Gene Symbol | pglyrp2 |
Entrez Gene ID | 568634 |
Full Name | peptidoglycan recognition protein 2 |
Synonyms | pgrp-l |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » pglyrp2 cDNA ORF clone
Gene Symbol | pglyrp2 |
Entrez Gene ID | 568634 |
Full Name | peptidoglycan recognition protein 2 |
Synonyms | pgrp-l |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_021476909.1 | XP_021332584.1 | peptidoglycan recognition protein 2 isoform X1 |
NM_001045166.1 | NP_001038631.1 | peptidoglycan recognition protein 2 |
PGLYRP2 | XP_001111934.2 | |
Anopheles gambiae (African malaria mosquito) | PGRPLB | XP_003435776.1 |
Homo sapiens (human) | PGLYRP2 | NP_443122.3 |
Pan troglodytes (chimpanzee) | PGLYRP2 | XP_001172199.1 |
Mus musculus (house mouse) | Pglyrp2 | NP_067294.2 |
Gallus gallus (chicken) | PGLYRP2 | NP_001038151.1 |
Danio rerio (zebrafish) | pglyrp6 | NP_001038687.1 |
Bos taurus (cattle) | PGLYRP2 | XP_005208628.1 |
Danio rerio (zebrafish) | pglyrp2 | NP_001038631.1 |
Canis lupus familiaris (dog) | PGLYRP2 | XP_852999.3 |
Rattus norvegicus (Norway rat) | Pglyrp2 | XP_006241155.1 |
Drosophila melanogaster (fruit fly) | PGRP-LB | NP_001247052.1 |
Xenopus tropicalis (tropical clawed frog) | pglyrp2 | NP_001106487.2 |
Re-evaluating the functional landscape of the cardiovascular system during development.
Takada N, Omae M, Sagawa F, Chi NC, Endo S, Kozawa S, Sato TN
Biology open6(11)1756-1770(2017 Nov)
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)
Zebrafish liver (ZFL) cells are able to mount an anti-viral response after stimulation with Poly (I:C).
Ruyra A, Torrealba D, Morera D, Tort L, MacKenzie S, Roher N
Comparative biochemistry and physiology. Part B, Biochemistry & molecular biology18255-63(2015 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
We identified and cloned three zebrafish Peptidoglycan recognition proteins, PGLYRP-2, PGLYRP-5, and PGLYRP-6, and showed that they are highly expressed in eggs, developing embryos, and adult tissues that contact external environment
Title: Zebrafish peptidoglycan recognition proteins are bactericidal amidases essential for defense against bacterial infections.
The following pglyrp2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the pglyrp2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa38705 | |
Clone ID Related Accession (Same CDS sequence) | NM_001045166.1 | |
Accession Version | NM_001045166.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1377bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-25 | |
Organism | Danio rerio(zebrafish) | |
Product | peptidoglycan recognition protein 2 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ447202.1. On Sep 1, 2006 this sequence version replaced XM_691972.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: DQ447202.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505371, SAMEA3505388 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCTGGAA TATGCATGCA GAGCTCAGCT GTGCATCTGA GGAACATGGA GCACTTTATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001038631.1 |
CDS | 1..1377 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001045166.1 |
1 | ATGGCTGGAA TATGCATGCA GAGCTCAGCT GTGCATCTGA GGAACATGGA GCACTTTATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa142979 | |
Clone ID Related Accession (Same CDS sequence) | XM_021476909.1 | |
Accession Version | XM_021476909.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1302bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | peptidoglycan recognition protein 2 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007117.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACACCAG GTGCATTATG GATTATGGTC ATGGCTGGAA TATGCATGCA GAGCTCAGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021332584.1 |
CDS | 354..1655 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021476909.1 |
1 | ATGACACCAG GTGCATTATG GATTATGGTC ATGGCTGGAA TATGCATGCA GAGCTCAGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Re-evaluating the functional landscape of the cardiovascular system during development. |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
RFX transcription factors are essential for hearing in mice. |
Zebrafish liver (ZFL) cells are able to mount an anti-viral response after stimulation with Poly (I:C). |