGGACC CCAAGGAGCG AATCTTCCGC AACTTTGGTG GTGTGATGGG ACCTCTAGAC 
GAGCCGGTGG CCGTTCAGAA GTGGGCCCGT GGACCCAACC TGACGGCCAC TATAGTGTGG 
ATTGACCCAG CGCACATAGT AGCAGCGTCC TACGACATCA GCATAGATGT TGAGGCAGAA 
TACACGCAAT ACAAGCCCCC CCTTCAGCGC CCCCTCAGGC CTGGATTGTG GACGGTGCGG 
GTGCTGCGGT TGTGGGAGCG TGTAGCAGAA GCACGATTTC TGGTCATGCC TCTAGCCTTC 
AAGGGACGTG AGCCGTTGCG CACAGACCAC GGCTGGGTGC ACGCAGGTCC TCCGGGTAAC 
GTTTACCTAG AGCAAAGCTT CCAGCAGCTC GCCCATGTGT TAAAGCTGCC TCCAAGTGAG 
CCGGCCCTGC AGGAGGCACA GAAGAAGACC TCGCTGGTGG GGAAACCACT GGAGGCTTGG 
GTCGACAGCT CCGTGGGCGC TTTCTGGGTC ACTGGAGATA CTTGCTCCGA GCGCACCTCC 
TCCTGTCCCA CTATAGGACT CTGCTCCAAA ACCTCCTGGA GCTCCTTGTC TCCTGACCCC 
AAATCAGAAC TGGCACCTGT CAAAGCTAAC GGTCGCATTA GGTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ODa44087
Clone ID Related Accession (Same CDS sequence) XM_009299859.3 , XM_009299859.2
Accession Version XM_009299859.2 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 2625bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-06-23
Organism Danio rerio(Zebrafish)
Product xylosyltransferase 2 isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007114.6) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009299859.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
ATGCGAATGA TTCACGGGGG AAAGATGGTC GCGAGCACCC GTGTACAGAA GCTCCTCAGA 
CGGTATAAAC TCGTGATCGC GGCCGGTTTA ACGATCTTGC TGGTCCAGGG GCTGGTGGTA 
TGGAGCCTGC GGAGTCTTGA GGAGGGAGAG GCCGAGCGAA AGCACAGACG CTCAAAGTTG 
CCCGACCACA ATGGCCAGGA GCAGAATCTG GACCCTGCTA TCTTTGATTC TGGGGCAAAC 
CACGGTCAAT GGAGGCTGCG CCAGGACCAA CCCGCGGTCA CCGCTATCAT CAGGAGAGGG 
TCCAGACGGA GAAACAAGCC CCCTTTGAAG GACAAGAGTT TTGGCGGGCC TGAAGATGGA 
GTGGCGGTCG AAAAAGTCGC CCATTATGAT CCGTCAAGCA GCCGTAACTT CAGCGAGACG 
CGGGCAGGGG AAACGGCCAA AATCCATCTG GTGGCACCGG GAGAGCCTGG CAGCGTTGAA 
GGTGCCCCAC AGGTCCCGAG CAGTGACTTT GTGCCCAAAT GTGAGATCTC GGGCAAGGAT 
GCCCTGTCTG CCCTCCACCG CGCGGGTTCA CGGCAGTGCA GACAGGAGAT TGCCAACATC 
GTGTGCCAAC ACCAAGCAGG ACAGCTCATG CCTCAGTCTC TGCCTCAGTT TTGCCCACAG 
CATGTGATCT CCAGCGCCGT CCAGCATGTG GATTTTGCTG ATGCTGACCT CTCTAAGGTG 
GAGAACCCAG TCAGGGTTGT TTTTGTGCTG GTGGTTCACG GACGAGCAGT TCGACAGTTG 
AAGCGTCTCC TGAAAGCTAT ATATCACAAG GACCACTTTT ATTACATCCA CGTCGACAAG 
CGCTCCAACT ACATGCATCG GGAGGTGTTG AAGATGGCGG AGCTCTACCC CAATGTGAGA 
GCCACACCCT GGCGCATGGT GACCATCTGG GGTGGAGCCA GTCTGCTGAA GGCCTACCTG 
CGCAGCATGC ATGATCTGCT GTCCATGCTG GACTGGAAGT GGGACTTCTT TATCAACCTC 
AGTGCCACTG ACTTCCCCAC AAGGACCAAC GATGAGCTGG TGGCTTTTCT CTCCCAGAAC 
CGTGACAAGA ACTTCCTCAA GTCTCACGGC AGAGAGAACG CGAGGTTCAT TAAGAAGCAA 
GGTCTGGACC GCCTGTTTCA CGAGTGTGAC AACCACATGT GGCGTCTGGG TGAGCGCACC 
ATCCCCGAGG GACTGGAGGT GTCAGGAGGC TCGGACTGGT TTTCTCTCAC ACGGAAATTT 
