Gene Symbol | fdft1 |
Entrez Gene ID | 571911 |
Full Name | farnesyl-diphosphate farnesyltransferase 1 |
Synonyms | si:ch73-107c13.2 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » fdft1 cDNA ORF clone
gRNAs
Gene Symbol | fdft1 |
Entrez Gene ID | 571911 |
Full Name | farnesyl-diphosphate farnesyltransferase 1 |
Synonyms | si:ch73-107c13.2 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_021468511.1 | XP_021324186.1 | squalene synthase isoform X1 |
NM_001202525.1 | NP_001189454.1 | squalene synthase |
Canis lupus familiaris (dog) | FDFT1 | XP_534557.2 |
Neurospora crassa | NCU06054 | XP_959817.1 |
Oryza sativa (rice) | Os07g0200700 | NP_001059129.1 |
Danio rerio (zebrafish) | si:ch73-107c13.2 | NP_001189454.1 |
Eremothecium gossypii | AGOS_AFR444C | NP_985991.1 |
Homo sapiens (human) | FDFT1 | NP_001274671.1 |
Mus musculus (house mouse) | Fdft1 | NP_034321.2 |
Rattus norvegicus (Norway rat) | Fdft1 | NP_062111.1 |
Gallus gallus (chicken) | FDFT1 | NP_001034383.1 |
Schizosaccharomyces pombe (fission yeast) | erg9 | NP_595363.1 |
Arabidopsis thaliana (thale cress) | SQS2 | NP_195191.2 |
Oryza sativa (rice) | Os03g0805100 | NP_001051625.1 |
Pan troglodytes (chimpanzee) | FDFT1 | XP_001141492.1 |
FDFT1 | XP_001086419.1 | |
Bos taurus (cattle) | FDFT1 | NP_001013022.1 |
Saccharomyces cerevisiae (baker's yeast) | ERG9 | NP_012060.1 |
Kluyveromyces lactis | KLLA0D08866g | XP_453457.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_09239 | XP_003709863.1 |
Arabidopsis thaliana (thale cress) | SQS1 | NP_195190.1 |
Xenopus tropicalis (tropical clawed frog) | fdft1 | NP_001135642.2 |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
trappc11 is required for protein glycosylation in zebrafish and humans.
DeRossi C, Vacaru A, Rafiq R, Cinaroglu A, Imrie D, Nayar S, Baryshnikova A, Milev MP, Stanga D, Kadakia D, Gao N, Chu J, Freeze HH, Lehrman MA, Sacher M, Sadler KC
Molecular biology of the cell27(8)1220-34(2016 Apr)
The draft genome of the grass carp (Ctenopharyngodon idellus) provides insights into its evolution and vegetarian adaptation.
Wang Y, Lu Y, Zhang Y, Ning Z, Li Y, Zhao Q, Lu H, Huang R, Xia X, Feng Q, Liang X, Liu K, Zhang L, Lu T, Huang T, Fan D, Weng Q, Zhu C, Lu Y, Li W, Wen Z, Zhou C, Tian Q, Kang X, Shi M, Zhang W, Jang S, Du F, He S, Liao L, Li Y, Gui B, He H, Ning Z, Yang C, He L, Luo L, Yang R, Luo Q, Liu X, Li S, Huang W, Xiao L, Lin H, Han B, Zhu Z
Nature genetics47(6)625-31(2015 Jun)
Sex specific response in cholesterol level in zebrafish (Danio rerio) after long-term exposure of difenoconazole.
Mu X, Wang K, Chai T, Zhu L, Yang Y, Zhang J, Pang S, Wang C, Li X
Environmental pollution (Barking, Essex : 1987)197278-86(2015 Feb)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following fdft1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the fdft1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa01317 | |
Clone ID Related Accession (Same CDS sequence) | NM_001202525.1 | |
Accession Version | NM_001202525.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1257bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-03-23 | |
Organism | Danio rerio(zebrafish) | |
Product | squalene synthase | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CU207296.22. On Feb 3, 2011 this sequence version replaced XM_695555.3. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: GDQQ01007373.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGACATCG TCAAGTCTCT CGGACACCCG GAGGAGATTA TAAACCTCTT CAGATACAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001189454.1 |
CDS | 1..1257 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGACATCG TCAAGTCTCT CGGACACCCG GAGGAGATTA TAAACCTCTT CAGATACAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa150666 | |
Clone ID Related Accession (Same CDS sequence) | XM_021468511.1 | |
Accession Version | XM_021468511.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1344bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | squalene synthase isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007131.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGGAG TGTGCGGGAA GAGCGCGGTG TCGTTCTCCG TGCTGAAGCG GTCTCTGTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021324186.1 |
CDS | 405..1748 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTGGAG TGTGCGGGAA GAGCGCGGTG TCGTTCTCCG TGCTGAAGCG GTCTCTGTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
trappc11 is required for protein glycosylation in zebrafish and humans. |
The draft genome of the grass carp (Ctenopharyngodon idellus) provides insights into its evolution and vegetarian adaptation. |
Sex specific response in cholesterol level in zebrafish (Danio rerio) after long-term exposure of difenoconazole. |