GTGGAGTATG TGGTGAACTC GCAGGATGAG CTGGTGACAG GACTCAAGCA GTTCTACACC 
TACGCCCTTC TGCCTGCTGA GTCTTTCTTT CACACAGTGT TGGGAAACAG CCACATGTGT 
GATACTCTGG TGGACAATAA TCTCCGCGTG ACCAATTGGA ACCGGAAGTT GGGCTGCAAG 
TGTCAGTATA AGCATATAGT GGACTGGTGC GGCTGTTCAC CAAATGACTT CAAACCCTCA 
GACCTCATCA GAATACAGCA ACTAACTCGG CCTACATTCT TCGCCCGTAA GTTCGAGTCT 
ACAGTGAACC AGGAGGCTAT CGAGATCCTG GACAATCATC TGTATGGGCA GTACCCTCCT 
GGCACAGTGG CACTGAAAGC ATACTGGGAA AGCCTGTTTG AGCAGGCAGA TGGGGTCTCG 
TCCCTCAATG ATGTGGCCCT CACAGCGTAC TCCTCCTTTT TTAGACTGGG CCTCCGTAGG 
CAAGAGACCT CTCAAAGCAG TTCTGAGGCC TGCAGATTTG AACCCATTGG TTACCCCGTC 
TCAGTGCACC TGTATTTTTA TGATGACCGT TTCCAAGGAT ACCTGGTCAG GCAGGAGGTG 
CAGAATATGG TGACCAGGTC CCGTGAGATG CTGGAGGTGT GGGCTGTTCC TCAAGCAACC 
CTGCAGCTGG AACACAACCT TCATGAGTTT GAGCGCCTCA AACACCTCGA GGTTGGAACC 
GAATGGGACC CCAAGGAGCG AATCTTCCGC AACTTTGGTG GTGTGATGGG ACCTCTAGAC 
GAGCCGGTGG CCGTTCAGAA GTGGGCCCGT GGACCCAACC TGACGGCCAC TATAGTGTGG 
ATTGACCCAG CGCACATAGT AGCAGCGTCC TACGACATCA GCATAGATGT TGAGGCAGAA 
TACACGCAAT ACAAGCCCCC CCTTCAGCGC CCCCTCAGGC CTGGATTGTG GACGGTGCGG 
GTGCTGCGGT TGTGGGAGCG TGTAGCAGAA GCACGATTTC TGGTCATGCC TCTAGCCTTC 
AAGGGACGTG AGCCGTTGCG CACAGACCAC GGCTGGGTGC ACGCAGGTCC TCCGGGTAAC 
GTTTACCTAG AGCAAAGCTT CCAGCAGCTC GCCCATGTGT TAAAGCTGCC TCCAAGTGAG 
CCGGCCCTGC AGGAGGCACA GAAGAAGACC TCGCTGGTGG GGAAACCACT GGAGGCTTGG 
GTCGACAGCT CCGTGGGCGC TTTCTGGGTC ACTGGAGATA CTTGCTCCGA GCGCACCTCC 
TCCTGTCCCA CTATAGGACT CTGCTCCAAA ACCTCCTGGA GCTCCTTGTC TCCTGACCCC 
AAATCAGAAC TGGCACCTGT CAAAGCTAAC GGTCGCATTA GGTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_009298134.1
CDS2..2626
Translation

Target ORF information:

RefSeq Version XM_009299859.2
Organism Danio rerio(Zebrafish)
Definition Danio rerio xylosyltransferase II (xylt2), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_009299859.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
ATGCGAATGA TTCACGGGGG AAAGATGGTC GCGAGCACCC GTGTACAGAA GCTCCTCAGA 
CGGTATAAAC TCGTGATCGC GGCCGGTTTA ACGATCTTGC TGGTCCAGGG GCTGGTGGTA 
TGGAGCCTGC GGAGTCTTGA GGAGGGAGAG GCCGAGCGAA AGCACAGACG CTCAAAGTTG 
CCCGACCACA ATGGCCAGGA GCAGAATCTG GACCCTGCTA TCTTTGATTC TGGGGCAAAC 
CACGGTCAAT GGAGGCTGCG CCAGGACCAA CCCGCGGTCA CCGCTATCAT CAGGAGAGGG 
TCCAGACGGA GAAACAAGCC CCCTTTGAAG GACAAGAGTT TTGGCGGGCC TGAAGATGGA 
GTGGCGGTCG AAAAAGTCGC CCATTATGAT CCGTCAAGCA GCCGTAACTT CAGCGAGACG 
CGGGCAGGGG AAACGGCCAA AATCCATCTG GTGGCACCGG GAGAGCCTGG CAGCGTTGAA 
GGTGCCCCAC AGGTCCCGAG CAGTGACTTT GTGCCCAAAT GTGAGATCTC GGGCAAGGAT 
GCCCTGTCTG CCCTCCACCG CGCGGGTTCA CGGCAGTGCA GACAGGAGAT TGCCAACATC 
GTGTGCCAAC ACCAAGCAGG ACAGCTCATG CCTCAGTCTC TGCCTCAGTT TTGCCCACAG 
CATGTGATCT CCAGCGCCGT CCAGCATGTG GATTTTGCTG ATGCTGACCT CTCTAAGGTG 
GAGAACCCAG TCAGGGTTGT TTTTGTGCTG GTGGTTCACG GACGAGCAGT TCGACAGTTG 
AAGCGTCTCC TGAAAGCTAT ATATCACAAG GACCACTTTT ATTACATCCA CGTCGACAAG 
CGCTCCAACT ACATGCATCG GGAGGTGTTG AAGATGGCGG AGCTCTACCC CAATGTGAGA 
GCCACACCCT GGCGCATGGT GACCATCTGG GGTGGAGCCA GTCTGCTGAA GGCCTACCTG 
CGCAGCATGC ATGATCTGCT GTCCATGCTG GACTGGAAGT GGGACTTCTT TATCAACCTC 
AGTGCCACTG ACTTCCCCAC AAGGACCAAC GATGAGCTGG TGGCTTTTCT CTCCCAGAAC 
CGTGACAAGA ACTTCCTCAA GTCTCACGGC AGAGAGAACG CGAGGTTCAT TAAGAAGCAA 
GGTCTGGACC GCCTGTTTCA CGAGTGTGAC AACCACATGT GGCGTCTGGG TGAGCGCACC 
ATCCCCGAGG GACTGGAGGT GTCAGGAGGC TCGGACTGGT TTTCTCTCAC ACGGAAATTT 
GTGGAGTATG TGGTGAACTC GCAGGATGAG CTGGTGACAG GACTCAAGCA GTTCTACACC 
TACGCCCTTC TGCCTGCTGA GTCTTTCTTT CACACAGTGT TGGGAAACAG CCACATGTGT 
GATACTCTGG TGGACAATAA TCTCCGCGTG ACCAATTGGA ACCGGAAGTT GGGCTGCAAG 
TGTCAGTATA AGCATATAGT GGACTGGTGC GGCTGTTCAC CAAATGACTT CAAACCCTCA 
GACCTCATCA GAATACAGCA ACTAACTCGG CCTACATTCT TCGCCCGTAA GTTCGAGTCT 
ACAGTGAACC AGGAGGCTAT CGAGATCCTG GACAATCATC TGTATGGGCA GTACCCTCCT 
GGCACAGTGG CACTGAAAGC ATACTGGGAA AGCCTGTTTG AGCAGGCAGA TGGGGTCTCG 
TCCCTCAATG ATGTGGCCCT CACAGCGTAC TCCTCCTTTT TTAGACTGGG CCTCCGTAGG 
CAAGAGACCT CTCAAAGCAG TTCTGAGGCC TGCAGATTTG AACCCATTGG TTACCCCGTC 
TCAGTGCACC TGTATTTTTA TGATGACCGT TTCCAAGGAT ACCTGGTCAG GCAGGAGGTG 
CAGAATATGG TGACCAGGTC CCGTGAGATG CTGGAGGTGT GGGCTGTTCC TCAAGCAACC 
CTGCAGCTGG AACACAACCT TCATGAGTTT GAGCGCCTCA AACACCTCGA GGTTGGAACC 
GAATGGGACC CCAAGGAGCG AATCTTCCGC AACTTTGGTG GTGTGATGGG ACCTCTAGAC 
GAGCCGGTGG CCGTTCAGAA GTGGGCCCGT GGACCCAACC TGACGGCCAC TATAGTGTGG 
ATTGACCCAG CGCACATAGT AGCAGCGTCC TACGACATCA GCATAGATGT TGAGGCAGAA 
TACACGCAAT ACAAGCCCCC CCTTCAGCGC CCCCTCAGGC CTGGATTGTG GACGGTGCGG 
GTGCTGCGGT TGTGGGAGCG TGTAGCAGAA GCACGATTTC TGGTCATGCC TCTAGCCTTC 
AAGGGACGTG AGCCGTTGCG CACAGACCAC GGCTGGGTGC ACGCAGGTCC TCCGGGTAAC 
GTTTACCTAG AGCAAAGCTT CCAGCAGCTC GCCCATGTGT TAAAGCTGCC TCCAAGTGAG 
CCGGCCCTGC AGGAGGCACA GAAGAAGACC TCGCTGGTGG GGAAACCACT GGAGGCTTGG 
GTCGACAGCT CCGTGGGCGC TTTCTGGGTC ACTGGAGATA CTTGCTCCGA GCGCACCTCC 
TCCTGTCCCA CTATAGGACT CTGCTCCAAA ACCTCCTGGA GCTCCTTGTC TCCTGACCCC 
AAATCAGAAC TGGCACCTGT CAAAGCTAAC GGTCGCATTA GGTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J


book

Zebrafish Collagen Type I: Molecular and Biochemical Characterization of the Major Structural Protein in Bone and Skin.
Scientific reports621540(2016 Feb)
Gistelinck C,Gioia R,Gagliardi A,Tonelli F,Marchese L,Bianchi L,Landi C,Bini L,Huysseune A,Witten PE,Staes A,Gevaert K,De Rocker N,Menten B,Malfait F,Leikin S,Carra S,Tenni R,Rossi A,De Paepe A,Coucke P,Willaert A,Forlino A